RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
NFX1-202ENST00000379521 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
NFX1-202ENST00000379521 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
NFX1-202ENST00000379521 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
NFX1-202ENST00000379521 CARMIL1Q5VZK9 1371 aa10.78□□□□□ -0.68
NFX1-202ENST00000379521 LRRC9Q6ZRR7 1453 aa10.77□□□□□ -0.69
NFX1-202ENST00000379521 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
NFX1-202ENST00000379521 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
NFX1-202ENST00000379521 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
NFX1-202ENST00000379521 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
NFX1-202ENST00000379521 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
NFX1-202ENST00000379521 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
NFX1-202ENST00000379521 TCOF1Q13428 1488 aaKnown RBP10.71□□□□□ -0.7
NFX1-202ENST00000379521 FHAD1B1AJZ9 1412 aa10.71□□□□□ -0.7
NFX1-202ENST00000379521 IQGAP2Q13576 1575 aa10.71□□□□□ -0.7
NFX1-202ENST00000379521 SHROOM2Q13796 1616 aa10.7□□□□□ -0.7
NFX1-202ENST00000379521 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
NFX1-202ENST00000379521 CLSPNQ9HAW4 1339 aa10.69□□□□□ -0.7
NFX1-202ENST00000379521 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
NFX1-202ENST00000379521 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
NFX1-202ENST00000379521 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
NFX1-202ENST00000379521 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
NFX1-202ENST00000379521 SUPT6HQ7KZ85 1726 aaKnown RBP10.66□□□□□ -0.7
NFX1-202ENST00000379521 EHBP1L1Q8N3D4 1523 aa10.65□□□□□ -0.7
NFX1-202ENST00000379521 CROCC2H7BZ55 1655 aa10.65□□□□□ -0.7
NFX1-202ENST00000379521 CEP170Q5SW79 1584 aa10.65□□□□□ -0.71
NFX1-202ENST00000379521 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
NFX1-202ENST00000379521 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
NFX1-202ENST00000379521 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
NFX1-202ENST00000379521 NUP160Q12769 1436 aa10.62□□□□□ -0.71
NFX1-202ENST00000379521 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
NFX1-202ENST00000379521 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
NFX1-202ENST00000379521 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
NFX1-202ENST00000379521 KIAA0586Q9BVV6 1533 aa10.6□□□□□ -0.71
NFX1-202ENST00000379521 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
NFX1-202ENST00000379521 DHX57Q6P158 1386 aaKnown RBP10.6□□□□□ -0.71
NFX1-202ENST00000379521 RAPGEF6Q8TEU7 1601 aa10.58□□□□□ -0.72
NFX1-202ENST00000379521 ABCA8O94911 1581 aa10.58□□□□□ -0.72
NFX1-202ENST00000379521 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
NFX1-202ENST00000379521 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
NFX1-202ENST00000379521 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
NFX1-202ENST00000379521 PHLDB1Q86UU1 1377 aa10.57□□□□□ -0.72
NFX1-202ENST00000379521 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
NFX1-202ENST00000379521 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
NFX1-202ENST00000379521 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
NFX1-202ENST00000379521 DENND4BO75064 1496 aaPredicted RBP10.55□□□□□ -0.72
NFX1-202ENST00000379521 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
NFX1-202ENST00000379521 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
NFX1-202ENST00000379521 ADGBQ8N7X0 1667 aa10.55□□□□□ -0.72
NFX1-202ENST00000379521 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
NFX1-202ENST00000379521 FHOD3Q2V2M9 1422 aa10.53□□□□□ -0.72
NFX1-202ENST00000379521 ITSN2Q9NZM3 1697 aa10.52□□□□□ -0.73
NFX1-202ENST00000379521 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
NFX1-202ENST00000379521 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
NFX1-202ENST00000379521 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
NFX1-202ENST00000379521 NUP153P49790 1475 aaKnown RBP10.5□□□□□ -0.73
NFX1-202ENST00000379521 CDC42BPAQ5VT25 1732 aa10.5□□□□□ -0.73
NFX1-202ENST00000379521 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
NFX1-202ENST00000379521 NCOA2Q15596 1464 aa10.49□□□□□ -0.73
NFX1-202ENST00000379521 PTPRKQ15262 1439 aa10.49□□□□□ -0.73
NFX1-202ENST00000379521 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
NFX1-202ENST00000379521 CHD1O14646 1710 aa10.48□□□□□ -0.73
NFX1-202ENST00000379521 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
NFX1-202ENST00000379521 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
NFX1-202ENST00000379521 ADGRL2O95490 1459 aa10.46□□□□□ -0.73
NFX1-202ENST00000379521 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
NFX1-202ENST00000379521 KDM6BO15054 1643 aa10.45□□□□□ -0.74
NFX1-202ENST00000379521 ABCC10Q5T3U5 1492 aa10.45□□□□□ -0.74
NFX1-202ENST00000379521 MAST1Q9Y2H9 1570 aa10.44□□□□□ -0.74
NFX1-202ENST00000379521 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
NFX1-202ENST00000379521 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
NFX1-202ENST00000379521 NAIPQ13075 1403 aa10.42□□□□□ -0.74
NFX1-202ENST00000379521 ROCK1Q13464 1354 aa10.42□□□□□ -0.74
NFX1-202ENST00000379521 CDC42BPBQ9Y5S2 1711 aa10.41□□□□□ -0.74
NFX1-202ENST00000379521 PREX2Q70Z35 1606 aa10.41□□□□□ -0.74
NFX1-202ENST00000379521 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
NFX1-202ENST00000379521 KIF14Q15058 1648 aa10.4□□□□□ -0.74
NFX1-202ENST00000379521 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
NFX1-202ENST00000379521 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
NFX1-202ENST00000379521 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
NFX1-202ENST00000379521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
NFX1-202ENST00000379521 TIMELESSQ9UNS1 1208 aa10.36□□□□□ -0.75
NFX1-202ENST00000379521 UHRF1BP1LA0JNW5 1464 aa10.36□□□□□ -0.75
NFX1-202ENST00000379521 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
NFX1-202ENST00000379521 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
NFX1-202ENST00000379521 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
NFX1-202ENST00000379521 UNC13BO14795 1591 aa10.34□□□□□ -0.75
NFX1-202ENST00000379521 MAGI2Q86UL8 1455 aa10.33□□□□□ -0.76
NFX1-202ENST00000379521 PTPRGP23470 1445 aa10.32□□□□□ -0.76
NFX1-202ENST00000379521 GPATCH8Q9UKJ3 1502 aaKnown RBP10.32□□□□□ -0.76
NFX1-202ENST00000379521 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
NFX1-202ENST00000379521 BCORL1Q5H9F3 1711 aa10.32□□□□□ -0.76
NFX1-202ENST00000379521 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
NFX1-202ENST00000379521 DAPK1P53355 1430 aa10.3□□□□□ -0.76
NFX1-202ENST00000379521 DEPDC5O75140 1603 aa10.3□□□□□ -0.76
NFX1-202ENST00000379521 ABCC5O15440 1437 aa10.3□□□□□ -0.76
NFX1-202ENST00000379521 SAMD9LQ8IVG5 1584 aa10.3□□□□□ -0.76
NFX1-202ENST00000379521 NEURL4Q96JN8 1562 aa10.29□□□□□ -0.76
NFX1-202ENST00000379521 ACIN1Q9UKV3 1341 aaKnown RBP10.29□□□□□ -0.76
NFX1-202ENST00000379521 LAMC1P11047 1609 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms