RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
NLRP3-205ENST00000391827 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
NLRP3-205ENST00000391827 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
NLRP3-205ENST00000391827 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
NLRP3-205ENST00000391827 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
NLRP3-205ENST00000391827 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
NLRP3-205ENST00000391827 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
NLRP3-205ENST00000391827 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
NLRP3-205ENST00000391827 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
NLRP3-205ENST00000391827 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
NLRP3-205ENST00000391827 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
NLRP3-205ENST00000391827 CASKIN1Q8WXD9 1431 aa15.97■□□□□ 0.15
NLRP3-205ENST00000391827 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
NLRP3-205ENST00000391827 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
NLRP3-205ENST00000391827 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
NLRP3-205ENST00000391827 FHOD3Q2V2M9 1422 aa15.93■□□□□ 0.14
NLRP3-205ENST00000391827 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
NLRP3-205ENST00000391827 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
NLRP3-205ENST00000391827 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
NLRP3-205ENST00000391827 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
NLRP3-205ENST00000391827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.14
NLRP3-205ENST00000391827 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
NLRP3-205ENST00000391827 THOC2Q8NI27 1593 aaKnown RBP15.88■□□□□ 0.13
NLRP3-205ENST00000391827 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
NLRP3-205ENST00000391827 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
NLRP3-205ENST00000391827 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
NLRP3-205ENST00000391827 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
NLRP3-205ENST00000391827 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
NLRP3-205ENST00000391827 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
NLRP3-205ENST00000391827 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
NLRP3-205ENST00000391827 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
NLRP3-205ENST00000391827 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
NLRP3-205ENST00000391827 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
NLRP3-205ENST00000391827 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
NLRP3-205ENST00000391827 LRRIQ1Q96JM4 1722 aa15.78■□□□□ 0.12
NLRP3-205ENST00000391827 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
NLRP3-205ENST00000391827 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
NLRP3-205ENST00000391827 ITGAEP38570 1179 aa15.77■□□□□ 0.11
NLRP3-205ENST00000391827 MIER1Q8N108 512 aa15.75■□□□□ 0.11
NLRP3-205ENST00000391827 EHBP1L1Q8N3D4 1523 aa15.75■□□□□ 0.11
NLRP3-205ENST00000391827 FAM50AQ14320 339 aaKnown RBP15.74■□□□□ 0.11
NLRP3-205ENST00000391827 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
NLRP3-205ENST00000391827 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
NLRP3-205ENST00000391827 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
NLRP3-205ENST00000391827 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
NLRP3-205ENST00000391827 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
NLRP3-205ENST00000391827 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
NLRP3-205ENST00000391827 WDR62O43379 1518 aa15.71■□□□□ 0.11
NLRP3-205ENST00000391827 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
NLRP3-205ENST00000391827 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
NLRP3-205ENST00000391827 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
NLRP3-205ENST00000391827 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
NLRP3-205ENST00000391827 HECW1Q76N89 1606 aa15.69■□□□□ 0.1
NLRP3-205ENST00000391827 UGGT2Q9NYU1 1516 aa15.69■□□□□ 0.1
NLRP3-205ENST00000391827 HFM1A2PYH4 1435 aa15.67■□□□□ 0.1
NLRP3-205ENST00000391827 MAGI3Q5TCQ9 1506 aa15.65■□□□□ 0.1
NLRP3-205ENST00000391827 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
NLRP3-205ENST00000391827 PTPN23Q9H3S7 1636 aa15.64■□□□□ 0.09
NLRP3-205ENST00000391827 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
NLRP3-205ENST00000391827 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
NLRP3-205ENST00000391827 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
NLRP3-205ENST00000391827 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
NLRP3-205ENST00000391827 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
NLRP3-205ENST00000391827 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
NLRP3-205ENST00000391827 NAIPQ13075 1403 aa15.59■□□□□ 0.09
NLRP3-205ENST00000391827 AKNAQ7Z591 1439 aa15.58■□□□□ 0.09
NLRP3-205ENST00000391827 MIA2Q96PC5 1412 aa15.57■□□□□ 0.08
NLRP3-205ENST00000391827 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
NLRP3-205ENST00000391827 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
NLRP3-205ENST00000391827 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
NLRP3-205ENST00000391827 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
NLRP3-205ENST00000391827 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
NLRP3-205ENST00000391827 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
NLRP3-205ENST00000391827 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
NLRP3-205ENST00000391827 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
NLRP3-205ENST00000391827 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
NLRP3-205ENST00000391827 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
NLRP3-205ENST00000391827 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
NLRP3-205ENST00000391827 NUP153P49790 1475 aaKnown RBP15.47■□□□□ 0.07
NLRP3-205ENST00000391827 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
NLRP3-205ENST00000391827 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
NLRP3-205ENST00000391827 TONSLQ96HA7 1378 aa15.45■□□□□ 0.06
NLRP3-205ENST00000391827 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
NLRP3-205ENST00000391827 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
NLRP3-205ENST00000391827 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
NLRP3-205ENST00000391827 DNMT1P26358 1616 aaKnown RBP15.42■□□□□ 0.06
NLRP3-205ENST00000391827 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
NLRP3-205ENST00000391827 NUP160Q12769 1436 aa15.41■□□□□ 0.06
NLRP3-205ENST00000391827 KDM6BO15054 1643 aa15.39■□□□□ 0.05
NLRP3-205ENST00000391827 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
NLRP3-205ENST00000391827 DAPK1P53355 1430 aa15.39■□□□□ 0.05
NLRP3-205ENST00000391827 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
NLRP3-205ENST00000391827 TROQ12816 1431 aaPredicted RBP15.37■□□□□ 0.05
NLRP3-205ENST00000391827 ITSN2Q9NZM3 1697 aa15.36■□□□□ 0.05
NLRP3-205ENST00000391827 RRP7BPQ9NSQ0 103 aa15.36■□□□□ 0.05
NLRP3-205ENST00000391827 ABCC5O15440 1437 aa15.36■□□□□ 0.05
NLRP3-205ENST00000391827 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
NLRP3-205ENST00000391827 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
NLRP3-205ENST00000391827 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.05
NLRP3-205ENST00000391827 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms