RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 JPH4Q96JJ6 628 aa31.68■■■□□ 2.66
PDLIM7-204ENST00000393546 KIAA0586Q9BVV6 1533 aa31.66■■■□□ 2.66
PDLIM7-204ENST00000393546 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
PDLIM7-204ENST00000393546 FAM9AQ8IZU1 332 aaPredicted RBP31.64■■■□□ 2.66
PDLIM7-204ENST00000393546 SHROOM2Q13796 1616 aa31.62■■■□□ 2.65
PDLIM7-204ENST00000393546 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
PDLIM7-204ENST00000393546 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
PDLIM7-204ENST00000393546 PRG4Q92954 1404 aaPredicted RBP31.57■■■□□ 2.64
PDLIM7-204ENST00000393546 ERCC6L2Q5T890 1561 aa31.52■■■□□ 2.64
PDLIM7-204ENST00000393546 IQGAP2Q13576 1575 aa31.47■■■□□ 2.63
PDLIM7-204ENST00000393546 CTTNBP2Q8WZ74 1663 aa31.37■■■□□ 2.61
PDLIM7-204ENST00000393546 CARMIL2Q6F5E8 1435 aa31.36■■■□□ 2.61
PDLIM7-204ENST00000393546 KIF21BO75037 1637 aa31.31■■■□□ 2.6
PDLIM7-204ENST00000393546 UGGT2Q9NYU1 1516 aa31.3■■■□□ 2.6
PDLIM7-204ENST00000393546 DISP1Q96F81 1524 aa31.24■■■□□ 2.59
PDLIM7-204ENST00000393546 TNIKQ9UKE5 1360 aa31.24■■■□□ 2.59
PDLIM7-204ENST00000393546 PTPRGP23470 1445 aa31.23■■■□□ 2.59
PDLIM7-204ENST00000393546 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
PDLIM7-204ENST00000393546 TTBK1Q5TCY1 1321 aaPredicted RBP31.21■■■□□ 2.59
PDLIM7-204ENST00000393546 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
PDLIM7-204ENST00000393546 GOLGA3Q08378 1498 aa31.19■■■□□ 2.58
PDLIM7-204ENST00000393546 KIAA0556O60303 1618 aa31.15■■■□□ 2.58
PDLIM7-204ENST00000393546 RANGAP1P46060 587 aaPredicted RBP31.08■■■□□ 2.57
PDLIM7-204ENST00000393546 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.56
PDLIM7-204ENST00000393546 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
PDLIM7-204ENST00000393546 ADCY10Q96PN6 1610 aa31■■■□□ 2.55
PDLIM7-204ENST00000393546 TRHP20396 242 aaPredicted RBP31■■■□□ 2.55
PDLIM7-204ENST00000393546 UACAQ9BZF9 1416 aa30.99■■■□□ 2.55
PDLIM7-204ENST00000393546 SAMD9Q5K651 1589 aa30.97■■■□□ 2.55
PDLIM7-204ENST00000393546 UHRF1BP1LA0JNW5 1464 aa30.94■■■□□ 2.54
PDLIM7-204ENST00000393546 ABCC2Q92887 1545 aa30.89■■■□□ 2.54
PDLIM7-204ENST00000393546 EFCAB5A4FU69 1503 aa30.88■■■□□ 2.53
PDLIM7-204ENST00000393546 PLB1Q6P1J6 1458 aa30.86■■■□□ 2.53
PDLIM7-204ENST00000393546 FHOD3Q2V2M9 1422 aa30.84■■■□□ 2.53
PDLIM7-204ENST00000393546 ABCA8O94911 1581 aa30.81■■■□□ 2.52
PDLIM7-204ENST00000393546 MAPKBP1O60336 1514 aa30.8■■■□□ 2.52
PDLIM7-204ENST00000393546 KDM5BQ9UGL1 1544 aa30.78■■■□□ 2.52
PDLIM7-204ENST00000393546 ARHGAP35Q9NRY4 1499 aa30.75■■■□□ 2.51
PDLIM7-204ENST00000393546 ZCCHC11Q5TAX3 1644 aaKnown RBP30.69■■■□□ 2.5
PDLIM7-204ENST00000393546 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
PDLIM7-204ENST00000393546 ASXL2Q76L83 1435 aa30.69■■■□□ 2.5
PDLIM7-204ENST00000393546 FAM69CQ0P6D2 419 aa30.68■■■□□ 2.5
PDLIM7-204ENST00000393546 RAPGEF6Q8TEU7 1601 aa30.68■■■□□ 2.5
PDLIM7-204ENST00000393546 ABCC10Q5T3U5 1492 aa30.68■■■□□ 2.5
PDLIM7-204ENST00000393546 ARID3CA6NKF2 412 aa30.64■■■□□ 2.5
PDLIM7-204ENST00000393546 CLIP1P30622 1438 aa30.64■■■□□ 2.49
PDLIM7-204ENST00000393546 FMN1Q68DA7 1419 aa30.64■■■□□ 2.49
PDLIM7-204ENST00000393546 ATP10BO94823 1461 aa30.61■■■□□ 2.49
PDLIM7-204ENST00000393546 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
PDLIM7-204ENST00000393546 DIP2BQ9P265 1576 aa30.58■■■□□ 2.49
PDLIM7-204ENST00000393546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.58■■■□□ 2.49
PDLIM7-204ENST00000393546 HNRNPUL2Q1KMD3 747 aaKnown RBP30.58■■■□□ 2.49
PDLIM7-204ENST00000393546 NUP153P49790 1475 aaKnown RBP30.57■■■□□ 2.48
PDLIM7-204ENST00000393546 ATP1B4Q9UN42 357 aaPredicted RBP30.55■■■□□ 2.48
PDLIM7-204ENST00000393546 WDR7Q9Y4E6 1490 aa30.53■■■□□ 2.48
PDLIM7-204ENST00000393546 CEP162Q5TB80 1403 aa30.5■■■□□ 2.47
PDLIM7-204ENST00000393546 KCNH8Q96L42 1107 aa30.5■■■□□ 2.47
PDLIM7-204ENST00000393546 EPRSP07814 1512 aaKnown RBP30.49■■■□□ 2.47
PDLIM7-204ENST00000393546 GLI2P10070 1586 aa30.47■■■□□ 2.47
PDLIM7-204ENST00000393546 PLEKHD1A6NEE1 506 aa30.44■■■□□ 2.46
PDLIM7-204ENST00000393546 HECW1Q76N89 1606 aa30.44■■■□□ 2.46
PDLIM7-204ENST00000393546 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.46
PDLIM7-204ENST00000393546 TSPOAP1O95153 1857 aa30.38■■■□□ 2.45
PDLIM7-204ENST00000393546 CDK13Q14004 1512 aaKnown RBP30.37■■■□□ 2.45
PDLIM7-204ENST00000393546 CDK11AQ9UQ88 783 aaPredicted RBP30.35■■■□□ 2.45
PDLIM7-204ENST00000393546 PCF11O94913 1555 aaKnown RBP30.32■■■□□ 2.45
PDLIM7-204ENST00000393546 MAP3K4Q9Y6R4 1608 aa30.31■■■□□ 2.44
PDLIM7-204ENST00000393546 FYCO1Q9BQS8 1478 aa30.31■■■□□ 2.44
PDLIM7-204ENST00000393546 CD109Q6YHK3 1445 aa30.29■■■□□ 2.44
PDLIM7-204ENST00000393546 CFAP43Q8NDM7 1665 aa30.27■■■□□ 2.44
PDLIM7-204ENST00000393546 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.44
PDLIM7-204ENST00000393546 LRRIQ1Q96JM4 1722 aa30.24■■■□□ 2.43
PDLIM7-204ENST00000393546 TEX14Q8IWB6 1497 aa30.22■■■□□ 2.43
PDLIM7-204ENST00000393546 PPRC1Q5VV67 1664 aaKnown RBP30.22■■■□□ 2.43
PDLIM7-204ENST00000393546 ABCA9Q8IUA7 1624 aa30.2■■■□□ 2.43
PDLIM7-204ENST00000393546 MAGI3Q5TCQ9 1506 aa30.19■■■□□ 2.42
PDLIM7-204ENST00000393546 TROQ12816 1431 aaPredicted RBP30.16■■■□□ 2.42
PDLIM7-204ENST00000393546 VPS8Q8N3P4 1428 aa30.13■■■□□ 2.41
PDLIM7-204ENST00000393546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.412e-7■■□□□ 14.3
PDLIM7-204ENST00000393546 KDM6BO15054 1643 aa30.1■■■□□ 2.41
PDLIM7-204ENST00000393546 KIF14Q15058 1648 aa30.04■■■□□ 2.4
PDLIM7-204ENST00000393546 TTC37Q6PGP7 1564 aa30.03■■■□□ 2.4
PDLIM7-204ENST00000393546 PHLDB1Q86UU1 1377 aa30.03■■■□□ 2.4
PDLIM7-204ENST00000393546 MTUS2Q5JR59 1369 aa30.01■■■□□ 2.39
PDLIM7-204ENST00000393546 NEO1Q92859 1461 aa29.99■■■□□ 2.39
PDLIM7-204ENST00000393546 PLCH2O75038 1416 aa29.98■■■□□ 2.39
PDLIM7-204ENST00000393546 COL17A1Q9UMD9 1497 aaPredicted RBP29.98■■■□□ 2.39
PDLIM7-204ENST00000393546 FANCAO15360 1455 aa29.93■■■□□ 2.38
PDLIM7-204ENST00000393546 EFCAB2Q5VUJ9 269 aa29.93■■■□□ 2.38
PDLIM7-204ENST00000393546 ARAP3Q8WWN8 1544 aa29.92■■■□□ 2.38
PDLIM7-204ENST00000393546 MYO5CQ9NQX4 1742 aa29.92■■■□□ 2.38
PDLIM7-204ENST00000393546 APLP2Q06481 763 aa29.91■■■□□ 2.38
PDLIM7-204ENST00000393546 CFAP74Q9C0B2 1584 aa29.9■■■□□ 2.38
PDLIM7-204ENST00000393546 AKNAQ7Z591 1439 aa29.9■■■□□ 2.38
PDLIM7-204ENST00000393546 TIAM1Q13009 1591 aa29.9■■■□□ 2.38
PDLIM7-204ENST00000393546 EHBP1L1Q8N3D4 1523 aa29.88■■■□□ 2.37
PDLIM7-204ENST00000393546 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
PDLIM7-204ENST00000393546 ARHGAP5Q13017 1502 aa29.84■■■□□ 2.37
PDLIM7-204ENST00000393546 RAPGEF3O95398 923 aa29.83■■■□□ 2.37
PDLIM7-204ENST00000393546 CCNB3Q8WWL7 1395 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms