RNA–Protein interactions for RNA: ENST00000393140.5

PRIMA1-202, Transcript of proline rich membrane anchor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIMA1, Length 3,711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-202ENST00000393140 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
PRIMA1-202ENST00000393140 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
PRIMA1-202ENST00000393140 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
PRIMA1-202ENST00000393140 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
PRIMA1-202ENST00000393140 CFTRP13569 1480 aa16.84■□□□□ 0.29
PRIMA1-202ENST00000393140 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
PRIMA1-202ENST00000393140 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.29
PRIMA1-202ENST00000393140 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.29
PRIMA1-202ENST00000393140 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
PRIMA1-202ENST00000393140 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
PRIMA1-202ENST00000393140 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
PRIMA1-202ENST00000393140 CUX1P39880 1505 aa16.81■□□□□ 0.28
PRIMA1-202ENST00000393140 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
PRIMA1-202ENST00000393140 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
PRIMA1-202ENST00000393140 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
PRIMA1-202ENST00000393140 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.27
PRIMA1-202ENST00000393140 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.27
PRIMA1-202ENST00000393140 IGF1RP08069 1367 aa16.76■□□□□ 0.27
PRIMA1-202ENST00000393140 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
PRIMA1-202ENST00000393140 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
PRIMA1-202ENST00000393140 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRIMA1-202ENST00000393140 ANP32CO43423 234 aa16.75■□□□□ 0.27
PRIMA1-202ENST00000393140 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
PRIMA1-202ENST00000393140 MSH5O43196 834 aa16.71■□□□□ 0.27
PRIMA1-202ENST00000393140 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
PRIMA1-202ENST00000393140 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
PRIMA1-202ENST00000393140 KIF21BO75037 1637 aa16.69■□□□□ 0.26
PRIMA1-202ENST00000393140 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
PRIMA1-202ENST00000393140 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
PRIMA1-202ENST00000393140 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
PRIMA1-202ENST00000393140 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
PRIMA1-202ENST00000393140 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
PRIMA1-202ENST00000393140 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
PRIMA1-202ENST00000393140 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
PRIMA1-202ENST00000393140 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
PRIMA1-202ENST00000393140 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
PRIMA1-202ENST00000393140 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
PRIMA1-202ENST00000393140 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.25
PRIMA1-202ENST00000393140 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
PRIMA1-202ENST00000393140 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRIMA1-202ENST00000393140 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
PRIMA1-202ENST00000393140 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-202ENST00000393140 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-202ENST00000393140 ARHGAP35Q9NRY4 1499 aa16.55■□□□□ 0.24
PRIMA1-202ENST00000393140 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
PRIMA1-202ENST00000393140 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
PRIMA1-202ENST00000393140 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
PRIMA1-202ENST00000393140 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
PRIMA1-202ENST00000393140 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
PRIMA1-202ENST00000393140 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
PRIMA1-202ENST00000393140 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
PRIMA1-202ENST00000393140 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
PRIMA1-202ENST00000393140 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
PRIMA1-202ENST00000393140 PHLDB1Q86UU1 1377 aa16.45■□□□□ 0.22
PRIMA1-202ENST00000393140 FOXD1Q16676 465 aa16.45■□□□□ 0.22
PRIMA1-202ENST00000393140 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
PRIMA1-202ENST00000393140 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
PRIMA1-202ENST00000393140 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
PRIMA1-202ENST00000393140 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
PRIMA1-202ENST00000393140 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
PRIMA1-202ENST00000393140 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
PRIMA1-202ENST00000393140 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
PRIMA1-202ENST00000393140 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
PRIMA1-202ENST00000393140 ARXQ96QS3 562 aa16.35■□□□□ 0.21
PRIMA1-202ENST00000393140 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
PRIMA1-202ENST00000393140 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
PRIMA1-202ENST00000393140 MYT1LQ9UL68 1186 aa16.34■□□□□ 0.21
PRIMA1-202ENST00000393140 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.21
PRIMA1-202ENST00000393140 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
PRIMA1-202ENST00000393140 NEFMP07197 916 aa16.31■□□□□ 0.2
PRIMA1-202ENST00000393140 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
PRIMA1-202ENST00000393140 MRS2Q9HD23 443 aa16.3■□□□□ 0.2
PRIMA1-202ENST00000393140 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
PRIMA1-202ENST00000393140 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
PRIMA1-202ENST00000393140 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
PRIMA1-202ENST00000393140 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
PRIMA1-202ENST00000393140 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
PRIMA1-202ENST00000393140 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
PRIMA1-202ENST00000393140 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
PRIMA1-202ENST00000393140 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
PRIMA1-202ENST00000393140 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
PRIMA1-202ENST00000393140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRIMA1-202ENST00000393140 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
PRIMA1-202ENST00000393140 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
PRIMA1-202ENST00000393140 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
PRIMA1-202ENST00000393140 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
PRIMA1-202ENST00000393140 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
PRIMA1-202ENST00000393140 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
PRIMA1-202ENST00000393140 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
PRIMA1-202ENST00000393140 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
PRIMA1-202ENST00000393140 CCER2I3L3R5 266 aa16.15■□□□□ 0.18
PRIMA1-202ENST00000393140 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
PRIMA1-202ENST00000393140 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
PRIMA1-202ENST00000393140 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
PRIMA1-202ENST00000393140 IPO9Q96P70 1041 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms