RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
PRPF40B-202ENST00000380281 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
PRPF40B-202ENST00000380281 MSH5O43196 834 aa17.61■□□□□ 0.41
PRPF40B-202ENST00000380281 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
PRPF40B-202ENST00000380281 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PRPF40B-202ENST00000380281 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-202ENST00000380281 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
PRPF40B-202ENST00000380281 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.4
PRPF40B-202ENST00000380281 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-202ENST00000380281 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
PRPF40B-202ENST00000380281 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
PRPF40B-202ENST00000380281 NEFLP07196 543 aa17.53■□□□□ 0.4
PRPF40B-202ENST00000380281 ANP32CO43423 234 aa17.52■□□□□ 0.4
PRPF40B-202ENST00000380281 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.39
PRPF40B-202ENST00000380281 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
PRPF40B-202ENST00000380281 ANO8Q9HCE9 1232 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-202ENST00000380281 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
PRPF40B-202ENST00000380281 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
PRPF40B-202ENST00000380281 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
PRPF40B-202ENST00000380281 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
PRPF40B-202ENST00000380281 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
PRPF40B-202ENST00000380281 PPP1R15AO75807 674 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-202ENST00000380281 CFTRP13569 1480 aa17.44■□□□□ 0.38
PRPF40B-202ENST00000380281 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
PRPF40B-202ENST00000380281 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
PRPF40B-202ENST00000380281 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
PRPF40B-202ENST00000380281 FOXD1Q16676 465 aa17.43■□□□□ 0.38
PRPF40B-202ENST00000380281 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
PRPF40B-202ENST00000380281 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
PRPF40B-202ENST00000380281 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRPF40B-202ENST00000380281 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
PRPF40B-202ENST00000380281 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
PRPF40B-202ENST00000380281 MTUS2Q5JR59 1369 aa17.39■□□□□ 0.37
PRPF40B-202ENST00000380281 DEKP35659 375 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-202ENST00000380281 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
PRPF40B-202ENST00000380281 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
PRPF40B-202ENST00000380281 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
PRPF40B-202ENST00000380281 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
PRPF40B-202ENST00000380281 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-202ENST00000380281 NESP48681 1621 aa17.3■□□□□ 0.36
PRPF40B-202ENST00000380281 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
PRPF40B-202ENST00000380281 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-202ENST00000380281 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
PRPF40B-202ENST00000380281 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
PRPF40B-202ENST00000380281 CCDC184Q52MB2 194 aa17.27■□□□□ 0.35
PRPF40B-202ENST00000380281 PCF11O94913 1555 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-202ENST00000380281 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
PRPF40B-202ENST00000380281 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-202ENST00000380281 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
PRPF40B-202ENST00000380281 NBR1Q14596 966 aa17.23■□□□□ 0.35
PRPF40B-202ENST00000380281 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
PRPF40B-202ENST00000380281 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-202ENST00000380281 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
PRPF40B-202ENST00000380281 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
PRPF40B-202ENST00000380281 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
PRPF40B-202ENST00000380281 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-202ENST00000380281 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRPF40B-202ENST00000380281 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
PRPF40B-202ENST00000380281 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
PRPF40B-202ENST00000380281 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
PRPF40B-202ENST00000380281 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-202ENST00000380281 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.34
PRPF40B-202ENST00000380281 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-202ENST00000380281 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRPF40B-202ENST00000380281 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
PRPF40B-202ENST00000380281 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
PRPF40B-202ENST00000380281 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
PRPF40B-202ENST00000380281 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
PRPF40B-202ENST00000380281 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-202ENST00000380281 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
PRPF40B-202ENST00000380281 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
PRPF40B-202ENST00000380281 FBLN2P98095 1184 aa17.1■□□□□ 0.33
PRPF40B-202ENST00000380281 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
PRPF40B-202ENST00000380281 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-202ENST00000380281 NCOA2Q15596 1464 aa17.08■□□□□ 0.32
PRPF40B-202ENST00000380281 TOPBP1Q92547 1522 aa17.07■□□□□ 0.32
PRPF40B-202ENST00000380281 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
PRPF40B-202ENST00000380281 NAIPQ13075 1403 aa17.07■□□□□ 0.32
PRPF40B-202ENST00000380281 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
PRPF40B-202ENST00000380281 UACAQ9BZF9 1416 aa17.05■□□□□ 0.32
PRPF40B-202ENST00000380281 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
PRPF40B-202ENST00000380281 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
PRPF40B-202ENST00000380281 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-202ENST00000380281 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
PRPF40B-202ENST00000380281 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.31
PRPF40B-202ENST00000380281 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
PRPF40B-202ENST00000380281 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
PRPF40B-202ENST00000380281 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-202ENST00000380281 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-202ENST00000380281 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
PRPF40B-202ENST00000380281 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
PRPF40B-202ENST00000380281 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
PRPF40B-202ENST00000380281 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
PRPF40B-202ENST00000380281 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
PRPF40B-202ENST00000380281 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
PRPF40B-202ENST00000380281 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-202ENST00000380281 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-202ENST00000380281 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
PRPF40B-202ENST00000380281 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
PRPF40B-202ENST00000380281 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms