RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 CLASP1Q7Z460 1538 aa39.92■■■■□ 3.98
TM6SF1-204ENST00000379390 UBTFP17480 764 aaKnown RBP39.88■■■■□ 3.97
TM6SF1-204ENST00000379390 LOC105371045A0A1W2PR82 267 aa39.87■■■■□ 3.97
TM6SF1-204ENST00000379390 KIAA0586Q9BVV6 1533 aa39.86■■■■□ 3.97
TM6SF1-204ENST00000379390 IQGAP2Q13576 1575 aa39.85■■■■□ 3.97
TM6SF1-204ENST00000379390 SHROOM2Q13796 1616 aa39.71■■■■□ 3.95
TM6SF1-204ENST00000379390 TNIKQ9UKE5 1360 aa39.67■■■■□ 3.94
TM6SF1-204ENST00000379390 RANGAP1P46060 587 aaPredicted RBP39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 JPH4Q96JJ6 628 aa39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 UGGT2Q9NYU1 1516 aa39.6■■■■□ 3.93
TM6SF1-204ENST00000379390 ERCC6L2Q5T890 1561 aa39.52■■■■□ 3.92
TM6SF1-204ENST00000379390 PRG4Q92954 1404 aaPredicted RBP39.52■■■■□ 3.92
TM6SF1-204ENST00000379390 DISP1Q96F81 1524 aa39.47■■■■□ 3.91
TM6SF1-204ENST00000379390 SAMD9Q5K651 1589 aa39.47■■■■□ 3.91
TM6SF1-204ENST00000379390 KIAA0556O60303 1618 aa39.46■■■■□ 3.91
TM6SF1-204ENST00000379390 CEP162Q5TB80 1403 aa39.43■■■■□ 3.9
TM6SF1-204ENST00000379390 ARHGEF11O15085 1522 aa39.41■■■■□ 3.9
TM6SF1-204ENST00000379390 EFCAB5A4FU69 1503 aa39.41■■■■□ 3.9
TM6SF1-204ENST00000379390 CARMIL2Q6F5E8 1435 aa39.39■■■■□ 3.9
TM6SF1-204ENST00000379390 CLIP1P30622 1438 aa39.38■■■■□ 3.9
TM6SF1-204ENST00000379390 RIMBP3CA6NJZ7 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 RIMBP3BA6NNM3 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 RIMBP3Q9UFD9 1639 aa39.38■■■■□ 3.89
TM6SF1-204ENST00000379390 ARHGAP35Q9NRY4 1499 aa39.36■■■■□ 3.89
TM6SF1-204ENST00000379390 P3H3Q8IVL6 736 aa39.33■■■■□ 3.89
TM6SF1-204ENST00000379390 FHOD3Q2V2M9 1422 aa39.27■■■■□ 3.88
TM6SF1-204ENST00000379390 DNAJC5Q9H3Z4 198 aa39.23■■■■□ 3.87
TM6SF1-204ENST00000379390 TTBK1Q5TCY1 1321 aaPredicted RBP39.21■■■■□ 3.87
TM6SF1-204ENST00000379390 ARAP1Q96P48 1450 aa39.19■■■■□ 3.86
TM6SF1-204ENST00000379390 PTPRGP23470 1445 aa39.12■■■■□ 3.85
TM6SF1-204ENST00000379390 FMN1Q68DA7 1419 aa38.99■■■■□ 3.83
TM6SF1-204ENST00000379390 PLB1Q6P1J6 1458 aa38.98■■■■□ 3.83
TM6SF1-204ENST00000379390 CYB5RLQ6IPT4 315 aa38.95■■■■□ 3.83
TM6SF1-204ENST00000379390 RAPGEF6Q8TEU7 1601 aa38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 ABCA8O94911 1581 aa38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 PCF11O94913 1555 aaKnown RBP38.94■■■■□ 3.82
TM6SF1-204ENST00000379390 ADCY10Q96PN6 1610 aa38.9■■■■□ 3.82
TM6SF1-204ENST00000379390 UACAQ9BZF9 1416 aa38.89■■■■□ 3.82
TM6SF1-204ENST00000379390 VPS8Q8N3P4 1428 aa38.87■■■■□ 3.81
TM6SF1-204ENST00000379390 ABCC2Q92887 1545 aa38.85■■■■□ 3.81
TM6SF1-204ENST00000379390 HECW1Q76N89 1606 aa38.81■■■■□ 3.8
TM6SF1-204ENST00000379390 LRRIQ1Q96JM4 1722 aa38.8■■■■□ 3.8
TM6SF1-204ENST00000379390 UHRF1BP1LA0JNW5 1464 aa38.79■■■■□ 3.8
TM6SF1-204ENST00000379390 CASKIN1Q8WXD9 1431 aa38.79■■■■□ 3.8
TM6SF1-204ENST00000379390 FYCO1Q9BQS8 1478 aa38.78■■■■□ 3.8
TM6SF1-204ENST00000379390 NUP153P49790 1475 aaKnown RBP38.77■■■■□ 3.8
TM6SF1-204ENST00000379390 ATP1B4Q9UN42 357 aaPredicted RBP38.75■■■■□ 3.79
TM6SF1-204ENST00000379390 ARID3CA6NKF2 412 aa38.71■■■■□ 3.79
TM6SF1-204ENST00000379390 ZCCHC11Q5TAX3 1644 aaKnown RBP38.68■■■■□ 3.78
TM6SF1-204ENST00000379390 CDK13Q14004 1512 aaKnown RBP38.64■■■■□ 3.78
TM6SF1-204ENST00000379390 EPRSP07814 1512 aaKnown RBP38.63■■■■□ 3.77
TM6SF1-204ENST00000379390 KDM5BQ9UGL1 1544 aa38.63■■■■□ 3.77
TM6SF1-204ENST00000379390 ATP10BO94823 1461 aa38.6■■■■□ 3.77
TM6SF1-204ENST00000379390 CCDC18Q5T9S5 1454 aa38.56■■■■□ 3.76
TM6SF1-204ENST00000379390 CFAP43Q8NDM7 1665 aa38.55■■■■□ 3.76
TM6SF1-204ENST00000379390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.51■■■■□ 3.76
TM6SF1-204ENST00000379390 HNRNPUL2Q1KMD3 747 aaKnown RBP38.51■■■■□ 3.76
TM6SF1-204ENST00000379390 NPM1P06748 294 aaKnown RBP eCLIP38.5■■■■□ 3.75
TM6SF1-204ENST00000379390 TIAM1Q13009 1591 aa38.48■■■■□ 3.75
TM6SF1-204ENST00000379390 MAPKBP1O60336 1514 aa38.4■■■■□ 3.74
TM6SF1-204ENST00000379390 MAP3K1Q13233 1512 aa38.38■■■■□ 3.73
TM6SF1-204ENST00000379390 MAGI3Q5TCQ9 1506 aa38.38■■■■□ 3.73
TM6SF1-204ENST00000379390 ASXL2Q76L83 1435 aa38.37■■■■□ 3.73
TM6SF1-204ENST00000379390 APLP2Q06481 763 aa38.37■■■■□ 3.73
TM6SF1-204ENST00000379390 WDR7Q9Y4E6 1490 aa38.32■■■■□ 3.72
TM6SF1-204ENST00000379390 CDK11AQ9UQ88 783 aaPredicted RBP38.28■■■■□ 3.72
TM6SF1-204ENST00000379390 PLEKHD1A6NEE1 506 aa38.27■■■■□ 3.72
TM6SF1-204ENST00000379390 MTUS2Q5JR59 1369 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 LRRC9Q6ZRR7 1453 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 EHBP1L1Q8N3D4 1523 aa38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 TROQ12816 1431 aaPredicted RBP38.25■■■■□ 3.71
TM6SF1-204ENST00000379390 KANK4Q5T7N3 995 aaPredicted RBP38.23■■■■□ 3.71
TM6SF1-204ENST00000379390 KIF14Q15058 1648 aa38.22■■■■□ 3.71
TM6SF1-204ENST00000379390 KCNH8Q96L42 1107 aa38.17■■■■□ 3.7
TM6SF1-204ENST00000379390 DIP2BQ9P265 1576 aa38.15■■■■□ 3.7
TM6SF1-204ENST00000379390 PPARGC1BQ86YN6 1023 aaKnown RBP38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 SUPT6HQ7KZ85 1726 aaKnown RBP38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 KIF13AQ9H1H9 1805 aa38.14■■■■□ 3.7
TM6SF1-204ENST00000379390 ABCC10Q5T3U5 1492 aa38.09■■■■□ 3.69
TM6SF1-204ENST00000379390 TTC37Q6PGP7 1564 aa38.08■■■■□ 3.69
TM6SF1-204ENST00000379390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.07■■■■□ 3.68
TM6SF1-204ENST00000379390 ABCA9Q8IUA7 1624 aa38.05■■■■□ 3.68
TM6SF1-204ENST00000379390 GLI2P10070 1586 aa38.01■■■■□ 3.68
TM6SF1-204ENST00000379390 NCOA2Q15596 1464 aa38.01■■■■□ 3.68
TM6SF1-204ENST00000379390 MYO5CQ9NQX4 1742 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 MAP3K4Q9Y6R4 1608 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 CDC42BPAQ5VT25 1732 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 FAM69CQ0P6D2 419 aa37.97■■■■□ 3.67
TM6SF1-204ENST00000379390 TSPOAP1O95153 1857 aa37.95■■■■□ 3.66
TM6SF1-204ENST00000379390 ITSN2Q9NZM3 1697 aa37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 TRHP20396 242 aaPredicted RBP37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 PREX2Q70Z35 1606 aa37.89■■■■□ 3.66
TM6SF1-204ENST00000379390 CDC42BPBQ9Y5S2 1711 aa37.88■■■■□ 3.65
TM6SF1-204ENST00000379390 CCNB3Q8WWL7 1395 aa37.85■■■■□ 3.65
TM6SF1-204ENST00000379390 CD109Q6YHK3 1445 aa37.85■■■■□ 3.65
TM6SF1-204ENST00000379390 PHLDB1Q86UU1 1377 aa37.83■■■■□ 3.65
TM6SF1-204ENST00000379390 GPATCH8Q9UKJ3 1502 aaKnown RBP37.82■■■■□ 3.65
TM6SF1-204ENST00000379390 PPRC1Q5VV67 1664 aaKnown RBP37.82■■■■□ 3.64
TM6SF1-204ENST00000379390 MYOM3Q5VTT5 1437 aa37.77■■■■□ 3.64
TM6SF1-204ENST00000379390 ARHGAP5Q13017 1502 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms