RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
PCNA-201ENST00000379143 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
PCNA-201ENST00000379143 NUP160Q12769 1436 aa19.81■□□□□ 0.76
PCNA-201ENST00000379143 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
PCNA-201ENST00000379143 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
PCNA-201ENST00000379143 CEP170Q5SW79 1584 aa19.79■□□□□ 0.76
PCNA-201ENST00000379143 PRXQ9BXM0 1461 aa19.77■□□□□ 0.76
PCNA-201ENST00000379143 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
PCNA-201ENST00000379143 KIAA0586Q9BVV6 1533 aa19.69■□□□□ 0.74
PCNA-201ENST00000379143 KIF21BO75037 1637 aa19.66■□□□□ 0.74
PCNA-201ENST00000379143 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
PCNA-201ENST00000379143 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
PCNA-201ENST00000379143 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
PCNA-201ENST00000379143 JPH4Q96JJ6 628 aa19.61■□□□□ 0.73
PCNA-201ENST00000379143 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
PCNA-201ENST00000379143 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
PCNA-201ENST00000379143 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
PCNA-201ENST00000379143 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
PCNA-201ENST00000379143 ERCC6L2Q5T890 1561 aa19.49■□□□□ 0.71
PCNA-201ENST00000379143 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
PCNA-201ENST00000379143 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
PCNA-201ENST00000379143 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
PCNA-201ENST00000379143 KIAA0556O60303 1618 aa19.41■□□□□ 0.7
PCNA-201ENST00000379143 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
PCNA-201ENST00000379143 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
PCNA-201ENST00000379143 PTPRGP23470 1445 aa19.35■□□□□ 0.69
PCNA-201ENST00000379143 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
PCNA-201ENST00000379143 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
PCNA-201ENST00000379143 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
PCNA-201ENST00000379143 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
PCNA-201ENST00000379143 P3H3Q8IVL6 736 aa19.26■□□□□ 0.67
PCNA-201ENST00000379143 UACAQ9BZF9 1416 aa19.24■□□□□ 0.67
PCNA-201ENST00000379143 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
PCNA-201ENST00000379143 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
PCNA-201ENST00000379143 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
PCNA-201ENST00000379143 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
PCNA-201ENST00000379143 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
PCNA-201ENST00000379143 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
PCNA-201ENST00000379143 CLIP1P30622 1438 aa19.2■□□□□ 0.66
PCNA-201ENST00000379143 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
PCNA-201ENST00000379143 ABCA8O94911 1581 aa19.19■□□□□ 0.66
PCNA-201ENST00000379143 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
PCNA-201ENST00000379143 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
PCNA-201ENST00000379143 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
PCNA-201ENST00000379143 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.65
PCNA-201ENST00000379143 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
PCNA-201ENST00000379143 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
PCNA-201ENST00000379143 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
PCNA-201ENST00000379143 ABCC10Q5T3U5 1492 aa19.06■□□□□ 0.64
PCNA-201ENST00000379143 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
PCNA-201ENST00000379143 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
PCNA-201ENST00000379143 NUP153P49790 1475 aaKnown RBP19.04■□□□□ 0.64
PCNA-201ENST00000379143 ATP10BO94823 1461 aa19.01■□□□□ 0.63
PCNA-201ENST00000379143 CASKIN1Q8WXD9 1431 aa19.01■□□□□ 0.63
PCNA-201ENST00000379143 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
PCNA-201ENST00000379143 ASXL2Q76L83 1435 aa19■□□□□ 0.63
PCNA-201ENST00000379143 FYCO1Q9BQS8 1478 aa18.99■□□□□ 0.63
PCNA-201ENST00000379143 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
PCNA-201ENST00000379143 KDM6BO15054 1643 aa18.98■□□□□ 0.63
PCNA-201ENST00000379143 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
PCNA-201ENST00000379143 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
PCNA-201ENST00000379143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.97■□□□□ 0.63
PCNA-201ENST00000379143 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
PCNA-201ENST00000379143 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
PCNA-201ENST00000379143 WDR7Q9Y4E6 1490 aa18.96■□□□□ 0.63
PCNA-201ENST00000379143 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
PCNA-201ENST00000379143 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
PCNA-201ENST00000379143 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
PCNA-201ENST00000379143 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
PCNA-201ENST00000379143 PLEKHD1A6NEE1 506 aa18.91■□□□□ 0.62
PCNA-201ENST00000379143 CDK11AQ9UQ88 783 aaPredicted RBP18.91■□□□□ 0.62
PCNA-201ENST00000379143 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
PCNA-201ENST00000379143 GLI2P10070 1586 aa18.9■□□□□ 0.62
PCNA-201ENST00000379143 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
PCNA-201ENST00000379143 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
PCNA-201ENST00000379143 PPRC1Q5VV67 1664 aaKnown RBP18.81■□□□□ 0.6
PCNA-201ENST00000379143 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
PCNA-201ENST00000379143 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
PCNA-201ENST00000379143 TROQ12816 1431 aaPredicted RBP18.8■□□□□ 0.6
PCNA-201ENST00000379143 ABCA9Q8IUA7 1624 aa18.79■□□□□ 0.6
PCNA-201ENST00000379143 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
PCNA-201ENST00000379143 KIF14Q15058 1648 aa18.77■□□□□ 0.6
PCNA-201ENST00000379143 TIAM1Q13009 1591 aa18.77■□□□□ 0.59
PCNA-201ENST00000379143 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
PCNA-201ENST00000379143 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
PCNA-201ENST00000379143 MAGI3Q5TCQ9 1506 aa18.75■□□□□ 0.59
PCNA-201ENST00000379143 APLP2Q06481 763 aa18.74■□□□□ 0.59
PCNA-201ENST00000379143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.74■□□□□ 0.591e-10■■■■□ 24.1
PCNA-201ENST00000379143 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
PCNA-201ENST00000379143 EHBP1L1Q8N3D4 1523 aa18.72■□□□□ 0.59
PCNA-201ENST00000379143 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
PCNA-201ENST00000379143 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
PCNA-201ENST00000379143 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
PCNA-201ENST00000379143 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
PCNA-201ENST00000379143 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
PCNA-201ENST00000379143 FOXD1Q16676 465 aa18.65■□□□□ 0.58
PCNA-201ENST00000379143 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
PCNA-201ENST00000379143 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
PCNA-201ENST00000379143 CFAP74Q9C0B2 1584 aa18.64■□□□□ 0.57
PCNA-201ENST00000379143 PLCH2O75038 1416 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms