RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
USP44-202ENST00000393091 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
USP44-202ENST00000393091 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
USP44-202ENST00000393091 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
USP44-202ENST00000393091 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
USP44-202ENST00000393091 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
USP44-202ENST00000393091 DISP1Q96F81 1524 aa21.86■■□□□ 1.09
USP44-202ENST00000393091 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.09
USP44-202ENST00000393091 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.09
USP44-202ENST00000393091 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.09
USP44-202ENST00000393091 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
USP44-202ENST00000393091 FBLN2P98095 1184 aa21.8■■□□□ 1.08
USP44-202ENST00000393091 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
USP44-202ENST00000393091 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
USP44-202ENST00000393091 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
USP44-202ENST00000393091 JPH4Q96JJ6 628 aa21.74■■□□□ 1.07
USP44-202ENST00000393091 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
USP44-202ENST00000393091 DNAJC5Q9H3Z4 198 aa21.71■■□□□ 1.07
USP44-202ENST00000393091 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
USP44-202ENST00000393091 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
USP44-202ENST00000393091 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
USP44-202ENST00000393091 ABCA8O94911 1581 aa21.65■■□□□ 1.06
USP44-202ENST00000393091 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
USP44-202ENST00000393091 CLIP1P30622 1438 aa21.57■■□□□ 1.04
USP44-202ENST00000393091 RAPGEF6Q8TEU7 1601 aa21.56■■□□□ 1.04
USP44-202ENST00000393091 ADCY10Q96PN6 1610 aa21.56■■□□□ 1.04
USP44-202ENST00000393091 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
USP44-202ENST00000393091 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
USP44-202ENST00000393091 FMN1Q68DA7 1419 aa21.53■■□□□ 1.04
USP44-202ENST00000393091 PTPRGP23470 1445 aa21.5■■□□□ 1.03
USP44-202ENST00000393091 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
USP44-202ENST00000393091 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
USP44-202ENST00000393091 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
USP44-202ENST00000393091 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
USP44-202ENST00000393091 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
USP44-202ENST00000393091 FHOD3Q2V2M9 1422 aa21.46■■□□□ 1.03
USP44-202ENST00000393091 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
USP44-202ENST00000393091 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
USP44-202ENST00000393091 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
USP44-202ENST00000393091 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
USP44-202ENST00000393091 MAP3K1Q13233 1512 aa21.43■■□□□ 1.02
USP44-202ENST00000393091 ZCCHC11Q5TAX3 1644 aaKnown RBP21.43■■□□□ 1.02
USP44-202ENST00000393091 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
USP44-202ENST00000393091 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
USP44-202ENST00000393091 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.02
USP44-202ENST00000393091 PLB1Q6P1J6 1458 aa21.39■■□□□ 1.01
USP44-202ENST00000393091 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
USP44-202ENST00000393091 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
USP44-202ENST00000393091 ATP10BO94823 1461 aa21.3■■□□□ 1
USP44-202ENST00000393091 GLI2P10070 1586 aa21.29■■□□□ 1
USP44-202ENST00000393091 TIAM1Q13009 1591 aa21.25■□□□□ 0.99
USP44-202ENST00000393091 KIF13AQ9H1H9 1805 aa21.21■□□□□ 0.99
USP44-202ENST00000393091 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
USP44-202ENST00000393091 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
USP44-202ENST00000393091 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
USP44-202ENST00000393091 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
USP44-202ENST00000393091 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
USP44-202ENST00000393091 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
USP44-202ENST00000393091 MAP3K4Q9Y6R4 1608 aa21.17■□□□□ 0.98
USP44-202ENST00000393091 CDK13Q14004 1512 aaKnown RBP21.17■□□□□ 0.98
USP44-202ENST00000393091 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
USP44-202ENST00000393091 MAGI3Q5TCQ9 1506 aa21.15■□□□□ 0.98
USP44-202ENST00000393091 ASXL2Q76L83 1435 aa21.14■□□□□ 0.97
USP44-202ENST00000393091 ABCC10Q5T3U5 1492 aa21.14■□□□□ 0.97
USP44-202ENST00000393091 ARAP3Q8WWN8 1544 aa21.13■□□□□ 0.97
USP44-202ENST00000393091 TROQ12816 1431 aaPredicted RBP21.11■□□□□ 0.97
USP44-202ENST00000393091 KIF14Q15058 1648 aa21.1■□□□□ 0.97
USP44-202ENST00000393091 SUPT6HQ7KZ85 1726 aaKnown RBP21.08■□□□□ 0.97
USP44-202ENST00000393091 LRRC9Q6ZRR7 1453 aa21.08■□□□□ 0.97
USP44-202ENST00000393091 PPRC1Q5VV67 1664 aaKnown RBP21.07■□□□□ 0.96
USP44-202ENST00000393091 RANGAP1P46060 587 aaPredicted RBP21.07■□□□□ 0.96
USP44-202ENST00000393091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
USP44-202ENST00000393091 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
USP44-202ENST00000393091 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
USP44-202ENST00000393091 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
USP44-202ENST00000393091 ITSN2Q9NZM3 1697 aa21.03■□□□□ 0.96
USP44-202ENST00000393091 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
USP44-202ENST00000393091 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.95
USP44-202ENST00000393091 TTC37Q6PGP7 1564 aa21.01■□□□□ 0.95
USP44-202ENST00000393091 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
USP44-202ENST00000393091 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
USP44-202ENST00000393091 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
USP44-202ENST00000393091 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
USP44-202ENST00000393091 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
USP44-202ENST00000393091 PLCH2O75038 1416 aa20.89■□□□□ 0.94
USP44-202ENST00000393091 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
USP44-202ENST00000393091 NEO1Q92859 1461 aa20.88■□□□□ 0.93
USP44-202ENST00000393091 MTUS2Q5JR59 1369 aa20.88■□□□□ 0.93
USP44-202ENST00000393091 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
USP44-202ENST00000393091 TEX14Q8IWB6 1497 aa20.87■□□□□ 0.93
USP44-202ENST00000393091 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
USP44-202ENST00000393091 TCOF1Q13428 1488 aaKnown RBP20.83■□□□□ 0.93
USP44-202ENST00000393091 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
USP44-202ENST00000393091 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
USP44-202ENST00000393091 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
USP44-202ENST00000393091 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
USP44-202ENST00000393091 ABCC1P33527 1531 aa20.79■□□□□ 0.92
USP44-202ENST00000393091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP44-202ENST00000393091 ARHGEF5Q12774 1597 aa20.79■□□□□ 0.92
USP44-202ENST00000393091 RICTORQ6R327 1708 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms