RNA–Protein interactions for RNA: ENST00000380578.1

TRAPPC2-202, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5

Gene TRAPPC2, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-202ENST00000380578 CUL7Q14999 1698 aa9.67□□□□□ -0.86
TRAPPC2-202ENST00000380578 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
TRAPPC2-202ENST00000380578 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
TRAPPC2-202ENST00000380578 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
TRAPPC2-202ENST00000380578 FHAD1B1AJZ9 1412 aa9.64□□□□□ -0.87
TRAPPC2-202ENST00000380578 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
TRAPPC2-202ENST00000380578 FBLN2P98095 1184 aa9.61□□□□□ -0.87
TRAPPC2-202ENST00000380578 CLIP1P30622 1438 aa9.61□□□□□ -0.87
TRAPPC2-202ENST00000380578 MAGI1Q96QZ7 1491 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC2-202ENST00000380578 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC2-202ENST00000380578 CENPBP07199 599 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC2-202ENST00000380578 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
TRAPPC2-202ENST00000380578 SYNJ2O15056 1496 aa9.58□□□□□ -0.88
TRAPPC2-202ENST00000380578 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
TRAPPC2-202ENST00000380578 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
TRAPPC2-202ENST00000380578 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
TRAPPC2-202ENST00000380578 CTTNBP2Q8WZ74 1663 aa9.56□□□□□ -0.88
TRAPPC2-202ENST00000380578 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
TRAPPC2-202ENST00000380578 CEP170Q5SW79 1584 aa9.55□□□□□ -0.88
TRAPPC2-202ENST00000380578 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
TRAPPC2-202ENST00000380578 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
TRAPPC2-202ENST00000380578 NUP160Q12769 1436 aa9.52□□□□□ -0.89
TRAPPC2-202ENST00000380578 CHD1O14646 1710 aa9.51□□□□□ -0.89
TRAPPC2-202ENST00000380578 KIAA0586Q9BVV6 1533 aa9.51□□□□□ -0.89
TRAPPC2-202ENST00000380578 IQGAP2Q13576 1575 aa9.5□□□□□ -0.89
TRAPPC2-202ENST00000380578 FHOD3Q2V2M9 1422 aa9.5□□□□□ -0.89
TRAPPC2-202ENST00000380578 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
TRAPPC2-202ENST00000380578 SAMD9Q5K651 1589 aa9.48□□□□□ -0.89
TRAPPC2-202ENST00000380578 JPH4Q96JJ6 628 aa9.48□□□□□ -0.89
TRAPPC2-202ENST00000380578 UGGT2Q9NYU1 1516 aa9.47□□□□□ -0.89
TRAPPC2-202ENST00000380578 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.89
TRAPPC2-202ENST00000380578 DISP1Q96F81 1524 aa9.46□□□□□ -0.89
TRAPPC2-202ENST00000380578 TTBK1Q5TCY1 1321 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC2-202ENST00000380578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC2-202ENST00000380578 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC2-202ENST00000380578 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
TRAPPC2-202ENST00000380578 ATP1B4Q9UN42 357 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC2-202ENST00000380578 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC2-202ENST00000380578 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
TRAPPC2-202ENST00000380578 PRG4Q92954 1404 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC2-202ENST00000380578 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
TRAPPC2-202ENST00000380578 ERCC6L2Q5T890 1561 aa9.4□□□□□ -0.9
TRAPPC2-202ENST00000380578 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
TRAPPC2-202ENST00000380578 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
TRAPPC2-202ENST00000380578 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC2-202ENST00000380578 SHROOM2Q13796 1616 aa9.39□□□□□ -0.91
TRAPPC2-202ENST00000380578 APLP2Q06481 763 aa9.38□□□□□ -0.91
TRAPPC2-202ENST00000380578 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
TRAPPC2-202ENST00000380578 CARMIL2Q6F5E8 1435 aa9.37□□□□□ -0.91
TRAPPC2-202ENST00000380578 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
TRAPPC2-202ENST00000380578 LRRIQ1Q96JM4 1722 aa9.36□□□□□ -0.91
TRAPPC2-202ENST00000380578 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
TRAPPC2-202ENST00000380578 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
TRAPPC2-202ENST00000380578 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
TRAPPC2-202ENST00000380578 CLSPNQ9HAW4 1339 aa9.34□□□□□ -0.91
TRAPPC2-202ENST00000380578 PTPRGP23470 1445 aa9.33□□□□□ -0.92
TRAPPC2-202ENST00000380578 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
TRAPPC2-202ENST00000380578 NUP153P49790 1475 aaKnown RBP9.32□□□□□ -0.92
TRAPPC2-202ENST00000380578 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
TRAPPC2-202ENST00000380578 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
TRAPPC2-202ENST00000380578 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
TRAPPC2-202ENST00000380578 EPRSP07814 1512 aaKnown RBP9.31□□□□□ -0.92
TRAPPC2-202ENST00000380578 CFAP43Q8NDM7 1665 aa9.3□□□□□ -0.92
TRAPPC2-202ENST00000380578 ABCA8O94911 1581 aa9.3□□□□□ -0.92
TRAPPC2-202ENST00000380578 MAGI3Q5TCQ9 1506 aa9.3□□□□□ -0.92
TRAPPC2-202ENST00000380578 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
TRAPPC2-202ENST00000380578 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
TRAPPC2-202ENST00000380578 HNRNPUL2Q1KMD3 747 aaKnown RBP9.27□□□□□ -0.92
TRAPPC2-202ENST00000380578 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.92
TRAPPC2-202ENST00000380578 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
TRAPPC2-202ENST00000380578 MIER1Q8N108 512 aa9.27□□□□□ -0.93
TRAPPC2-202ENST00000380578 ATP10BO94823 1461 aa9.27□□□□□ -0.93
TRAPPC2-202ENST00000380578 CCDC18Q5T9S5 1454 aa9.26□□□□□ -0.93
TRAPPC2-202ENST00000380578 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
TRAPPC2-202ENST00000380578 MTUS2Q5JR59 1369 aa9.26□□□□□ -0.93
TRAPPC2-202ENST00000380578 ABCC2Q92887 1545 aa9.23□□□□□ -0.93
TRAPPC2-202ENST00000380578 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
TRAPPC2-202ENST00000380578 ARHGEF11O15085 1522 aa9.22□□□□□ -0.93
TRAPPC2-202ENST00000380578 EHBP1L1Q8N3D4 1523 aa9.22□□□□□ -0.93
TRAPPC2-202ENST00000380578 YTHDC1Q96MU7 727 aaKnown RBP9.22□□□□□ -0.93
TRAPPC2-202ENST00000380578 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
TRAPPC2-202ENST00000380578 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
TRAPPC2-202ENST00000380578 ADCY10Q96PN6 1610 aa9.2□□□□□ -0.94
TRAPPC2-202ENST00000380578 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
TRAPPC2-202ENST00000380578 CDK11AQ9UQ88 783 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC2-202ENST00000380578 TROQ12816 1431 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC2-202ENST00000380578 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
TRAPPC2-202ENST00000380578 SUPT16HQ9Y5B9 1047 aaKnown RBP9.19□□□□□ -0.94
TRAPPC2-202ENST00000380578 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
TRAPPC2-202ENST00000380578 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
TRAPPC2-202ENST00000380578 RIMBP3CA6NJZ7 1639 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 RIMBP3BA6NNM3 1639 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 KIF14Q15058 1648 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 RIMBP3Q9UFD9 1639 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 KDM5BQ9UGL1 1544 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 CYB5RLQ6IPT4 315 aa9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 ZCCHC11Q5TAX3 1644 aaKnown RBP9.18□□□□□ -0.94
TRAPPC2-202ENST00000380578 ITGAEP38570 1179 aa9.17□□□□□ -0.94
TRAPPC2-202ENST00000380578 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
TRAPPC2-202ENST00000380578 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms