RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 CLASP1Q7Z460 1538 aa39.92■■■■□ 3.98
TM6SF1-204ENST00000379390 UBTFP17480 764 aaKnown RBP39.88■■■■□ 3.97
TM6SF1-204ENST00000379390 LOC105371045A0A1W2PR82 267 aa39.87■■■■□ 3.97
TM6SF1-204ENST00000379390 KIAA0586Q9BVV6 1533 aa39.86■■■■□ 3.97
TM6SF1-204ENST00000379390 IQGAP2Q13576 1575 aa39.85■■■■□ 3.97
TM6SF1-204ENST00000379390 SHROOM2Q13796 1616 aa39.71■■■■□ 3.95
TM6SF1-204ENST00000379390 TNIKQ9UKE5 1360 aa39.67■■■■□ 3.94
TM6SF1-204ENST00000379390 RANGAP1P46060 587 aaPredicted RBP39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 JPH4Q96JJ6 628 aa39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 UGGT2Q9NYU1 1516 aa39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 ERCC6L2Q5T890 1561 aa39.52■■■■□ 3.92
TM6SF1-204ENST00000379390 PRG4Q92954 1404 aaPredicted RBP39.52■■■■□ 3.92
TM6SF1-204ENST00000379390 DISP1Q96F81 1524 aa39.47■■■■□ 3.91
TM6SF1-204ENST00000379390 SAMD9Q5K651 1589 aa39.47■■■■□ 3.91
TM6SF1-204ENST00000379390 KIAA0556O60303 1618 aa39.46■■■■□ 3.91
TM6SF1-204ENST00000379390 CEP162Q5TB80 1403 aa39.43■■■■□ 3.9
TM6SF1-204ENST00000379390 ARHGEF11O15085 1522 aa39.41■■■■□ 3.9
TM6SF1-204ENST00000379390 EFCAB5A4FU69 1503 aa39.41■■■■□ 3.9
TM6SF1-204ENST00000379390 CARMIL2Q6F5E8 1435 aa39.39■■■■□ 3.9
TM6SF1-204ENST00000379390 CLIP1P30622 1438 aa39.38■■■■□ 3.9
TM6SF1-204ENST00000379390 RIMBP3CA6NJZ7 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 RIMBP3BA6NNM3 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 RIMBP3Q9UFD9 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 ARHGAP35Q9NRY4 1499 aa39.36■■■■□ 3.89
TM6SF1-204ENST00000379390 P3H3Q8IVL6 736 aa39.33■■■■□ 3.89
TM6SF1-204ENST00000379390 FHOD3Q2V2M9 1422 aa39.27■■■■□ 3.88
TM6SF1-204ENST00000379390 DNAJC5Q9H3Z4 198 aa39.23■■■■□ 3.87
TM6SF1-204ENST00000379390 TTBK1Q5TCY1 1321 aaPredicted RBP39.21■■■■□ 3.87
TM6SF1-204ENST00000379390 ARAP1Q96P48 1450 aa39.19■■■■□ 3.86
TM6SF1-204ENST00000379390 PTPRGP23470 1445 aa39.12■■■■□ 3.85
TM6SF1-204ENST00000379390 FMN1Q68DA7 1419 aa38.99■■■■□ 3.83
TM6SF1-204ENST00000379390 PLB1Q6P1J6 1458 aa38.98■■■■□ 3.83
TM6SF1-204ENST00000379390 CYB5RLQ6IPT4 315 aa38.95■■■■□ 3.83
TM6SF1-204ENST00000379390 RAPGEF6Q8TEU7 1601 aa38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 ABCA8O94911 1581 aa38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 PCF11O94913 1555 aaKnown RBP38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 ADCY10Q96PN6 1610 aa38.9■■■■□ 3.82
TM6SF1-204ENST00000379390 UACAQ9BZF9 1416 aa38.89■■■■□ 3.82
TM6SF1-204ENST00000379390 VPS8Q8N3P4 1428 aa38.87■■■■□ 3.81
TM6SF1-204ENST00000379390 ABCC2Q92887 1545 aa38.85■■■■□ 3.81
TM6SF1-204ENST00000379390 HECW1Q76N89 1606 aa38.81■■■■□ 3.8
TM6SF1-204ENST00000379390 LRRIQ1Q96JM4 1722 aa38.8■■■■□ 3.8
TM6SF1-204ENST00000379390 UHRF1BP1LA0JNW5 1464 aa38.79■■■■□ 3.8
TM6SF1-204ENST00000379390 CASKIN1Q8WXD9 1431 aa38.79■■■■□ 3.8
TM6SF1-204ENST00000379390 FYCO1Q9BQS8 1478 aa38.78■■■■□ 3.8
TM6SF1-204ENST00000379390 NUP153P49790 1475 aaKnown RBP38.77■■■■□ 3.8
TM6SF1-204ENST00000379390 ATP1B4Q9UN42 357 aaPredicted RBP38.75■■■■□ 3.79
TM6SF1-204ENST00000379390 ARID3CA6NKF2 412 aa38.71■■■■□ 3.79
TM6SF1-204ENST00000379390 ZCCHC11Q5TAX3 1644 aaKnown RBP38.68■■■■□ 3.78
TM6SF1-204ENST00000379390 CDK13Q14004 1512 aaKnown RBP38.64■■■■□ 3.78
TM6SF1-204ENST00000379390 EPRSP07814 1512 aaKnown RBP38.63■■■■□ 3.77
TM6SF1-204ENST00000379390 KDM5BQ9UGL1 1544 aa38.63■■■■□ 3.77
TM6SF1-204ENST00000379390 ATP10BO94823 1461 aa38.6■■■■□ 3.77
TM6SF1-204ENST00000379390 CCDC18Q5T9S5 1454 aa38.56■■■■□ 3.76
TM6SF1-204ENST00000379390 CFAP43Q8NDM7 1665 aa38.55■■■■□ 3.76
TM6SF1-204ENST00000379390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.51■■■■□ 3.76
TM6SF1-204ENST00000379390 HNRNPUL2Q1KMD3 747 aaKnown RBP38.51■■■■□ 3.76
TM6SF1-204ENST00000379390 NPM1P06748 294 aaKnown RBP eCLIP38.5■■■■□ 3.75
TM6SF1-204ENST00000379390 TIAM1Q13009 1591 aa38.48■■■■□ 3.75
TM6SF1-204ENST00000379390 MAPKBP1O60336 1514 aa38.4■■■■□ 3.74
TM6SF1-204ENST00000379390 MAP3K1Q13233 1512 aa38.38■■■■□ 3.73
TM6SF1-204ENST00000379390 MAGI3Q5TCQ9 1506 aa38.38■■■■□ 3.73
TM6SF1-204ENST00000379390 ASXL2Q76L83 1435 aa38.37■■■■□ 3.73
TM6SF1-204ENST00000379390 APLP2Q06481 763 aa38.37■■■■□ 3.73
TM6SF1-204ENST00000379390 WDR7Q9Y4E6 1490 aa38.32■■■■□ 3.72
TM6SF1-204ENST00000379390 CDK11AQ9UQ88 783 aaPredicted RBP38.28■■■■□ 3.72
TM6SF1-204ENST00000379390 PLEKHD1A6NEE1 506 aa38.27■■■■□ 3.72
TM6SF1-204ENST00000379390 MTUS2Q5JR59 1369 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 LRRC9Q6ZRR7 1453 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 EHBP1L1Q8N3D4 1523 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 TROQ12816 1431 aaPredicted RBP38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 KANK4Q5T7N3 995 aaPredicted RBP38.23■■■■□ 3.71
TM6SF1-204ENST00000379390 KIF14Q15058 1648 aa38.22■■■■□ 3.71
TM6SF1-204ENST00000379390 KCNH8Q96L42 1107 aa38.17■■■■□ 3.7
TM6SF1-204ENST00000379390 DIP2BQ9P265 1576 aa38.15■■■■□ 3.7
TM6SF1-204ENST00000379390 PPARGC1BQ86YN6 1023 aaKnown RBP38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 SUPT6HQ7KZ85 1726 aaKnown RBP38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 KIF13AQ9H1H9 1805 aa38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 ABCC10Q5T3U5 1492 aa38.09■■■■□ 3.69
TM6SF1-204ENST00000379390 TTC37Q6PGP7 1564 aa38.08■■■■□ 3.69
TM6SF1-204ENST00000379390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.07■■■■□ 3.68
TM6SF1-204ENST00000379390 ABCA9Q8IUA7 1624 aa38.05■■■■□ 3.68
TM6SF1-204ENST00000379390 GLI2P10070 1586 aa38.01■■■■□ 3.68
TM6SF1-204ENST00000379390 NCOA2Q15596 1464 aa38.01■■■■□ 3.68
TM6SF1-204ENST00000379390 MYO5CQ9NQX4 1742 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 MAP3K4Q9Y6R4 1608 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 CDC42BPAQ5VT25 1732 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 FAM69CQ0P6D2 419 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 TSPOAP1O95153 1857 aa37.95■■■■□ 3.66
TM6SF1-204ENST00000379390 ITSN2Q9NZM3 1697 aa37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 TRHP20396 242 aaPredicted RBP37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 PREX2Q70Z35 1606 aa37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 CDC42BPBQ9Y5S2 1711 aa37.88■■■■□ 3.65
TM6SF1-204ENST00000379390 CCNB3Q8WWL7 1395 aa37.85■■■■□ 3.65
TM6SF1-204ENST00000379390 CD109Q6YHK3 1445 aa37.85■■■■□ 3.65
TM6SF1-204ENST00000379390 PHLDB1Q86UU1 1377 aa37.83■■■■□ 3.65
TM6SF1-204ENST00000379390 GPATCH8Q9UKJ3 1502 aaKnown RBP37.82■■■■□ 3.65
TM6SF1-204ENST00000379390 PPRC1Q5VV67 1664 aaKnown RBP37.82■■■■□ 3.64
TM6SF1-204ENST00000379390 MYOM3Q5VTT5 1437 aa37.77■■■■□ 3.64
TM6SF1-204ENST00000379390 ARHGAP5Q13017 1502 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms