RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 IPO9Q96P70 1041 aaKnown RBP9.89□□□□□ -0.83
DDX58-202ENST00000379883 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
DDX58-202ENST00000379883 IRX6P78412 446 aaPredicted RBP9.89□□□□□ -0.83
DDX58-202ENST00000379883 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
DDX58-202ENST00000379883 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
DDX58-202ENST00000379883 SETD5Q9C0A6 1442 aa9.86□□□□□ -0.83
DDX58-202ENST00000379883 RAB3GAP2Q9H2M9 1393 aa9.86□□□□□ -0.83
DDX58-202ENST00000379883 SMARCA2P51531 1590 aa9.86□□□□□ -0.83
DDX58-202ENST00000379883 GLIPR1L2Q4G1C9 344 aa9.85□□□□□ -0.83
DDX58-202ENST00000379883 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
DDX58-202ENST00000379883 CCDC136Q96JN2 1154 aa9.84□□□□□ -0.83
DDX58-202ENST00000379883 EIF5BO60841 1220 aaKnown RBP9.82□□□□□ -0.84
DDX58-202ENST00000379883 B4GALNT3Q6L9W6 998 aa9.82□□□□□ -0.84
DDX58-202ENST00000379883 RAPGEF2Q9Y4G8 1499 aa9.81□□□□□ -0.84
DDX58-202ENST00000379883 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
DDX58-202ENST00000379883 DAXXQ9UER7 740 aaPredicted RBP9.8□□□□□ -0.84
DDX58-202ENST00000379883 RTN4Q9NQC3 1192 aaKnown RBP9.79□□□□□ -0.84
DDX58-202ENST00000379883 NEFMP07197 916 aa9.79□□□□□ -0.84
DDX58-202ENST00000379883 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
DDX58-202ENST00000379883 WDR97A6NE52 1622 aa9.78□□□□□ -0.84
DDX58-202ENST00000379883 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
DDX58-202ENST00000379883 FAM50AQ14320 339 aaKnown RBP9.78□□□□□ -0.84
DDX58-202ENST00000379883 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.84
DDX58-202ENST00000379883 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
DDX58-202ENST00000379883 IL27Q8NEV9 243 aa9.77□□□□□ -0.85
DDX58-202ENST00000379883 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
DDX58-202ENST00000379883 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
DDX58-202ENST00000379883 HIRIP3Q9BW71 556 aaPredicted RBP9.76□□□□□ -0.85
DDX58-202ENST00000379883 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
DDX58-202ENST00000379883 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
DDX58-202ENST00000379883 ERICH3Q5RHP9 1530 aa9.76□□□□□ -0.85
DDX58-202ENST00000379883 SMARCA4P51532 1647 aa9.75□□□□□ -0.85
DDX58-202ENST00000379883 WASHC2AQ641Q2 1341 aa9.74□□□□□ -0.85
DDX58-202ENST00000379883 ARAP1Q96P48 1450 aa9.74□□□□□ -0.85
DDX58-202ENST00000379883 MRS2Q9HD23 443 aa9.73□□□□□ -0.85
DDX58-202ENST00000379883 FAM9BQ8IZU0 186 aa9.73□□□□□ -0.85
DDX58-202ENST00000379883 TCERG1O14776 1098 aaKnown RBP9.72□□□□□ -0.85
DDX58-202ENST00000379883 NPM2Q86SE8 214 aaKnown RBP9.72□□□□□ -0.85
DDX58-202ENST00000379883 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
DDX58-202ENST00000379883 EIF4G2P78344 907 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX58-202ENST00000379883 GSE1Q14687 1217 aa9.7□□□□□ -0.86
DDX58-202ENST00000379883 WASHC2CQ9Y4E1 1318 aa9.69□□□□□ -0.86
DDX58-202ENST00000379883 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
DDX58-202ENST00000379883 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
DDX58-202ENST00000379883 MAP3K1Q13233 1512 aa9.68□□□□□ -0.86
DDX58-202ENST00000379883 NUDCQ9Y266 331 aa9.67□□□□□ -0.86
DDX58-202ENST00000379883 MS4A1P11836 297 aa9.67□□□□□ -0.86
DDX58-202ENST00000379883 PKNOX2Q96KN3 472 aa9.66□□□□□ -0.86
DDX58-202ENST00000379883 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
DDX58-202ENST00000379883 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
DDX58-202ENST00000379883 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
DDX58-202ENST00000379883 KIF27Q86VH2 1401 aa9.65□□□□□ -0.87
DDX58-202ENST00000379883 FAM43AQ8N2R8 423 aa9.64□□□□□ -0.87
DDX58-202ENST00000379883 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
DDX58-202ENST00000379883 PRKRIP1Q9H875 184 aaPredicted RBP9.63□□□□□ -0.87
DDX58-202ENST00000379883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDX58-202ENST00000379883 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
DDX58-202ENST00000379883 PDE4AP27815 886 aa9.61□□□□□ -0.87
DDX58-202ENST00000379883 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
DDX58-202ENST00000379883 LRRC9Q6ZRR7 1453 aa9.6□□□□□ -0.87
DDX58-202ENST00000379883 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
DDX58-202ENST00000379883 TIAM1Q13009 1591 aa9.6□□□□□ -0.87
DDX58-202ENST00000379883 UACAQ9BZF9 1416 aa9.59□□□□□ -0.87
DDX58-202ENST00000379883 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
DDX58-202ENST00000379883 L1TD1Q5T7N2 865 aaKnown RBP9.58□□□□□ -0.88
DDX58-202ENST00000379883 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
DDX58-202ENST00000379883 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
DDX58-202ENST00000379883 PHLDB1Q86UU1 1377 aa9.57□□□□□ -0.88
DDX58-202ENST00000379883 NFKBIBQ15653 356 aa9.56□□□□□ -0.88
DDX58-202ENST00000379883 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
DDX58-202ENST00000379883 CCDC18Q5T9S5 1454 aa9.56□□□□□ -0.88
DDX58-202ENST00000379883 CCDC7Q96M83 1385 aa9.55□□□□□ -0.88
DDX58-202ENST00000379883 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
DDX58-202ENST00000379883 NCAPD3P42695 1498 aa9.55□□□□□ -0.88
DDX58-202ENST00000379883 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
DDX58-202ENST00000379883 AKNAQ7Z591 1439 aa9.54□□□□□ -0.88
DDX58-202ENST00000379883 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
DDX58-202ENST00000379883 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
DDX58-202ENST00000379883 RRP1P56182 461 aaKnown RBP9.52□□□□□ -0.88
DDX58-202ENST00000379883 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.89
DDX58-202ENST00000379883 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
DDX58-202ENST00000379883 HSP90AA2PQ14568 343 aaPredicted RBP9.51□□□□□ -0.89
DDX58-202ENST00000379883 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
DDX58-202ENST00000379883 VSIG10Q8N0Z9 540 aa9.51□□□□□ -0.89
DDX58-202ENST00000379883 HFM1A2PYH4 1435 aa9.51□□□□□ -0.89
DDX58-202ENST00000379883 NAP1L5Q96NT1 182 aaPredicted RBP9.5□□□□□ -0.89
DDX58-202ENST00000379883 BIVM-ERCC5R4GMW8 1640 aa9.5□□□□□ -0.89
DDX58-202ENST00000379883 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
DDX58-202ENST00000379883 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
DDX58-202ENST00000379883 RRP9O43818 475 aaKnown RBP9.49□□□□□ -0.89
DDX58-202ENST00000379883 BECN1Q14457 450 aa9.49□□□□□ -0.89
DDX58-202ENST00000379883 PNNQ9H307 717 aaKnown RBP9.49□□□□□ -0.89
DDX58-202ENST00000379883 POLR3GLQ9BT43 218 aa9.48□□□□□ -0.89
DDX58-202ENST00000379883 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
DDX58-202ENST00000379883 ARID4BQ4LE39 1312 aaPredicted RBP9.47□□□□□ -0.89
DDX58-202ENST00000379883 MTUS2Q5JR59 1369 aa9.47□□□□□ -0.89
DDX58-202ENST00000379883 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
DDX58-202ENST00000379883 ROCK2O75116 1388 aaKnown RBP9.47□□□□□ -0.89
DDX58-202ENST00000379883 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
DDX58-202ENST00000379883 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms