RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 JPH4Q96JJ6 628 aa31.85■■■□□ 2.69
PDLIM7-205ENST00000393551 CUL7Q14999 1698 aa31.79■■■□□ 2.68
PDLIM7-205ENST00000393551 KIAA0586Q9BVV6 1533 aa31.7■■■□□ 2.67
PDLIM7-205ENST00000393551 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
PDLIM7-205ENST00000393551 KIF13AQ9H1H9 1805 aa31.52■■■□□ 2.64
PDLIM7-205ENST00000393551 ADCY10Q96PN6 1610 aa31.51■■■□□ 2.63
PDLIM7-205ENST00000393551 IQGAP2Q13576 1575 aa31.43■■■□□ 2.62
PDLIM7-205ENST00000393551 MAPKBP1O60336 1514 aa31.39■■■□□ 2.62
PDLIM7-205ENST00000393551 RAPGEF2Q9Y4G8 1499 aa31.39■■■□□ 2.62
PDLIM7-205ENST00000393551 PTPRGP23470 1445 aa31.36■■■□□ 2.61
PDLIM7-205ENST00000393551 ABCC10Q5T3U5 1492 aa31.35■■■□□ 2.61
PDLIM7-205ENST00000393551 NPM1P06748 294 aaKnown RBP eCLIP31.35■■■□□ 2.61
PDLIM7-205ENST00000393551 CARMIL2Q6F5E8 1435 aa31.32■■■□□ 2.61
PDLIM7-205ENST00000393551 DISP1Q96F81 1524 aa31.32■■■□□ 2.6
PDLIM7-205ENST00000393551 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
PDLIM7-205ENST00000393551 DIP2BQ9P265 1576 aa31.3■■■□□ 2.6
PDLIM7-205ENST00000393551 TTBK1Q5TCY1 1321 aaPredicted RBP31.28■■■□□ 2.6
PDLIM7-205ENST00000393551 FAM69CQ0P6D2 419 aa31.28■■■□□ 2.6
PDLIM7-205ENST00000393551 UGGT2Q9NYU1 1516 aa31.25■■■□□ 2.59
PDLIM7-205ENST00000393551 ABCC2Q92887 1545 aa31.19■■■□□ 2.58
PDLIM7-205ENST00000393551 KIAA0556O60303 1618 aa31.16■■■□□ 2.58
PDLIM7-205ENST00000393551 UHRF1BP1LA0JNW5 1464 aa31.15■■■□□ 2.58
PDLIM7-205ENST00000393551 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
PDLIM7-205ENST00000393551 CTTNBP2Q8WZ74 1663 aa31.15■■■□□ 2.58
PDLIM7-205ENST00000393551 UACAQ9BZF9 1416 aa31.14■■■□□ 2.58
PDLIM7-205ENST00000393551 TSPOAP1O95153 1857 aa31.08■■■□□ 2.57
PDLIM7-205ENST00000393551 ASXL2Q76L83 1435 aa31.07■■■□□ 2.56
PDLIM7-205ENST00000393551 KDM5BQ9UGL1 1544 aa31.03■■■□□ 2.56
PDLIM7-205ENST00000393551 PLB1Q6P1J6 1458 aa31.01■■■□□ 2.56
PDLIM7-205ENST00000393551 ZCCHC11Q5TAX3 1644 aaKnown RBP30.98■■■□□ 2.55
PDLIM7-205ENST00000393551 GLI2P10070 1586 aa30.96■■■□□ 2.55
PDLIM7-205ENST00000393551 PPRC1Q5VV67 1664 aaKnown RBP30.94■■■□□ 2.54
PDLIM7-205ENST00000393551 GOLGA3Q08378 1498 aa30.94■■■□□ 2.54
PDLIM7-205ENST00000393551 KDM6BO15054 1643 aa30.93■■■□□ 2.54
PDLIM7-205ENST00000393551 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
PDLIM7-205ENST00000393551 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
PDLIM7-205ENST00000393551 EPRSP07814 1512 aaKnown RBP30.89■■■□□ 2.54
PDLIM7-205ENST00000393551 ABCA8O94911 1581 aa30.88■■■□□ 2.53
PDLIM7-205ENST00000393551 MAP3K4Q9Y6R4 1608 aa30.83■■■□□ 2.53
PDLIM7-205ENST00000393551 WDR7Q9Y4E6 1490 aa30.78■■■□□ 2.52
PDLIM7-205ENST00000393551 EEA1Q15075 1411 aa30.77■■■□□ 2.52
PDLIM7-205ENST00000393551 P3H3Q8IVL6 736 aa30.75■■■□□ 2.51
PDLIM7-205ENST00000393551 SAMD9Q5K651 1589 aa30.74■■■□□ 2.51
PDLIM7-205ENST00000393551 COL17A1Q9UMD9 1497 aaPredicted RBP30.72■■■□□ 2.51
PDLIM7-205ENST00000393551 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
PDLIM7-205ENST00000393551 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
PDLIM7-205ENST00000393551 ATP10BO94823 1461 aa30.63■■■□□ 2.49
PDLIM7-205ENST00000393551 KDM4FA0A1W2PPD8 638 aa30.62■■■□□ 2.49
PDLIM7-205ENST00000393551 KCNH8Q96L42 1107 aa30.62■■■□□ 2.49
PDLIM7-205ENST00000393551 ARID3CA6NKF2 412 aa30.61■■■□□ 2.49
PDLIM7-205ENST00000393551 CFAP43Q8NDM7 1665 aa30.59■■■□□ 2.49
PDLIM7-205ENST00000393551 KIF21BO75037 1637 aa30.58■■■□□ 2.49
PDLIM7-205ENST00000393551 CD109Q6YHK3 1445 aa30.56■■■□□ 2.48
PDLIM7-205ENST00000393551 RAPGEF6Q8TEU7 1601 aa30.55■■■□□ 2.48
PDLIM7-205ENST00000393551 RANGAP1P46060 587 aaPredicted RBP30.55■■■□□ 2.48
PDLIM7-205ENST00000393551 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
PDLIM7-205ENST00000393551 MAGI3Q5TCQ9 1506 aa30.55■■■□□ 2.48
PDLIM7-205ENST00000393551 FHOD3Q2V2M9 1422 aa30.52■■■□□ 2.48
PDLIM7-205ENST00000393551 NUP153P49790 1475 aaKnown RBP30.48■■■□□ 2.47
PDLIM7-205ENST00000393551 ABCA9Q8IUA7 1624 aa30.42■■■□□ 2.46
PDLIM7-205ENST00000393551 EFCAB5A4FU69 1503 aa30.4■■■□□ 2.46
PDLIM7-205ENST00000393551 ADGRL1O94910 1474 aa30.37■■■□□ 2.45
PDLIM7-205ENST00000393551 EHMT2Q96KQ7 1210 aa30.36■■■□□ 2.45
PDLIM7-205ENST00000393551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.34■■■□□ 2.45
PDLIM7-205ENST00000393551 HNRNPUL2Q1KMD3 747 aaKnown RBP30.34■■■□□ 2.45
PDLIM7-205ENST00000393551 ARAP3Q8WWN8 1544 aa30.32■■■□□ 2.44
PDLIM7-205ENST00000393551 UBTFP17480 764 aaKnown RBP30.29■■■□□ 2.44
PDLIM7-205ENST00000393551 ARHGAP35Q9NRY4 1499 aa30.23■■■□□ 2.43
PDLIM7-205ENST00000393551 PHLDB1Q86UU1 1377 aa30.21■■■□□ 2.43
PDLIM7-205ENST00000393551 PLEKHD1A6NEE1 506 aa30.21■■■□□ 2.43
PDLIM7-205ENST00000393551 NEO1Q92859 1461 aa30.2■■■□□ 2.43
PDLIM7-205ENST00000393551 CDK13Q14004 1512 aaKnown RBP30.2■■■□□ 2.42
PDLIM7-205ENST00000393551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.17■■■□□ 2.422e-7■■□□□ 13
PDLIM7-205ENST00000393551 RAPGEF3O95398 923 aa30.15■■■□□ 2.42
PDLIM7-205ENST00000393551 FRMPD1Q5SYB0 1578 aa30.13■■■□□ 2.41
PDLIM7-205ENST00000393551 TTC37Q6PGP7 1564 aa30.12■■■□□ 2.41
PDLIM7-205ENST00000393551 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
PDLIM7-205ENST00000393551 HECW1Q76N89 1606 aa30.07■■■□□ 2.4
PDLIM7-205ENST00000393551 FANCAO15360 1455 aa30.04■■■□□ 2.4
PDLIM7-205ENST00000393551 AKNAQ7Z591 1439 aa30.03■■■□□ 2.4
PDLIM7-205ENST00000393551 RICTORQ6R327 1708 aa30.02■■■□□ 2.4
PDLIM7-205ENST00000393551 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
PDLIM7-205ENST00000393551 ATP1B4Q9UN42 357 aaPredicted RBP30.02■■■□□ 2.4
PDLIM7-205ENST00000393551 CFAP74Q9C0B2 1584 aa29.98■■■□□ 2.39
PDLIM7-205ENST00000393551 DENND4BO75064 1496 aaPredicted RBP29.98■■■□□ 2.39
PDLIM7-205ENST00000393551 PLCH2O75038 1416 aa29.95■■■□□ 2.38
PDLIM7-205ENST00000393551 KIF14Q15058 1648 aa29.94■■■□□ 2.38
PDLIM7-205ENST00000393551 ADAMTSL3P82987 1691 aa29.93■■■□□ 2.38
PDLIM7-205ENST00000393551 ARHGEF40Q8TER5 1519 aa29.91■■■□□ 2.38
PDLIM7-205ENST00000393551 HECW2Q9P2P5 1572 aa29.9■■■□□ 2.38
PDLIM7-205ENST00000393551 TROQ12816 1431 aaPredicted RBP29.88■■■□□ 2.37
PDLIM7-205ENST00000393551 ZMYM4Q5VZL5 1548 aa29.88■■■□□ 2.37
PDLIM7-205ENST00000393551 CDK11AQ9UQ88 783 aaPredicted RBP29.88■■■□□ 2.37
PDLIM7-205ENST00000393551 PCF11O94913 1555 aaKnown RBP29.88■■■□□ 2.37
PDLIM7-205ENST00000393551 MYO5CQ9NQX4 1742 aa29.88■■■□□ 2.37
PDLIM7-205ENST00000393551 BCORL1Q5H9F3 1711 aa29.87■■■□□ 2.37
PDLIM7-205ENST00000393551 CASKIN1Q8WXD9 1431 aa29.85■■■□□ 2.37
PDLIM7-205ENST00000393551 SCAPERQ9BY12 1400 aa29.83■■■□□ 2.37
PDLIM7-205ENST00000393551 YEATS2Q9ULM3 1422 aa29.83■■■□□ 2.37
PDLIM7-205ENST00000393551 SIGLEC1Q9BZZ2 1709 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms