RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
LRRFIP1-204ENST00000392000 SENP3-EIF4A1A0A087X0R7 540 aa20.56■□□□□ 0.88
LRRFIP1-204ENST00000392000 ANP32CO43423 234 aa20.56■□□□□ 0.88
LRRFIP1-204ENST00000392000 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
LRRFIP1-204ENST00000392000 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
LRRFIP1-204ENST00000392000 IGF1RP08069 1367 aa20.52■□□□□ 0.88
LRRFIP1-204ENST00000392000 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
LRRFIP1-204ENST00000392000 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
LRRFIP1-204ENST00000392000 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
LRRFIP1-204ENST00000392000 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
LRRFIP1-204ENST00000392000 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
LRRFIP1-204ENST00000392000 CHIC2Q9UKJ5 165 aa20.46■□□□□ 0.87
LRRFIP1-204ENST00000392000 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
LRRFIP1-204ENST00000392000 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
LRRFIP1-204ENST00000392000 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
LRRFIP1-204ENST00000392000 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
LRRFIP1-204ENST00000392000 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
LRRFIP1-204ENST00000392000 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
LRRFIP1-204ENST00000392000 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
LRRFIP1-204ENST00000392000 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
LRRFIP1-204ENST00000392000 CFTRP13569 1480 aa20.35■□□□□ 0.85
LRRFIP1-204ENST00000392000 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
LRRFIP1-204ENST00000392000 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.85
LRRFIP1-204ENST00000392000 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.84
LRRFIP1-204ENST00000392000 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
LRRFIP1-204ENST00000392000 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
LRRFIP1-204ENST00000392000 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
LRRFIP1-204ENST00000392000 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
LRRFIP1-204ENST00000392000 FOXD1Q16676 465 aa20.29■□□□□ 0.84
LRRFIP1-204ENST00000392000 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
LRRFIP1-204ENST00000392000 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
LRRFIP1-204ENST00000392000 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
LRRFIP1-204ENST00000392000 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
LRRFIP1-204ENST00000392000 TIAM1Q13009 1591 aa20.23■□□□□ 0.83
LRRFIP1-204ENST00000392000 MSH5O43196 834 aa20.22■□□□□ 0.83
LRRFIP1-204ENST00000392000 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
LRRFIP1-204ENST00000392000 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
LRRFIP1-204ENST00000392000 NBR1Q14596 966 aa20.2■□□□□ 0.82
LRRFIP1-204ENST00000392000 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
LRRFIP1-204ENST00000392000 NESP48681 1621 aa20.17■□□□□ 0.82
LRRFIP1-204ENST00000392000 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
LRRFIP1-204ENST00000392000 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
LRRFIP1-204ENST00000392000 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
LRRFIP1-204ENST00000392000 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
LRRFIP1-204ENST00000392000 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
LRRFIP1-204ENST00000392000 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
LRRFIP1-204ENST00000392000 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
LRRFIP1-204ENST00000392000 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
LRRFIP1-204ENST00000392000 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
LRRFIP1-204ENST00000392000 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
LRRFIP1-204ENST00000392000 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
LRRFIP1-204ENST00000392000 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
LRRFIP1-204ENST00000392000 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.791e-7■■■■■ 27.6
LRRFIP1-204ENST00000392000 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
LRRFIP1-204ENST00000392000 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
LRRFIP1-204ENST00000392000 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
LRRFIP1-204ENST00000392000 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
LRRFIP1-204ENST00000392000 C11orf95C9JLR9 678 aaPredicted RBP19.98■□□□□ 0.79
LRRFIP1-204ENST00000392000 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
LRRFIP1-204ENST00000392000 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
LRRFIP1-204ENST00000392000 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
LRRFIP1-204ENST00000392000 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
LRRFIP1-204ENST00000392000 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
LRRFIP1-204ENST00000392000 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
LRRFIP1-204ENST00000392000 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
LRRFIP1-204ENST00000392000 FMN1Q68DA7 1419 aa19.91■□□□□ 0.78
LRRFIP1-204ENST00000392000 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
LRRFIP1-204ENST00000392000 PPP4R2Q9NY27 417 aa19.91■□□□□ 0.78
LRRFIP1-204ENST00000392000 DEKP35659 375 aaKnown RBP19.9■□□□□ 0.78
LRRFIP1-204ENST00000392000 NAIPQ13075 1403 aa19.9■□□□□ 0.78
LRRFIP1-204ENST00000392000 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
LRRFIP1-204ENST00000392000 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.77
LRRFIP1-204ENST00000392000 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
LRRFIP1-204ENST00000392000 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
LRRFIP1-204ENST00000392000 FBLN2P98095 1184 aa19.88■□□□□ 0.77
LRRFIP1-204ENST00000392000 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
LRRFIP1-204ENST00000392000 NBPF8Q3BBV2 869 aa19.86■□□□□ 0.77
LRRFIP1-204ENST00000392000 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
LRRFIP1-204ENST00000392000 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
LRRFIP1-204ENST00000392000 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
LRRFIP1-204ENST00000392000 HFM1A2PYH4 1435 aa19.84■□□□□ 0.77
LRRFIP1-204ENST00000392000 RTN4Q9NQC3 1192 aaKnown RBP19.83■□□□□ 0.76
LRRFIP1-204ENST00000392000 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
LRRFIP1-204ENST00000392000 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
LRRFIP1-204ENST00000392000 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
LRRFIP1-204ENST00000392000 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
LRRFIP1-204ENST00000392000 RTL5Q5HYW3 569 aaPredicted RBP19.78■□□□□ 0.76
LRRFIP1-204ENST00000392000 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.76
LRRFIP1-204ENST00000392000 FANCIQ9NVI1 1328 aa19.77■□□□□ 0.76
LRRFIP1-204ENST00000392000 NOP58Q9Y2X3 529 aaKnown RBP19.77■□□□□ 0.75
LRRFIP1-204ENST00000392000 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
LRRFIP1-204ENST00000392000 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
LRRFIP1-204ENST00000392000 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
LRRFIP1-204ENST00000392000 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
LRRFIP1-204ENST00000392000 ANP32AP39687 249 aaKnown RBP19.73■□□□□ 0.75
LRRFIP1-204ENST00000392000 CDK13Q14004 1512 aaKnown RBP19.73■□□□□ 0.75
LRRFIP1-204ENST00000392000 LAS1LQ9Y4W2 734 aaKnown RBP19.72■□□□□ 0.75
LRRFIP1-204ENST00000392000 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
LRRFIP1-204ENST00000392000 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
LRRFIP1-204ENST00000392000 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms