RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 NUP160Q12769 1436 aa5.65□□□□□ -1.5
ATP2B1-203ENST00000393164 LOC105371045A0A1W2PR82 267 aa5.65□□□□□ -1.51
ATP2B1-203ENST00000393164 CHD1O14646 1710 aa5.63□□□□□ -1.51
ATP2B1-203ENST00000393164 IQGAP2Q13576 1575 aa5.63□□□□□ -1.51
ATP2B1-203ENST00000393164 CARMIL2Q6F5E8 1435 aa5.63□□□□□ -1.51
ATP2B1-203ENST00000393164 JPH4Q96JJ6 628 aa5.62□□□□□ -1.51
ATP2B1-203ENST00000393164 CTTNBP2Q8WZ74 1663 aa5.62□□□□□ -1.51
ATP2B1-203ENST00000393164 CEP170Q5SW79 1584 aa5.61□□□□□ -1.51
ATP2B1-203ENST00000393164 CLIP1P30622 1438 aa5.61□□□□□ -1.51
ATP2B1-203ENST00000393164 RANGAP1P46060 587 aaPredicted RBP5.61□□□□□ -1.51
ATP2B1-203ENST00000393164 CEP162Q5TB80 1403 aa5.61□□□□□ -1.51
ATP2B1-203ENST00000393164 EFCAB5A4FU69 1503 aa5.6□□□□□ -1.51
ATP2B1-203ENST00000393164 UGGT2Q9NYU1 1516 aa5.6□□□□□ -1.51
ATP2B1-203ENST00000393164 CLASP1Q7Z460 1538 aa5.59□□□□□ -1.51
ATP2B1-203ENST00000393164 PRG4Q92954 1404 aaPredicted RBP5.59□□□□□ -1.52
ATP2B1-203ENST00000393164 FMN1Q68DA7 1419 aa5.58□□□□□ -1.52
ATP2B1-203ENST00000393164 APLP2Q06481 763 aa5.57□□□□□ -1.52
ATP2B1-203ENST00000393164 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
ATP2B1-203ENST00000393164 SHROOM2Q13796 1616 aa5.56□□□□□ -1.52
ATP2B1-203ENST00000393164 ARHGAP35Q9NRY4 1499 aa5.56□□□□□ -1.52
ATP2B1-203ENST00000393164 PTPRGP23470 1445 aa5.56□□□□□ -1.52
ATP2B1-203ENST00000393164 SAMD9Q5K651 1589 aa5.56□□□□□ -1.52
ATP2B1-203ENST00000393164 KIAA0556O60303 1618 aa5.55□□□□□ -1.52
ATP2B1-203ENST00000393164 DISP1Q96F81 1524 aa5.55□□□□□ -1.52
ATP2B1-203ENST00000393164 FHOD3Q2V2M9 1422 aa5.55□□□□□ -1.52
ATP2B1-203ENST00000393164 TTBK1Q5TCY1 1321 aaPredicted RBP5.54□□□□□ -1.52
ATP2B1-203ENST00000393164 VPS8Q8N3P4 1428 aa5.54□□□□□ -1.52
ATP2B1-203ENST00000393164 ATP1B4Q9UN42 357 aaPredicted RBP5.53□□□□□ -1.52
ATP2B1-203ENST00000393164 ARAP1Q96P48 1450 aa5.53□□□□□ -1.52
ATP2B1-203ENST00000393164 ARHGEF11O15085 1522 aa5.53□□□□□ -1.52
ATP2B1-203ENST00000393164 NPM1P06748 294 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATP2B1-203ENST00000393164 CDK11AQ9UQ88 783 aaPredicted RBP5.52□□□□□ -1.53
ATP2B1-203ENST00000393164 CASKIN1Q8WXD9 1431 aa5.52□□□□□ -1.53
ATP2B1-203ENST00000393164 UACAQ9BZF9 1416 aa5.52□□□□□ -1.53
ATP2B1-203ENST00000393164 FYCO1Q9BQS8 1478 aa5.51□□□□□ -1.53
ATP2B1-203ENST00000393164 AEBP2Q6ZN18 517 aaPredicted RBP5.51□□□□□ -1.53
ATP2B1-203ENST00000393164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.51□□□□□ -1.53
ATP2B1-203ENST00000393164 HNRNPUL2Q1KMD3 747 aaKnown RBP5.51□□□□□ -1.53
ATP2B1-203ENST00000393164 CCDC18Q5T9S5 1454 aa5.5□□□□□ -1.53
ATP2B1-203ENST00000393164 HECW1Q76N89 1606 aa5.5□□□□□ -1.53
ATP2B1-203ENST00000393164 CYB5RLQ6IPT4 315 aa5.5□□□□□ -1.53
ATP2B1-203ENST00000393164 UHRF1BP1LA0JNW5 1464 aa5.49□□□□□ -1.53
ATP2B1-203ENST00000393164 ERCC6L2Q5T890 1561 aa5.49□□□□□ -1.53
ATP2B1-203ENST00000393164 RAPGEF6Q8TEU7 1601 aa5.49□□□□□ -1.53
ATP2B1-203ENST00000393164 ABCC2Q92887 1545 aa5.49□□□□□ -1.53
ATP2B1-203ENST00000393164 PLB1Q6P1J6 1458 aa5.49□□□□□ -1.53
ATP2B1-203ENST00000393164 RIMBP3CA6NJZ7 1639 aa5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 RIMBP3BA6NNM3 1639 aa5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 RIMBP3Q9UFD9 1639 aa5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 ABCA8O94911 1581 aa5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 PCF11O94913 1555 aaKnown RBP5.48□□□□□ -1.53
ATP2B1-203ENST00000393164 MAP3K1Q13233 1512 aa5.47□□□□□ -1.53
ATP2B1-203ENST00000393164 NUP153P49790 1475 aaKnown RBP5.47□□□□□ -1.53
ATP2B1-203ENST00000393164 EPRSP07814 1512 aaKnown RBP5.47□□□□□ -1.53
ATP2B1-203ENST00000393164 MTUS2Q5JR59 1369 aa5.47□□□□□ -1.53
ATP2B1-203ENST00000393164 ARID3CA6NKF2 412 aa5.46□□□□□ -1.54
ATP2B1-203ENST00000393164 KDM5BQ9UGL1 1544 aa5.46□□□□□ -1.54
ATP2B1-203ENST00000393164 ATP10BO94823 1461 aa5.45□□□□□ -1.54
ATP2B1-203ENST00000393164 TIAM1Q13009 1591 aa5.45□□□□□ -1.54
ATP2B1-203ENST00000393164 ADCY10Q96PN6 1610 aa5.44□□□□□ -1.54
ATP2B1-203ENST00000393164 TROQ12816 1431 aaPredicted RBP5.44□□□□□ -1.54
ATP2B1-203ENST00000393164 EHBP1L1Q8N3D4 1523 aa5.43□□□□□ -1.54
ATP2B1-203ENST00000393164 LRRC9Q6ZRR7 1453 aa5.43□□□□□ -1.54
ATP2B1-203ENST00000393164 CDK13Q14004 1512 aaKnown RBP5.43□□□□□ -1.54
ATP2B1-203ENST00000393164 CFAP43Q8NDM7 1665 aa5.43□□□□□ -1.54
ATP2B1-203ENST00000393164 WDR7Q9Y4E6 1490 aa5.42□□□□□ -1.54
ATP2B1-203ENST00000393164 ZCCHC11Q5TAX3 1644 aaKnown RBP5.42□□□□□ -1.54
ATP2B1-203ENST00000393164 ASXL2Q76L83 1435 aa5.42□□□□□ -1.54
ATP2B1-203ENST00000393164 KCNH8Q96L42 1107 aa5.41□□□□□ -1.54
ATP2B1-203ENST00000393164 MAPKBP1O60336 1514 aa5.41□□□□□ -1.54
ATP2B1-203ENST00000393164 KANK4Q5T7N3 995 aaPredicted RBP5.41□□□□□ -1.54
ATP2B1-203ENST00000393164 KIF14Q15058 1648 aa5.41□□□□□ -1.54
ATP2B1-203ENST00000393164 CCNB3Q8WWL7 1395 aa5.41□□□□□ -1.54
ATP2B1-203ENST00000393164 SUPT6HQ7KZ85 1726 aaKnown RBP5.4□□□□□ -1.55
ATP2B1-203ENST00000393164 ILDR1Q86SU0 546 aaPredicted RBP5.4□□□□□ -1.55
ATP2B1-203ENST00000393164 NCOA2Q15596 1464 aa5.39□□□□□ -1.55
ATP2B1-203ENST00000393164 PPARGC1BQ86YN6 1023 aaKnown RBP5.39□□□□□ -1.55
ATP2B1-203ENST00000393164 CFDP1Q9UEE9 299 aaPredicted RBP5.39□□□□□ -1.55
ATP2B1-203ENST00000393164 FAM69CQ0P6D2 419 aa5.38□□□□□ -1.55
ATP2B1-203ENST00000393164 LRRIQ1Q96JM4 1722 aa5.38□□□□□ -1.55
ATP2B1-203ENST00000393164 EFCAB2Q5VUJ9 269 aa5.38□□□□□ -1.55
ATP2B1-203ENST00000393164 MYOM3Q5VTT5 1437 aa5.38□□□□□ -1.55
ATP2B1-203ENST00000393164 MIA2Q96PC5 1412 aa5.38□□□□□ -1.55
ATP2B1-203ENST00000393164 MAGI3Q5TCQ9 1506 aa5.37□□□□□ -1.55
ATP2B1-203ENST00000393164 ABCC10Q5T3U5 1492 aa5.37□□□□□ -1.55
ATP2B1-203ENST00000393164 CD109Q6YHK3 1445 aa5.37□□□□□ -1.55
ATP2B1-203ENST00000393164 TRHP20396 242 aaPredicted RBP5.37□□□□□ -1.55
ATP2B1-203ENST00000393164 PHLDB1Q86UU1 1377 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 GLI2P10070 1586 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 ITSN2Q9NZM3 1697 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 PLCH2O75038 1416 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 ARAP3Q8WWN8 1544 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 PLEKHH2Q8IVE3 1493 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 TEX14Q8IWB6 1497 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 TRIM26Q12899 539 aaPredicted RBP5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 FAM50AQ14320 339 aaKnown RBP5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 RSPH4AQ5TD94 716 aa5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATP2B1-203ENST00000393164 FGD6Q6ZV73 1430 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms