RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.61
CCDC57-202ENST00000389641 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
CCDC57-202ENST00000389641 NBR1Q14596 966 aa18.82■□□□□ 0.6
CCDC57-202ENST00000389641 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
CCDC57-202ENST00000389641 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
CCDC57-202ENST00000389641 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
CCDC57-202ENST00000389641 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
CCDC57-202ENST00000389641 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
CCDC57-202ENST00000389641 CUX2O14529 1486 aa18.72■□□□□ 0.59
CCDC57-202ENST00000389641 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
CCDC57-202ENST00000389641 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
CCDC57-202ENST00000389641 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
CCDC57-202ENST00000389641 TOP2BQ02880 1626 aa18.65■□□□□ 0.58
CCDC57-202ENST00000389641 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-202ENST00000389641 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
CCDC57-202ENST00000389641 PPP4R2Q9NY27 417 aa18.62■□□□□ 0.57
CCDC57-202ENST00000389641 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
CCDC57-202ENST00000389641 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
CCDC57-202ENST00000389641 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
CCDC57-202ENST00000389641 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
CCDC57-202ENST00000389641 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
CCDC57-202ENST00000389641 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
CCDC57-202ENST00000389641 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
CCDC57-202ENST00000389641 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
CCDC57-202ENST00000389641 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
CCDC57-202ENST00000389641 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
CCDC57-202ENST00000389641 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
CCDC57-202ENST00000389641 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
CCDC57-202ENST00000389641 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
CCDC57-202ENST00000389641 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
CCDC57-202ENST00000389641 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
CCDC57-202ENST00000389641 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.55
CCDC57-202ENST00000389641 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
CCDC57-202ENST00000389641 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
CCDC57-202ENST00000389641 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
CCDC57-202ENST00000389641 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
CCDC57-202ENST00000389641 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
CCDC57-202ENST00000389641 RTL5Q5HYW3 569 aaPredicted RBP18.46■□□□□ 0.55
CCDC57-202ENST00000389641 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
CCDC57-202ENST00000389641 CUX1P39880 1505 aa18.43■□□□□ 0.54
CCDC57-202ENST00000389641 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
CCDC57-202ENST00000389641 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
CCDC57-202ENST00000389641 CFTRP13569 1480 aa18.4■□□□□ 0.54
CCDC57-202ENST00000389641 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
CCDC57-202ENST00000389641 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
CCDC57-202ENST00000389641 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
CCDC57-202ENST00000389641 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
CCDC57-202ENST00000389641 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
CCDC57-202ENST00000389641 LRRC9Q6ZRR7 1453 aa18.38■□□□□ 0.53
CCDC57-202ENST00000389641 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
CCDC57-202ENST00000389641 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
CCDC57-202ENST00000389641 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
CCDC57-202ENST00000389641 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
CCDC57-202ENST00000389641 NESP48681 1621 aa18.34■□□□□ 0.53
CCDC57-202ENST00000389641 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
CCDC57-202ENST00000389641 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
CCDC57-202ENST00000389641 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
CCDC57-202ENST00000389641 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
CCDC57-202ENST00000389641 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
CCDC57-202ENST00000389641 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.52
CCDC57-202ENST00000389641 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.513e-7■■■□□ 16.9
CCDC57-202ENST00000389641 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CCDC57-202ENST00000389641 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
CCDC57-202ENST00000389641 NEFMP07197 916 aa18.23■□□□□ 0.51
CCDC57-202ENST00000389641 IGF1RP08069 1367 aa18.21■□□□□ 0.51
CCDC57-202ENST00000389641 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
CCDC57-202ENST00000389641 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
CCDC57-202ENST00000389641 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■□□ 18.3
CCDC57-202ENST00000389641 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
CCDC57-202ENST00000389641 PTPRKQ15262 1439 aa18.19■□□□□ 0.5
CCDC57-202ENST00000389641 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
CCDC57-202ENST00000389641 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
CCDC57-202ENST00000389641 FOXD1Q16676 465 aa18.19■□□□□ 0.5
CCDC57-202ENST00000389641 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
CCDC57-202ENST00000389641 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
CCDC57-202ENST00000389641 UACAQ9BZF9 1416 aa18.17■□□□□ 0.5
CCDC57-202ENST00000389641 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
CCDC57-202ENST00000389641 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
CCDC57-202ENST00000389641 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
CCDC57-202ENST00000389641 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
CCDC57-202ENST00000389641 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
CCDC57-202ENST00000389641 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
CCDC57-202ENST00000389641 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
CCDC57-202ENST00000389641 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
CCDC57-202ENST00000389641 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
CCDC57-202ENST00000389641 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
CCDC57-202ENST00000389641 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
CCDC57-202ENST00000389641 HFM1A2PYH4 1435 aa18.08■□□□□ 0.49
CCDC57-202ENST00000389641 NAIPQ13075 1403 aa18.08■□□□□ 0.48
CCDC57-202ENST00000389641 KIF7Q2M1P5 1343 aa18.07■□□□□ 0.48
CCDC57-202ENST00000389641 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
CCDC57-202ENST00000389641 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
CCDC57-202ENST00000389641 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
CCDC57-202ENST00000389641 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
CCDC57-202ENST00000389641 NBPF8Q3BBV2 869 aa18.06■□□□□ 0.48
CCDC57-202ENST00000389641 PDE4AP27815 886 aa18.05■□□□□ 0.48
CCDC57-202ENST00000389641 SKAP1Q86WV1 359 aa18.05■□□□□ 0.48
CCDC57-202ENST00000389641 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
CCDC57-202ENST00000389641 PTPN23Q9H3S7 1636 aa18.04■□□□□ 0.48
CCDC57-202ENST00000389641 NCOA1Q15788 1441 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms