RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
CCDC107-204ENST00000378409 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
CCDC107-204ENST00000378409 NUP160Q12769 1436 aa25.45■■□□□ 1.66
CCDC107-204ENST00000378409 IQGAP2Q13576 1575 aa25.43■■□□□ 1.66
CCDC107-204ENST00000378409 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.66
CCDC107-204ENST00000378409 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
CCDC107-204ENST00000378409 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
CCDC107-204ENST00000378409 CLASP1Q7Z460 1538 aa25.31■■□□□ 1.64
CCDC107-204ENST00000378409 CLIP1P30622 1438 aa25.3■■□□□ 1.64
CCDC107-204ENST00000378409 UGGT2Q9NYU1 1516 aa25.26■■□□□ 1.63
CCDC107-204ENST00000378409 SAMD9Q5K651 1589 aa25.24■■□□□ 1.63
CCDC107-204ENST00000378409 EFCAB5A4FU69 1503 aa25.24■■□□□ 1.63
CCDC107-204ENST00000378409 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
CCDC107-204ENST00000378409 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
CCDC107-204ENST00000378409 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
CCDC107-204ENST00000378409 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
CCDC107-204ENST00000378409 KIAA0556O60303 1618 aa25.17■■□□□ 1.62
CCDC107-204ENST00000378409 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
CCDC107-204ENST00000378409 DISP1Q96F81 1524 aa25.14■■□□□ 1.62
CCDC107-204ENST00000378409 P3H3Q8IVL6 736 aa25.13■■□□□ 1.61
CCDC107-204ENST00000378409 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
CCDC107-204ENST00000378409 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
CCDC107-204ENST00000378409 CARMIL2Q6F5E8 1435 aa25.11■■□□□ 1.61
CCDC107-204ENST00000378409 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
CCDC107-204ENST00000378409 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
CCDC107-204ENST00000378409 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
CCDC107-204ENST00000378409 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
CCDC107-204ENST00000378409 PCF11O94913 1555 aaKnown RBP24.94■■□□□ 1.58
CCDC107-204ENST00000378409 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
CCDC107-204ENST00000378409 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
CCDC107-204ENST00000378409 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
CCDC107-204ENST00000378409 PTPRGP23470 1445 aa24.89■■□□□ 1.58
CCDC107-204ENST00000378409 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
CCDC107-204ENST00000378409 RAPGEF6Q8TEU7 1601 aa24.87■■□□□ 1.57
CCDC107-204ENST00000378409 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
CCDC107-204ENST00000378409 CASKIN1Q8WXD9 1431 aa24.86■■□□□ 1.57
CCDC107-204ENST00000378409 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
CCDC107-204ENST00000378409 LRRIQ1Q96JM4 1722 aa24.83■■□□□ 1.57
CCDC107-204ENST00000378409 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.56
CCDC107-204ENST00000378409 ABCA8O94911 1581 aa24.82■■□□□ 1.56
CCDC107-204ENST00000378409 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
CCDC107-204ENST00000378409 CFAP43Q8NDM7 1665 aa24.75■■□□□ 1.55
CCDC107-204ENST00000378409 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
CCDC107-204ENST00000378409 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
CCDC107-204ENST00000378409 APLP2Q06481 763 aa24.73■■□□□ 1.55
CCDC107-204ENST00000378409 ABCC2Q92887 1545 aa24.72■■□□□ 1.55
CCDC107-204ENST00000378409 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
CCDC107-204ENST00000378409 EPRSP07814 1512 aaKnown RBP24.7■■□□□ 1.54
CCDC107-204ENST00000378409 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.54
CCDC107-204ENST00000378409 ADCY10Q96PN6 1610 aa24.68■■□□□ 1.54
CCDC107-204ENST00000378409 CDK13Q14004 1512 aaKnown RBP24.68■■□□□ 1.54
CCDC107-204ENST00000378409 UHRF1BP1LA0JNW5 1464 aa24.67■■□□□ 1.54
CCDC107-204ENST00000378409 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
CCDC107-204ENST00000378409 MAP3K1Q13233 1512 aa24.66■■□□□ 1.54
CCDC107-204ENST00000378409 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
CCDC107-204ENST00000378409 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
CCDC107-204ENST00000378409 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
CCDC107-204ENST00000378409 ATP10BO94823 1461 aa24.59■■□□□ 1.53
CCDC107-204ENST00000378409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
CCDC107-204ENST00000378409 HNRNPUL2Q1KMD3 747 aaKnown RBP24.59■■□□□ 1.53
CCDC107-204ENST00000378409 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
CCDC107-204ENST00000378409 LRRC9Q6ZRR7 1453 aa24.56■■□□□ 1.52
CCDC107-204ENST00000378409 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
CCDC107-204ENST00000378409 MAGI3Q5TCQ9 1506 aa24.53■■□□□ 1.52
CCDC107-204ENST00000378409 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
CCDC107-204ENST00000378409 MTUS2Q5JR59 1369 aa24.51■■□□□ 1.51
CCDC107-204ENST00000378409 CDK11AQ9UQ88 783 aaPredicted RBP24.5■■□□□ 1.51
CCDC107-204ENST00000378409 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
CCDC107-204ENST00000378409 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
CCDC107-204ENST00000378409 TRHP20396 242 aaPredicted RBP24.45■■□□□ 1.5
CCDC107-204ENST00000378409 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
CCDC107-204ENST00000378409 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
CCDC107-204ENST00000378409 KIF14Q15058 1648 aa24.41■■□□□ 1.5
CCDC107-204ENST00000378409 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
CCDC107-204ENST00000378409 WDR7Q9Y4E6 1490 aa24.37■■□□□ 1.49
CCDC107-204ENST00000378409 ASXL2Q76L83 1435 aa24.36■■□□□ 1.49
CCDC107-204ENST00000378409 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
CCDC107-204ENST00000378409 KCNH8Q96L42 1107 aa24.29■■□□□ 1.48
CCDC107-204ENST00000378409 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
CCDC107-204ENST00000378409 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
CCDC107-204ENST00000378409 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
CCDC107-204ENST00000378409 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
CCDC107-204ENST00000378409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.26■■□□□ 1.47
CCDC107-204ENST00000378409 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
CCDC107-204ENST00000378409 MYO5CQ9NQX4 1742 aa24.24■■□□□ 1.47
CCDC107-204ENST00000378409 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
CCDC107-204ENST00000378409 MYOM3Q5VTT5 1437 aa24.23■■□□□ 1.47
CCDC107-204ENST00000378409 ABCA9Q8IUA7 1624 aa24.22■■□□□ 1.47
CCDC107-204ENST00000378409 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
CCDC107-204ENST00000378409 CDC42BPBQ9Y5S2 1711 aa24.19■■□□□ 1.46
CCDC107-204ENST00000378409 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
CCDC107-204ENST00000378409 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
CCDC107-204ENST00000378409 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
CCDC107-204ENST00000378409 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
CCDC107-204ENST00000378409 RRBP1Q9P2E9 1410 aaKnown RBP24.15■■□□□ 1.46
CCDC107-204ENST00000378409 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.46
CCDC107-204ENST00000378409 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.45
CCDC107-204ENST00000378409 GLI2P10070 1586 aa24.12■■□□□ 1.45
CCDC107-204ENST00000378409 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
CCDC107-204ENST00000378409 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms