RNA–Protein interactions for RNA: ENST00000380990.5

LINC00898-201, long intergenic non-protein coding RNA 898, humanhuman

TSL 2 BASIC

Gene LINC00898, Length 4,185 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00898-201ENST00000380990 CUX2O14529 1486 aa13.58□□□□□ -0.24
LINC00898-201ENST00000380990 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00898-201ENST00000380990 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
LINC00898-201ENST00000380990 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
LINC00898-201ENST00000380990 FOXD1Q16676 465 aa13.54□□□□□ -0.24
LINC00898-201ENST00000380990 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
LINC00898-201ENST00000380990 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
LINC00898-201ENST00000380990 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
LINC00898-201ENST00000380990 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
LINC00898-201ENST00000380990 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
LINC00898-201ENST00000380990 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
LINC00898-201ENST00000380990 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
LINC00898-201ENST00000380990 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
LINC00898-201ENST00000380990 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
LINC00898-201ENST00000380990 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
LINC00898-201ENST00000380990 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
LINC00898-201ENST00000380990 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
LINC00898-201ENST00000380990 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
LINC00898-201ENST00000380990 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
LINC00898-201ENST00000380990 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
LINC00898-201ENST00000380990 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
LINC00898-201ENST00000380990 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00898-201ENST00000380990 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
LINC00898-201ENST00000380990 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
LINC00898-201ENST00000380990 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
LINC00898-201ENST00000380990 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
LINC00898-201ENST00000380990 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
LINC00898-201ENST00000380990 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00898-201ENST00000380990 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
LINC00898-201ENST00000380990 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
LINC00898-201ENST00000380990 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
LINC00898-201ENST00000380990 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
LINC00898-201ENST00000380990 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.28
LINC00898-201ENST00000380990 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
LINC00898-201ENST00000380990 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
LINC00898-201ENST00000380990 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
LINC00898-201ENST00000380990 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
LINC00898-201ENST00000380990 DHX57Q6P158 1386 aaKnown RBP13.27□□□□□ -0.29
LINC00898-201ENST00000380990 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
LINC00898-201ENST00000380990 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
LINC00898-201ENST00000380990 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
LINC00898-201ENST00000380990 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
LINC00898-201ENST00000380990 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
LINC00898-201ENST00000380990 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
LINC00898-201ENST00000380990 CCDC136Q96JN2 1154 aa13.23□□□□□ -0.29
LINC00898-201ENST00000380990 NBR1Q14596 966 aa13.22□□□□□ -0.29
LINC00898-201ENST00000380990 RBM19Q9Y4C8 960 aaKnown RBP13.21□□□□□ -0.29
LINC00898-201ENST00000380990 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.29
LINC00898-201ENST00000380990 PKD2Q13563 968 aa13.21□□□□□ -0.3
LINC00898-201ENST00000380990 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
LINC00898-201ENST00000380990 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00898-201ENST00000380990 MLECQ14165 292 aa13.19□□□□□ -0.3
LINC00898-201ENST00000380990 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00898-201ENST00000380990 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
LINC00898-201ENST00000380990 CC2D1BQ5T0F9 858 aaKnown RBP13.19□□□□□ -0.3
LINC00898-201ENST00000380990 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
LINC00898-201ENST00000380990 IGF1RP08069 1367 aa13.18□□□□□ -0.3
LINC00898-201ENST00000380990 TIMELESSQ9UNS1 1208 aa13.18□□□□□ -0.3
LINC00898-201ENST00000380990 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
LINC00898-201ENST00000380990 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
LINC00898-201ENST00000380990 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
LINC00898-201ENST00000380990 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
LINC00898-201ENST00000380990 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
LINC00898-201ENST00000380990 NESP48681 1621 aa13.16□□□□□ -0.3
LINC00898-201ENST00000380990 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
LINC00898-201ENST00000380990 GGT6Q6P531 493 aa13.15□□□□□ -0.3
LINC00898-201ENST00000380990 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
LINC00898-201ENST00000380990 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
LINC00898-201ENST00000380990 PPM1GO15355 546 aaPredicted RBP13.14□□□□□ -0.31
LINC00898-201ENST00000380990 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
LINC00898-201ENST00000380990 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
LINC00898-201ENST00000380990 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
LINC00898-201ENST00000380990 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00898-201ENST00000380990 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
LINC00898-201ENST00000380990 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
LINC00898-201ENST00000380990 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
LINC00898-201ENST00000380990 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
LINC00898-201ENST00000380990 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
LINC00898-201ENST00000380990 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00898-201ENST00000380990 NEFMP07197 916 aa13.08□□□□□ -0.32
LINC00898-201ENST00000380990 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
LINC00898-201ENST00000380990 NUP155O75694 1391 aa13.07□□□□□ -0.32
LINC00898-201ENST00000380990 SOX12O15370 315 aa13.06□□□□□ -0.32
LINC00898-201ENST00000380990 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
LINC00898-201ENST00000380990 KIF21BO75037 1637 aa13.05□□□□□ -0.32
LINC00898-201ENST00000380990 STK26Q9P289 416 aa13.05□□□□□ -0.32
LINC00898-201ENST00000380990 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
LINC00898-201ENST00000380990 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
LINC00898-201ENST00000380990 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
LINC00898-201ENST00000380990 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
LINC00898-201ENST00000380990 KIF3BO15066 747 aa13□□□□□ -0.33
LINC00898-201ENST00000380990 ARXQ96QS3 562 aa13□□□□□ -0.33
LINC00898-201ENST00000380990 NCAPD3P42695 1498 aa13□□□□□ -0.33
LINC00898-201ENST00000380990 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
LINC00898-201ENST00000380990 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
LINC00898-201ENST00000380990 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.33
LINC00898-201ENST00000380990 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
LINC00898-201ENST00000380990 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
LINC00898-201ENST00000380990 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
LINC00898-201ENST00000380990 POGKQ9P215 609 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms