RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
NPHP1-203ENST00000393272 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
NPHP1-203ENST00000393272 IL27Q8NEV9 243 aa9.99□□□□□ -0.81
NPHP1-203ENST00000393272 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
NPHP1-203ENST00000393272 RTN4Q9NQC3 1192 aaKnown RBP9.97□□□□□ -0.81
NPHP1-203ENST00000393272 RAB3GAP2Q9H2M9 1393 aa9.97□□□□□ -0.81
NPHP1-203ENST00000393272 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.81
NPHP1-203ENST00000393272 SYNJ1O43426 1573 aa9.96□□□□□ -0.81
NPHP1-203ENST00000393272 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.96□□□□□ -0.82
NPHP1-203ENST00000393272 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
NPHP1-203ENST00000393272 PPP4R2Q9NY27 417 aa9.95□□□□□ -0.82
NPHP1-203ENST00000393272 UBE2Q2Q8WVN8 375 aa9.95□□□□□ -0.82
NPHP1-203ENST00000393272 ARAP1Q96P48 1450 aa9.94□□□□□ -0.82
NPHP1-203ENST00000393272 SIN3AQ96ST3 1273 aa9.93□□□□□ -0.82
NPHP1-203ENST00000393272 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
NPHP1-203ENST00000393272 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
NPHP1-203ENST00000393272 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
NPHP1-203ENST00000393272 IPO9Q96P70 1041 aaKnown RBP9.87□□□□□ -0.83
NPHP1-203ENST00000393272 SETD5Q9C0A6 1442 aa9.86□□□□□ -0.83
NPHP1-203ENST00000393272 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
NPHP1-203ENST00000393272 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-203ENST00000393272 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
NPHP1-203ENST00000393272 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
NPHP1-203ENST00000393272 ERICH3Q5RHP9 1530 aa9.82□□□□□ -0.84
NPHP1-203ENST00000393272 CCDC184Q52MB2 194 aa9.79□□□□□ -0.84
NPHP1-203ENST00000393272 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
NPHP1-203ENST00000393272 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
NPHP1-203ENST00000393272 EIF5BO60841 1220 aaKnown RBP9.77□□□□□ -0.84
NPHP1-203ENST00000393272 NEFMP07197 916 aa9.77□□□□□ -0.84
NPHP1-203ENST00000393272 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
NPHP1-203ENST00000393272 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
NPHP1-203ENST00000393272 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
NPHP1-203ENST00000393272 TONSLQ96HA7 1378 aa9.76□□□□□ -0.85
NPHP1-203ENST00000393272 BRPF3Q9ULD4 1205 aa9.76□□□□□ -0.85
NPHP1-203ENST00000393272 ARHGAP35Q9NRY4 1499 aa9.76□□□□□ -0.85
NPHP1-203ENST00000393272 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
NPHP1-203ENST00000393272 FAM9BQ8IZU0 186 aa9.75□□□□□ -0.85
NPHP1-203ENST00000393272 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
NPHP1-203ENST00000393272 TIAM1Q13009 1591 aa9.74□□□□□ -0.85
NPHP1-203ENST00000393272 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
NPHP1-203ENST00000393272 AKNAQ7Z591 1439 aa9.74□□□□□ -0.85
NPHP1-203ENST00000393272 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
NPHP1-203ENST00000393272 USP35Q9P2H5 1018 aa9.74□□□□□ -0.85
NPHP1-203ENST00000393272 TOP2BQ02880 1626 aa9.74□□□□□ -0.85
NPHP1-203ENST00000393272 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
NPHP1-203ENST00000393272 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
NPHP1-203ENST00000393272 MRS2Q9HD23 443 aa9.7□□□□□ -0.86
NPHP1-203ENST00000393272 NCOA2Q15596 1464 aa9.7□□□□□ -0.86
NPHP1-203ENST00000393272 LRRC9Q6ZRR7 1453 aa9.7□□□□□ -0.86
NPHP1-203ENST00000393272 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
NPHP1-203ENST00000393272 KDM5BQ9UGL1 1544 aa9.7□□□□□ -0.86
NPHP1-203ENST00000393272 PKNOX2Q96KN3 472 aa9.69□□□□□ -0.86
NPHP1-203ENST00000393272 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
NPHP1-203ENST00000393272 BIVM-ERCC5R4GMW8 1640 aa9.68□□□□□ -0.86
NPHP1-203ENST00000393272 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
NPHP1-203ENST00000393272 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
NPHP1-203ENST00000393272 HSPA5P11021 654 aaKnown RBP9.68□□□□□ -0.86
NPHP1-203ENST00000393272 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
NPHP1-203ENST00000393272 GSE1Q14687 1217 aa9.67□□□□□ -0.86
NPHP1-203ENST00000393272 PPM1GO15355 546 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-203ENST00000393272 PHF23Q9BUL5 403 aaPredicted RBP9.66□□□□□ -0.86
NPHP1-203ENST00000393272 UNC13AQ9UPW8 1703 aa9.64□□□□□ -0.87
NPHP1-203ENST00000393272 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
NPHP1-203ENST00000393272 CCDC18Q5T9S5 1454 aa9.64□□□□□ -0.87
NPHP1-203ENST00000393272 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
NPHP1-203ENST00000393272 PDE4AP27815 886 aa9.63□□□□□ -0.87
NPHP1-203ENST00000393272 FRAT1Q92837 279 aaPredicted RBP9.63□□□□□ -0.87
NPHP1-203ENST00000393272 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
NPHP1-203ENST00000393272 UACAQ9BZF9 1416 aa9.62□□□□□ -0.87
NPHP1-203ENST00000393272 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPHP1-203ENST00000393272 CCDC7Q96M83 1385 aa9.61□□□□□ -0.87
NPHP1-203ENST00000393272 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
NPHP1-203ENST00000393272 TCERG1O14776 1098 aaKnown RBP9.6□□□□□ -0.87
NPHP1-203ENST00000393272 NFKBIBQ15653 356 aa9.6□□□□□ -0.87
NPHP1-203ENST00000393272 NCOA1Q15788 1441 aa9.6□□□□□ -0.87
NPHP1-203ENST00000393272 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
NPHP1-203ENST00000393272 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
NPHP1-203ENST00000393272 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
NPHP1-203ENST00000393272 PCF11O94913 1555 aaKnown RBP9.59□□□□□ -0.87
NPHP1-203ENST00000393272 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
NPHP1-203ENST00000393272 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
NPHP1-203ENST00000393272 HFM1A2PYH4 1435 aa9.58□□□□□ -0.88
NPHP1-203ENST00000393272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.57□□□□□ -0.88
NPHP1-203ENST00000393272 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
NPHP1-203ENST00000393272 EXOC6Q8TAG9 804 aa9.56□□□□□ -0.88
NPHP1-203ENST00000393272 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
NPHP1-203ENST00000393272 CUX1P39880 1505 aa9.55□□□□□ -0.88
NPHP1-203ENST00000393272 ABCA5Q8WWZ7 1642 aa9.55□□□□□ -0.88
NPHP1-203ENST00000393272 MS4A1P11836 297 aa9.55□□□□□ -0.88
NPHP1-203ENST00000393272 SLC4A3P48751 1232 aa9.55□□□□□ -0.88
NPHP1-203ENST00000393272 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
NPHP1-203ENST00000393272 POLR1AO95602 1720 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-203ENST00000393272 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
NPHP1-203ENST00000393272 FGD6Q6ZV73 1430 aa9.54□□□□□ -0.88
NPHP1-203ENST00000393272 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
NPHP1-203ENST00000393272 NAIPQ13075 1403 aa9.54□□□□□ -0.88
NPHP1-203ENST00000393272 KIF7Q2M1P5 1343 aa9.53□□□□□ -0.88
NPHP1-203ENST00000393272 RRP1P56182 461 aaKnown RBP9.53□□□□□ -0.88
NPHP1-203ENST00000393272 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
NPHP1-203ENST00000393272 GLIPR1L2Q4G1C9 344 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms