RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
GPCPD1-201ENST00000379019 EEA1Q15075 1411 aa11.5□□□□□ -0.57
GPCPD1-201ENST00000379019 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
GPCPD1-201ENST00000379019 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
GPCPD1-201ENST00000379019 RIMBP3CA6NJZ7 1639 aa11.47□□□□□ -0.57
GPCPD1-201ENST00000379019 RIMBP3BA6NNM3 1639 aa11.47□□□□□ -0.57
GPCPD1-201ENST00000379019 RIMBP3Q9UFD9 1639 aa11.47□□□□□ -0.57
GPCPD1-201ENST00000379019 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
GPCPD1-201ENST00000379019 ARHGEF11O15085 1522 aa11.46□□□□□ -0.58
GPCPD1-201ENST00000379019 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
GPCPD1-201ENST00000379019 MIER1Q8N108 512 aa11.43□□□□□ -0.58
GPCPD1-201ENST00000379019 KIAA0586Q9BVV6 1533 aa11.42□□□□□ -0.58
GPCPD1-201ENST00000379019 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
GPCPD1-201ENST00000379019 IGF1RP08069 1367 aa11.4□□□□□ -0.59
GPCPD1-201ENST00000379019 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
GPCPD1-201ENST00000379019 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
GPCPD1-201ENST00000379019 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
GPCPD1-201ENST00000379019 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
GPCPD1-201ENST00000379019 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
GPCPD1-201ENST00000379019 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
GPCPD1-201ENST00000379019 FBLN2P98095 1184 aa11.32□□□□□ -0.6
GPCPD1-201ENST00000379019 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
GPCPD1-201ENST00000379019 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
GPCPD1-201ENST00000379019 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
GPCPD1-201ENST00000379019 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
GPCPD1-201ENST00000379019 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
GPCPD1-201ENST00000379019 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
GPCPD1-201ENST00000379019 UHRF1BP1LA0JNW5 1464 aa11.28□□□□□ -0.6
GPCPD1-201ENST00000379019 KIF21BO75037 1637 aa11.28□□□□□ -0.6
GPCPD1-201ENST00000379019 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
GPCPD1-201ENST00000379019 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
GPCPD1-201ENST00000379019 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
GPCPD1-201ENST00000379019 MAPKBP1O60336 1514 aa11.23□□□□□ -0.61
GPCPD1-201ENST00000379019 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
GPCPD1-201ENST00000379019 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
GPCPD1-201ENST00000379019 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.61
GPCPD1-201ENST00000379019 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.62
GPCPD1-201ENST00000379019 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
GPCPD1-201ENST00000379019 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
GPCPD1-201ENST00000379019 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
GPCPD1-201ENST00000379019 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
GPCPD1-201ENST00000379019 ABCC2Q92887 1545 aa11.16□□□□□ -0.62
GPCPD1-201ENST00000379019 PTPRGP23470 1445 aa11.16□□□□□ -0.62
GPCPD1-201ENST00000379019 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
GPCPD1-201ENST00000379019 GLI2P10070 1586 aa11.15□□□□□ -0.62
GPCPD1-201ENST00000379019 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
GPCPD1-201ENST00000379019 PLB1Q6P1J6 1458 aa11.14□□□□□ -0.63
GPCPD1-201ENST00000379019 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
GPCPD1-201ENST00000379019 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
GPCPD1-201ENST00000379019 UACAQ9BZF9 1416 aa11.13□□□□□ -0.63
GPCPD1-201ENST00000379019 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
GPCPD1-201ENST00000379019 ADCY10Q96PN6 1610 aa11.12□□□□□ -0.63
GPCPD1-201ENST00000379019 KDM5BQ9UGL1 1544 aa11.11□□□□□ -0.63
GPCPD1-201ENST00000379019 ABCA8O94911 1581 aa11.1□□□□□ -0.63
GPCPD1-201ENST00000379019 ABCC10Q5T3U5 1492 aa11.09□□□□□ -0.63
GPCPD1-201ENST00000379019 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
GPCPD1-201ENST00000379019 KANK4Q5T7N3 995 aaPredicted RBP11.07□□□□□ -0.64
GPCPD1-201ENST00000379019 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
GPCPD1-201ENST00000379019 DIP2BQ9P265 1576 aa11.05□□□□□ -0.64
GPCPD1-201ENST00000379019 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
GPCPD1-201ENST00000379019 TEX14Q8IWB6 1497 aa11.03□□□□□ -0.64
GPCPD1-201ENST00000379019 ZCCHC11Q5TAX3 1644 aaKnown RBP11.03□□□□□ -0.64
GPCPD1-201ENST00000379019 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
GPCPD1-201ENST00000379019 FMN1Q68DA7 1419 aa11.02□□□□□ -0.64
GPCPD1-201ENST00000379019 HIRIP3Q9BW71 556 aaPredicted RBP11.02□□□□□ -0.64
GPCPD1-201ENST00000379019 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.65
GPCPD1-201ENST00000379019 CLIP1P30622 1438 aa11.01□□□□□ -0.65
GPCPD1-201ENST00000379019 KIF13AQ9H1H9 1805 aa11.01□□□□□ -0.65
GPCPD1-201ENST00000379019 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
GPCPD1-201ENST00000379019 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
GPCPD1-201ENST00000379019 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
GPCPD1-201ENST00000379019 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
GPCPD1-201ENST00000379019 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
GPCPD1-201ENST00000379019 BCANQ96GW7 911 aa10.98□□□□□ -0.65
GPCPD1-201ENST00000379019 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
GPCPD1-201ENST00000379019 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
GPCPD1-201ENST00000379019 DHX57Q6P158 1386 aaKnown RBP10.97□□□□□ -0.65
GPCPD1-201ENST00000379019 EPRSP07814 1512 aaKnown RBP10.96□□□□□ -0.65
GPCPD1-201ENST00000379019 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
GPCPD1-201ENST00000379019 ARAP3Q8WWN8 1544 aa10.95□□□□□ -0.66
GPCPD1-201ENST00000379019 CENPBP07199 599 aaPredicted RBP10.95□□□□□ -0.66
GPCPD1-201ENST00000379019 MSH5O43196 834 aa10.94□□□□□ -0.66
GPCPD1-201ENST00000379019 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
GPCPD1-201ENST00000379019 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
GPCPD1-201ENST00000379019 ITGAEP38570 1179 aa10.92□□□□□ -0.66
GPCPD1-201ENST00000379019 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
GPCPD1-201ENST00000379019 NEO1Q92859 1461 aa10.91□□□□□ -0.66
GPCPD1-201ENST00000379019 ATP10BO94823 1461 aa10.9□□□□□ -0.67
GPCPD1-201ENST00000379019 CASKIN1Q8WXD9 1431 aa10.9□□□□□ -0.67
GPCPD1-201ENST00000379019 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
GPCPD1-201ENST00000379019 NUP153P49790 1475 aaKnown RBP10.89□□□□□ -0.67
GPCPD1-201ENST00000379019 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
GPCPD1-201ENST00000379019 KDM6BO15054 1643 aa10.87□□□□□ -0.67
GPCPD1-201ENST00000379019 PPRC1Q5VV67 1664 aaKnown RBP10.87□□□□□ -0.67
GPCPD1-201ENST00000379019 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
GPCPD1-201ENST00000379019 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
GPCPD1-201ENST00000379019 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
GPCPD1-201ENST00000379019 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
GPCPD1-201ENST00000379019 KIF14Q15058 1648 aa10.84□□□□□ -0.67
GPCPD1-201ENST00000379019 BCL11AQ9H165 835 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms