RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
CD9-202ENST00000382515 KIF21BO75037 1637 aa28.88■■■□□ 2.21
CD9-202ENST00000382515 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
CD9-202ENST00000382515 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
CD9-202ENST00000382515 SHROOM2Q13796 1616 aa28.84■■■□□ 2.21
CD9-202ENST00000382515 GOLGA3Q08378 1498 aa28.84■■■□□ 2.21
CD9-202ENST00000382515 CARMIL2Q6F5E8 1435 aa28.83■■■□□ 2.21
CD9-202ENST00000382515 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
CD9-202ENST00000382515 CYB5RLQ6IPT4 315 aa28.79■■■□□ 2.2
CD9-202ENST00000382515 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
CD9-202ENST00000382515 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
CD9-202ENST00000382515 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
CD9-202ENST00000382515 UGGT2Q9NYU1 1516 aa28.75■■■□□ 2.19
CD9-202ENST00000382515 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
CD9-202ENST00000382515 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CD9-202ENST00000382515 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
CD9-202ENST00000382515 CTTNBP2Q8WZ74 1663 aa28.65■■■□□ 2.18
CD9-202ENST00000382515 PTPRGP23470 1445 aa28.65■■■□□ 2.18
CD9-202ENST00000382515 DISP1Q96F81 1524 aa28.64■■■□□ 2.18
CD9-202ENST00000382515 ERCC6L2Q5T890 1561 aa28.63■■■□□ 2.17
CD9-202ENST00000382515 RANGAP1P46060 587 aaPredicted RBP28.52■■■□□ 2.16
CD9-202ENST00000382515 KIAA0556O60303 1618 aa28.51■■■□□ 2.15
CD9-202ENST00000382515 P3H3Q8IVL6 736 aa28.49■■■□□ 2.15
CD9-202ENST00000382515 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
CD9-202ENST00000382515 NPM1P06748 294 aaKnown RBP eCLIP28.47■■■□□ 2.15
CD9-202ENST00000382515 EFCAB5A4FU69 1503 aa28.47■■■□□ 2.15
CD9-202ENST00000382515 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
CD9-202ENST00000382515 SAMD9Q5K651 1589 aa28.43■■■□□ 2.14
CD9-202ENST00000382515 UACAQ9BZF9 1416 aa28.43■■■□□ 2.14
CD9-202ENST00000382515 UHRF1BP1LA0JNW5 1464 aa28.39■■■□□ 2.13
CD9-202ENST00000382515 ARHGAP35Q9NRY4 1499 aa28.35■■■□□ 2.13
CD9-202ENST00000382515 CLIP1P30622 1438 aa28.35■■■□□ 2.13
CD9-202ENST00000382515 FHOD3Q2V2M9 1422 aa28.33■■■□□ 2.13
CD9-202ENST00000382515 FMN1Q68DA7 1419 aa28.31■■■□□ 2.12
CD9-202ENST00000382515 ABCC2Q92887 1545 aa28.28■■■□□ 2.12
CD9-202ENST00000382515 PLB1Q6P1J6 1458 aa28.27■■■□□ 2.12
CD9-202ENST00000382515 CEP162Q5TB80 1403 aa28.26■■■□□ 2.11
CD9-202ENST00000382515 ABCA8O94911 1581 aa28.22■■■□□ 2.11
CD9-202ENST00000382515 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
CD9-202ENST00000382515 KDM5BQ9UGL1 1544 aa28.21■■■□□ 2.11
CD9-202ENST00000382515 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
CD9-202ENST00000382515 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
CD9-202ENST00000382515 RAPGEF6Q8TEU7 1601 aa28.1■■■□□ 2.09
CD9-202ENST00000382515 ATP10BO94823 1461 aa28.09■■■□□ 2.09
CD9-202ENST00000382515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.09■■■□□ 2.09
CD9-202ENST00000382515 HNRNPUL2Q1KMD3 747 aaKnown RBP28.09■■■□□ 2.09
CD9-202ENST00000382515 ATP1B4Q9UN42 357 aaPredicted RBP28.09■■■□□ 2.09
CD9-202ENST00000382515 CASKIN1Q8WXD9 1431 aa28.08■■■□□ 2.09
CD9-202ENST00000382515 CDK11AQ9UQ88 783 aaPredicted RBP28.07■■■□□ 2.08
CD9-202ENST00000382515 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
CD9-202ENST00000382515 PLEKHD1A6NEE1 506 aa28.05■■■□□ 2.08
CD9-202ENST00000382515 ASXL2Q76L83 1435 aa28.05■■■□□ 2.08
CD9-202ENST00000382515 ARID3CA6NKF2 412 aa28■■■□□ 2.07
CD9-202ENST00000382515 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
CD9-202ENST00000382515 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
CD9-202ENST00000382515 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
CD9-202ENST00000382515 FYCO1Q9BQS8 1478 aa27.96■■■□□ 2.07
CD9-202ENST00000382515 WDR7Q9Y4E6 1490 aa27.95■■■□□ 2.07
CD9-202ENST00000382515 EPRSP07814 1512 aaKnown RBP27.95■■■□□ 2.06
CD9-202ENST00000382515 HECW1Q76N89 1606 aa27.95■■■□□ 2.06
CD9-202ENST00000382515 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
CD9-202ENST00000382515 CCDC18Q5T9S5 1454 aa27.92■■■□□ 2.06
CD9-202ENST00000382515 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
CD9-202ENST00000382515 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.05
CD9-202ENST00000382515 GLI2P10070 1586 aa27.83■■■□□ 2.05
CD9-202ENST00000382515 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
CD9-202ENST00000382515 APLP2Q06481 763 aa27.8■■■□□ 2.04
CD9-202ENST00000382515 DIP2BQ9P265 1576 aa27.79■■■□□ 2.04
CD9-202ENST00000382515 TROQ12816 1431 aaPredicted RBP27.77■■■□□ 2.04
CD9-202ENST00000382515 CD109Q6YHK3 1445 aa27.73■■■□□ 2.03
CD9-202ENST00000382515 MAP3K1Q13233 1512 aa27.72■■■□□ 2.03
CD9-202ENST00000382515 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
CD9-202ENST00000382515 KIF13AQ9H1H9 1805 aa27.65■■■□□ 2.02
CD9-202ENST00000382515 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.02
CD9-202ENST00000382515 MAGI3Q5TCQ9 1506 aa27.64■■■□□ 2.02
CD9-202ENST00000382515 TEX14Q8IWB6 1497 aa27.64■■■□□ 2.01
CD9-202ENST00000382515 ABCA9Q8IUA7 1624 aa27.61■■■□□ 2.01
CD9-202ENST00000382515 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
CD9-202ENST00000382515 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
CD9-202ENST00000382515 LRRIQ1Q96JM4 1722 aa27.58■■■□□ 2.01
CD9-202ENST00000382515 PLCH2O75038 1416 aa27.58■■■□□ 2
CD9-202ENST00000382515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
CD9-202ENST00000382515 TIAM1Q13009 1591 aa27.56■■■□□ 2
CD9-202ENST00000382515 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
CD9-202ENST00000382515 LRRC9Q6ZRR7 1453 aa27.55■■■□□ 2
CD9-202ENST00000382515 KIF14Q15058 1648 aa27.55■■■□□ 2
CD9-202ENST00000382515 KANK4Q5T7N3 995 aaPredicted RBP27.54■■■□□ 2
CD9-202ENST00000382515 EHBP1L1Q8N3D4 1523 aa27.53■■■□□ 2
CD9-202ENST00000382515 NEO1Q92859 1461 aa27.5■■□□□ 1.99
CD9-202ENST00000382515 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
CD9-202ENST00000382515 ARAP3Q8WWN8 1544 aa27.49■■□□□ 1.99
CD9-202ENST00000382515 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
CD9-202ENST00000382515 FANCAO15360 1455 aa27.44■■□□□ 1.98
CD9-202ENST00000382515 TTC37Q6PGP7 1564 aa27.43■■□□□ 1.98
CD9-202ENST00000382515 GPATCH8Q9UKJ3 1502 aaKnown RBP27.42■■□□□ 1.98
CD9-202ENST00000382515 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
CD9-202ENST00000382515 TSPOAP1O95153 1857 aa27.4■■□□□ 1.98
CD9-202ENST00000382515 NCOA2Q15596 1464 aa27.4■■□□□ 1.98
CD9-202ENST00000382515 PPRC1Q5VV67 1664 aaKnown RBP27.4■■□□□ 1.98
CD9-202ENST00000382515 SUPT6HQ7KZ85 1726 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms