RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
FAM49A-201ENST00000381323 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
FAM49A-201ENST00000381323 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
FAM49A-201ENST00000381323 PTPRGP23470 1445 aa12.87□□□□□ -0.35
FAM49A-201ENST00000381323 IGF1RP08069 1367 aa12.87□□□□□ -0.35
FAM49A-201ENST00000381323 UBTFP17480 764 aaKnown RBP12.86□□□□□ -0.35
FAM49A-201ENST00000381323 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
FAM49A-201ENST00000381323 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
FAM49A-201ENST00000381323 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
FAM49A-201ENST00000381323 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
FAM49A-201ENST00000381323 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
FAM49A-201ENST00000381323 NUP160Q12769 1436 aa12.84□□□□□ -0.35
FAM49A-201ENST00000381323 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
FAM49A-201ENST00000381323 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
FAM49A-201ENST00000381323 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
FAM49A-201ENST00000381323 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
FAM49A-201ENST00000381323 CEP170Q5SW79 1584 aa12.79□□□□□ -0.36
FAM49A-201ENST00000381323 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
FAM49A-201ENST00000381323 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
FAM49A-201ENST00000381323 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
FAM49A-201ENST00000381323 CUL7Q14999 1698 aa12.71□□□□□ -0.37
FAM49A-201ENST00000381323 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
FAM49A-201ENST00000381323 GOLGA3Q08378 1498 aa12.67□□□□□ -0.38
FAM49A-201ENST00000381323 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
FAM49A-201ENST00000381323 IQGAP2Q13576 1575 aa12.64□□□□□ -0.39
FAM49A-201ENST00000381323 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
FAM49A-201ENST00000381323 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
FAM49A-201ENST00000381323 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
FAM49A-201ENST00000381323 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
FAM49A-201ENST00000381323 PLB1Q6P1J6 1458 aa12.61□□□□□ -0.39
FAM49A-201ENST00000381323 EEA1Q15075 1411 aa12.61□□□□□ -0.39
FAM49A-201ENST00000381323 CHIC1Q5VXU3 224 aa12.59□□□□□ -0.39
FAM49A-201ENST00000381323 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
FAM49A-201ENST00000381323 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
FAM49A-201ENST00000381323 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
FAM49A-201ENST00000381323 ABCC2Q92887 1545 aa12.55□□□□□ -0.4
FAM49A-201ENST00000381323 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
FAM49A-201ENST00000381323 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
FAM49A-201ENST00000381323 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
FAM49A-201ENST00000381323 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
FAM49A-201ENST00000381323 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
FAM49A-201ENST00000381323 KDM6BO15054 1643 aa12.47□□□□□ -0.41
FAM49A-201ENST00000381323 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
FAM49A-201ENST00000381323 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
FAM49A-201ENST00000381323 TSPOAP1O95153 1857 aa12.47□□□□□ -0.41
FAM49A-201ENST00000381323 APLP2Q06481 763 aa12.46□□□□□ -0.41
FAM49A-201ENST00000381323 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
FAM49A-201ENST00000381323 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
FAM49A-201ENST00000381323 FHOD3Q2V2M9 1422 aa12.45□□□□□ -0.42
FAM49A-201ENST00000381323 WDR7Q9Y4E6 1490 aa12.45□□□□□ -0.42
FAM49A-201ENST00000381323 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
FAM49A-201ENST00000381323 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
FAM49A-201ENST00000381323 MLECQ14165 292 aa12.43□□□□□ -0.42
FAM49A-201ENST00000381323 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
FAM49A-201ENST00000381323 DIP2BQ9P265 1576 aa12.4□□□□□ -0.42
FAM49A-201ENST00000381323 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.43
FAM49A-201ENST00000381323 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.43
FAM49A-201ENST00000381323 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
FAM49A-201ENST00000381323 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
FAM49A-201ENST00000381323 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
FAM49A-201ENST00000381323 CLIP1P30622 1438 aa12.36□□□□□ -0.43
FAM49A-201ENST00000381323 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
FAM49A-201ENST00000381323 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
FAM49A-201ENST00000381323 ATP10BO94823 1461 aa12.32□□□□□ -0.44
FAM49A-201ENST00000381323 ZCCHC11Q5TAX3 1644 aaKnown RBP12.31□□□□□ -0.44
FAM49A-201ENST00000381323 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
FAM49A-201ENST00000381323 POGZQ7Z3K3 1410 aa12.29□□□□□ -0.44
FAM49A-201ENST00000381323 KIF13AQ9H1H9 1805 aa12.29□□□□□ -0.44
FAM49A-201ENST00000381323 MTUS2Q5JR59 1369 aa12.28□□□□□ -0.44
FAM49A-201ENST00000381323 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
FAM49A-201ENST00000381323 GLI2P10070 1586 aa12.27□□□□□ -0.44
FAM49A-201ENST00000381323 ABCA8O94911 1581 aa12.26□□□□□ -0.45
FAM49A-201ENST00000381323 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
FAM49A-201ENST00000381323 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
FAM49A-201ENST00000381323 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
FAM49A-201ENST00000381323 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
FAM49A-201ENST00000381323 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
FAM49A-201ENST00000381323 KIF21BO75037 1637 aa12.23□□□□□ -0.45
FAM49A-201ENST00000381323 FANCAO15360 1455 aa12.23□□□□□ -0.45
FAM49A-201ENST00000381323 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
FAM49A-201ENST00000381323 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
FAM49A-201ENST00000381323 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.45
FAM49A-201ENST00000381323 NEO1Q92859 1461 aa12.2□□□□□ -0.46
FAM49A-201ENST00000381323 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
FAM49A-201ENST00000381323 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
FAM49A-201ENST00000381323 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
FAM49A-201ENST00000381323 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
FAM49A-201ENST00000381323 COL17A1Q9UMD9 1497 aaPredicted RBP12.19□□□□□ -0.46
FAM49A-201ENST00000381323 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
FAM49A-201ENST00000381323 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
FAM49A-201ENST00000381323 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
FAM49A-201ENST00000381323 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
FAM49A-201ENST00000381323 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
FAM49A-201ENST00000381323 HECW1Q76N89 1606 aa12.17□□□□□ -0.46
FAM49A-201ENST00000381323 TROQ12816 1431 aaPredicted RBP12.17□□□□□ -0.46
FAM49A-201ENST00000381323 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
FAM49A-201ENST00000381323 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
FAM49A-201ENST00000381323 GGT6Q6P531 493 aa12.16□□□□□ -0.46
FAM49A-201ENST00000381323 SAMD9Q5K651 1589 aa12.15□□□□□ -0.46
FAM49A-201ENST00000381323 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms