RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 FHOD3Q2V2M9 1422 aa31.94■■■□□ 2.7
SPTBN4-203ENST00000392023 TARBP1Q13395 1621 aaKnown RBP31.88■■■□□ 2.69
SPTBN4-203ENST00000392023 AQRO60306 1485 aaKnown RBP eCLIP31.88■■■□□ 2.69
SPTBN4-203ENST00000392023 SCAF1Q9H7N4 1312 aaKnown RBP31.87■■■□□ 2.69
SPTBN4-203ENST00000392023 ITGAEP38570 1179 aa31.86■■■□□ 2.69
SPTBN4-203ENST00000392023 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
SPTBN4-203ENST00000392023 CTTNBP2Q8WZ74 1663 aa31.81■■■□□ 2.68
SPTBN4-203ENST00000392023 TIAM1Q13009 1591 aa31.78■■■□□ 2.68
SPTBN4-203ENST00000392023 FHAD1B1AJZ9 1412 aa31.77■■■□□ 2.68
SPTBN4-203ENST00000392023 PCF11O94913 1555 aaKnown RBP31.76■■■□□ 2.68
SPTBN4-203ENST00000392023 RRBP1Q9P2E9 1410 aaKnown RBP31.73■■■□□ 2.67
SPTBN4-203ENST00000392023 CCNB3Q8WWL7 1395 aa31.71■■■□□ 2.67
SPTBN4-203ENST00000392023 LRRC9Q6ZRR7 1453 aa31.7■■■□□ 2.67
SPTBN4-203ENST00000392023 ZNF608Q9ULD9 1512 aaPredicted RBP31.69■■■□□ 2.66
SPTBN4-203ENST00000392023 EFCAB5A4FU69 1503 aa31.67■■■□□ 2.66
SPTBN4-203ENST00000392023 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
SPTBN4-203ENST00000392023 PBRM1Q86U86 1689 aa31.65■■■□□ 2.66
SPTBN4-203ENST00000392023 PHLDB1Q86UU1 1377 aa31.63■■■□□ 2.65
SPTBN4-203ENST00000392023 MAP3K1Q13233 1512 aa31.62■■■□□ 2.65
SPTBN4-203ENST00000392023 CASKIN1Q8WXD9 1431 aa31.59■■■□□ 2.65
SPTBN4-203ENST00000392023 FAM50AQ14320 339 aaKnown RBP31.58■■■□□ 2.65
SPTBN4-203ENST00000392023 WDR62O43379 1518 aa31.57■■■□□ 2.64
SPTBN4-203ENST00000392023 FYCO1Q9BQS8 1478 aa31.56■■■□□ 2.64
SPTBN4-203ENST00000392023 FMN1Q68DA7 1419 aa31.55■■■□□ 2.64
SPTBN4-203ENST00000392023 GRIN2BQ13224 1484 aa31.54■■■□□ 2.64
SPTBN4-203ENST00000392023 IFT140Q96RY7 1462 aa31.54■■■□□ 2.64
SPTBN4-203ENST00000392023 CFAP43Q8NDM7 1665 aa31.53■■■□□ 2.64
SPTBN4-203ENST00000392023 SAMD9Q5K651 1589 aa31.5■■■□□ 2.63
SPTBN4-203ENST00000392023 ADAMTS12P58397 1594 aa31.49■■■□□ 2.63
SPTBN4-203ENST00000392023 SNAPC4Q5SXM2 1469 aa31.49■■■□□ 2.63
SPTBN4-203ENST00000392023 DHX57Q6P158 1386 aaKnown RBP31.49■■■□□ 2.63
SPTBN4-203ENST00000392023 ARID3CA6NKF2 412 aa31.44■■■□□ 2.62
SPTBN4-203ENST00000392023 MTUS2Q5JR59 1369 aa31.4■■■□□ 2.62
SPTBN4-203ENST00000392023 LRRIQ1Q96JM4 1722 aa31.38■■■□□ 2.61
SPTBN4-203ENST00000392023 DIEXFQ68CQ4 756 aaKnown RBP31.38■■■□□ 2.61
SPTBN4-203ENST00000392023 FBLN2P98095 1184 aa31.38■■■□□ 2.61
SPTBN4-203ENST00000392023 IQGAP2Q13576 1575 aa31.38■■■□□ 2.61
SPTBN4-203ENST00000392023 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
SPTBN4-203ENST00000392023 THOC2Q8NI27 1593 aaKnown RBP31.35■■■□□ 2.61
SPTBN4-203ENST00000392023 RAB3GAP2Q9H2M9 1393 aa31.34■■■□□ 2.61
SPTBN4-203ENST00000392023 ZNF316A6NFI3 1004 aaPredicted RBP31.33■■■□□ 2.61
SPTBN4-203ENST00000392023 CHMP7Q8WUX9 453 aaPredicted RBP31.28■■■□□ 2.6
SPTBN4-203ENST00000392023 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
SPTBN4-203ENST00000392023 SETD5Q9C0A6 1442 aa31.22■■■□□ 2.59
SPTBN4-203ENST00000392023 CLSPNQ9HAW4 1339 aa31.21■■■□□ 2.59
SPTBN4-203ENST00000392023 FGD6Q6ZV73 1430 aa31.19■■■□□ 2.58
SPTBN4-203ENST00000392023 NCOA2Q15596 1464 aa31.18■■■□□ 2.58
SPTBN4-203ENST00000392023 MAGI3Q5TCQ9 1506 aa31.18■■■□□ 2.58
SPTBN4-203ENST00000392023 KIAA0586Q9BVV6 1533 aa31.17■■■□□ 2.58
SPTBN4-203ENST00000392023 CDK13Q14004 1512 aaKnown RBP31.14■■■□□ 2.58
SPTBN4-203ENST00000392023 UGGT2Q9NYU1 1516 aa31.14■■■□□ 2.58
SPTBN4-203ENST00000392023 DISP1Q96F81 1524 aa31.11■■■□□ 2.57
SPTBN4-203ENST00000392023 EPRSP07814 1512 aaKnown RBP31.1■■■□□ 2.57
SPTBN4-203ENST00000392023 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
SPTBN4-203ENST00000392023 HECW1Q76N89 1606 aa31.07■■■□□ 2.56
SPTBN4-203ENST00000392023 MYOM3Q5VTT5 1437 aa31.07■■■□□ 2.56
SPTBN4-203ENST00000392023 SYNJ2O15056 1496 aa31.06■■■□□ 2.56
SPTBN4-203ENST00000392023 PTPRKQ15262 1439 aa31.06■■■□□ 2.56
SPTBN4-203ENST00000392023 SUPT6HQ7KZ85 1726 aaKnown RBP31.06■■■□□ 2.56
SPTBN4-203ENST00000392023 EHBP1L1Q8N3D4 1523 aa31.06■■■□□ 2.56
SPTBN4-203ENST00000392023 CCDC18Q5T9S5 1454 aa31.05■■■□□ 2.56
SPTBN4-203ENST00000392023 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
SPTBN4-203ENST00000392023 KIAA0556O60303 1618 aa31.04■■■□□ 2.56
SPTBN4-203ENST00000392023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.03■■■□□ 2.56
SPTBN4-203ENST00000392023 SIN3AQ96ST3 1273 aa31.03■■■□□ 2.56
SPTBN4-203ENST00000392023 MAPKBP1O60336 1514 aa31.03■■■□□ 2.56
SPTBN4-203ENST00000392023 NEUROD1Q13562 356 aa31.02■■■□□ 2.56
SPTBN4-203ENST00000392023 CHIC2Q9UKJ5 165 aa30.99■■■□□ 2.55
SPTBN4-203ENST00000392023 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
SPTBN4-203ENST00000392023 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.55
SPTBN4-203ENST00000392023 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
SPTBN4-203ENST00000392023 PTPN23Q9H3S7 1636 aa30.92■■■□□ 2.54
SPTBN4-203ENST00000392023 RRP7BPQ9NSQ0 103 aa30.91■■■□□ 2.54
SPTBN4-203ENST00000392023 NUP153P49790 1475 aaKnown RBP30.91■■■□□ 2.54
SPTBN4-203ENST00000392023 PLB1Q6P1J6 1458 aa30.88■■■□□ 2.53
SPTBN4-203ENST00000392023 NUP160Q12769 1436 aa30.86■■■□□ 2.53
SPTBN4-203ENST00000392023 MIER1Q8N108 512 aa30.85■■■□□ 2.53
SPTBN4-203ENST00000392023 RAPGEF6Q8TEU7 1601 aa30.85■■■□□ 2.53
SPTBN4-203ENST00000392023 HFM1A2PYH4 1435 aa30.81■■■□□ 2.52
SPTBN4-203ENST00000392023 NAIPQ13075 1403 aa30.8■■■□□ 2.52
SPTBN4-203ENST00000392023 ZNF644Q9H582 1327 aaPredicted RBP30.8■■■□□ 2.52
SPTBN4-203ENST00000392023 CARMIL2Q6F5E8 1435 aa30.78■■■□□ 2.52
SPTBN4-203ENST00000392023 PRG4Q92954 1404 aaPredicted RBP30.78■■■□□ 2.52
SPTBN4-203ENST00000392023 CDK11AQ9UQ88 783 aaPredicted RBP30.77■■■□□ 2.52
SPTBN4-203ENST00000392023 TCOF1Q13428 1488 aaKnown RBP30.72■■■□□ 2.51
SPTBN4-203ENST00000392023 YTHDC1Q96MU7 727 aaKnown RBP30.69■■■□□ 2.5
SPTBN4-203ENST00000392023 MIA2Q96PC5 1412 aa30.69■■■□□ 2.5
SPTBN4-203ENST00000392023 TRIM52Q96A61 297 aa30.67■■■□□ 2.5
SPTBN4-203ENST00000392023 UACAQ9BZF9 1416 aa30.66■■■□□ 2.5
SPTBN4-203ENST00000392023 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
SPTBN4-203ENST00000392023 GTF3C3Q9Y5Q9 886 aa30.64■■■□□ 2.49
SPTBN4-203ENST00000392023 TROQ12816 1431 aaPredicted RBP30.61■■■□□ 2.49
SPTBN4-203ENST00000392023 KDM6BO15054 1643 aa30.61■■■□□ 2.49
SPTBN4-203ENST00000392023 CFDP1Q9UEE9 299 aaPredicted RBP30.6■■■□□ 2.49
SPTBN4-203ENST00000392023 HIRIP3Q9BW71 556 aaPredicted RBP30.57■■■□□ 2.48
SPTBN4-203ENST00000392023 CHD1O14646 1710 aa30.57■■■□□ 2.48
SPTBN4-203ENST00000392023 KIF14Q15058 1648 aa30.57■■■□□ 2.48
SPTBN4-203ENST00000392023 PLEKHD1A6NEE1 506 aa30.55■■■□□ 2.48
SPTBN4-203ENST00000392023 PPP1R15AO75807 674 aaPredicted RBP30.55■■■□□ 2.48
SPTBN4-203ENST00000392023 DAPK1P53355 1430 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms