RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 KIF27Q86VH2 1401 aa33.8■■■■□ 3
PRDM16-202ENST00000378389 CUL7Q14999 1698 aa33.8■■■■□ 3
PRDM16-202ENST00000378389 KIAA0586Q9BVV6 1533 aa33.74■■■□□ 2.99
PRDM16-202ENST00000378389 KIF13AQ9H1H9 1805 aa33.66■■■□□ 2.98
PRDM16-202ENST00000378389 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
PRDM16-202ENST00000378389 ADCY10Q96PN6 1610 aa33.57■■■□□ 2.97
PRDM16-202ENST00000378389 CARMIL1Q5VZK9 1371 aa33.55■■■□□ 2.96
PRDM16-202ENST00000378389 ABCC10Q5T3U5 1492 aa33.54■■■□□ 2.96
PRDM16-202ENST00000378389 DIP2BQ9P265 1576 aa33.45■■■□□ 2.95
PRDM16-202ENST00000378389 NPM1P06748 294 aaKnown RBP eCLIP33.43■■■□□ 2.94
PRDM16-202ENST00000378389 IQGAP2Q13576 1575 aa33.38■■■□□ 2.93
PRDM16-202ENST00000378389 PTPRGP23470 1445 aa33.36■■■□□ 2.93
PRDM16-202ENST00000378389 FAM69CQ0P6D2 419 aa33.35■■■□□ 2.93
PRDM16-202ENST00000378389 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
PRDM16-202ENST00000378389 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
PRDM16-202ENST00000378389 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
PRDM16-202ENST00000378389 ABCC2Q92887 1545 aa33.27■■■□□ 2.92
PRDM16-202ENST00000378389 RAPGEF2Q9Y4G8 1499 aa33.26■■■□□ 2.92
PRDM16-202ENST00000378389 DISP1Q96F81 1524 aa33.26■■■□□ 2.91
PRDM16-202ENST00000378389 UHRF1BP1LA0JNW5 1464 aa33.25■■■□□ 2.91
PRDM16-202ENST00000378389 UGGT2Q9NYU1 1516 aa33.24■■■□□ 2.91
PRDM16-202ENST00000378389 UACAQ9BZF9 1416 aa33.15■■■□□ 2.9
PRDM16-202ENST00000378389 PLB1Q6P1J6 1458 aa33.13■■■□□ 2.89
PRDM16-202ENST00000378389 GLI2P10070 1586 aa33.13■■■□□ 2.89
PRDM16-202ENST00000378389 ASXL2Q76L83 1435 aa33.1■■■□□ 2.89
PRDM16-202ENST00000378389 KDM6BO15054 1643 aa33.1■■■□□ 2.89
PRDM16-202ENST00000378389 KIAA0556O60303 1618 aa33.1■■■□□ 2.89
PRDM16-202ENST00000378389 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
PRDM16-202ENST00000378389 TSPOAP1O95153 1857 aa33.05■■■□□ 2.88
PRDM16-202ENST00000378389 PPRC1Q5VV67 1664 aaKnown RBP33.01■■■□□ 2.87
PRDM16-202ENST00000378389 CTTNBP2Q8WZ74 1663 aa33.01■■■□□ 2.87
PRDM16-202ENST00000378389 TTBK1Q5TCY1 1321 aaPredicted RBP33■■■□□ 2.87
PRDM16-202ENST00000378389 PRXQ9BXM0 1461 aa32.99■■■□□ 2.87
PRDM16-202ENST00000378389 EPRSP07814 1512 aaKnown RBP32.94■■■□□ 2.86
PRDM16-202ENST00000378389 ZCCHC11Q5TAX3 1644 aaKnown RBP32.94■■■□□ 2.86
PRDM16-202ENST00000378389 GOLGA3Q08378 1498 aa32.91■■■□□ 2.86
PRDM16-202ENST00000378389 MAP3K4Q9Y6R4 1608 aa32.9■■■□□ 2.86
PRDM16-202ENST00000378389 ABCA8O94911 1581 aa32.83■■■□□ 2.85
PRDM16-202ENST00000378389 WDR7Q9Y4E6 1490 aa32.8■■■□□ 2.84
PRDM16-202ENST00000378389 TEX14Q8IWB6 1497 aa32.78■■■□□ 2.84
PRDM16-202ENST00000378389 KDM4FA0A1W2PPD8 638 aa32.76■■■□□ 2.83
PRDM16-202ENST00000378389 COL17A1Q9UMD9 1497 aaPredicted RBP32.74■■■□□ 2.83
PRDM16-202ENST00000378389 MAGI3Q5TCQ9 1506 aa32.65■■■□□ 2.82
PRDM16-202ENST00000378389 CFAP43Q8NDM7 1665 aa32.64■■■□□ 2.82
PRDM16-202ENST00000378389 SAMD9Q5K651 1589 aa32.6■■■□□ 2.81
PRDM16-202ENST00000378389 CSRNP3Q8WYN3 585 aa32.59■■■□□ 2.81
PRDM16-202ENST00000378389 EEA1Q15075 1411 aa32.57■■■□□ 2.8
PRDM16-202ENST00000378389 CD109Q6YHK3 1445 aa32.56■■■□□ 2.8
PRDM16-202ENST00000378389 ADGRL1O94910 1474 aa32.52■■■□□ 2.8
PRDM16-202ENST00000378389 ATP10BO94823 1461 aa32.51■■■□□ 2.79
PRDM16-202ENST00000378389 FAM9AQ8IZU1 332 aaPredicted RBP32.44■■■□□ 2.78
PRDM16-202ENST00000378389 KCNH8Q96L42 1107 aa32.43■■■□□ 2.78
PRDM16-202ENST00000378389 RAPGEF6Q8TEU7 1601 aa32.41■■■□□ 2.78
PRDM16-202ENST00000378389 ABCA9Q8IUA7 1624 aa32.4■■■□□ 2.78
PRDM16-202ENST00000378389 ARAP3Q8WWN8 1544 aa32.4■■■□□ 2.78
PRDM16-202ENST00000378389 P3H3Q8IVL6 736 aa32.38■■■□□ 2.77
PRDM16-202ENST00000378389 PHLDB1Q86UU1 1377 aa32.33■■■□□ 2.77
PRDM16-202ENST00000378389 NUP153P49790 1475 aaKnown RBP32.31■■■□□ 2.76
PRDM16-202ENST00000378389 KIF21BO75037 1637 aa32.31■■■□□ 2.76
PRDM16-202ENST00000378389 EFCAB5A4FU69 1503 aa32.26■■■□□ 2.75
PRDM16-202ENST00000378389 NEO1Q92859 1461 aa32.24■■■□□ 2.75
PRDM16-202ENST00000378389 ARID3CA6NKF2 412 aa32.24■■■□□ 2.75
PRDM16-202ENST00000378389 FHOD3Q2V2M9 1422 aa32.24■■■□□ 2.75
PRDM16-202ENST00000378389 FRMPD1Q5SYB0 1578 aa32.1■■■□□ 2.73
PRDM16-202ENST00000378389 HECW2Q9P2P5 1572 aa32.09■■■□□ 2.73
PRDM16-202ENST00000378389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.05■■■□□ 2.72
PRDM16-202ENST00000378389 HNRNPUL2Q1KMD3 747 aaKnown RBP32.05■■■□□ 2.72
PRDM16-202ENST00000378389 PLEKHD1A6NEE1 506 aa32.04■■■□□ 2.72
PRDM16-202ENST00000378389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.01■■■□□ 2.72
PRDM16-202ENST00000378389 RAPGEF3O95398 923 aa32.01■■■□□ 2.71
PRDM16-202ENST00000378389 RANGAP1P46060 587 aaPredicted RBP32.01■■■□□ 2.71
PRDM16-202ENST00000378389 ADAMTSL3P82987 1691 aa32.01■■■□□ 2.71
PRDM16-202ENST00000378389 CFAP74Q9C0B2 1584 aa31.99■■■□□ 2.71
PRDM16-202ENST00000378389 RICTORQ6R327 1708 aa31.97■■■□□ 2.71
PRDM16-202ENST00000378389 TTC37Q6PGP7 1564 aa31.96■■■□□ 2.71
PRDM16-202ENST00000378389 AKNAQ7Z591 1439 aa31.94■■■□□ 2.7
PRDM16-202ENST00000378389 FANCAO15360 1455 aa31.94■■■□□ 2.7
PRDM16-202ENST00000378389 DENND4BO75064 1496 aaPredicted RBP31.94■■■□□ 2.7
PRDM16-202ENST00000378389 ARHGEF40Q8TER5 1519 aa31.94■■■□□ 2.7
PRDM16-202ENST00000378389 FMN1Q68DA7 1419 aa31.92■■■□□ 2.7
PRDM16-202ENST00000378389 CDK13Q14004 1512 aaKnown RBP31.92■■■□□ 2.7
PRDM16-202ENST00000378389 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
PRDM16-202ENST00000378389 BCORL1Q5H9F3 1711 aa31.91■■■□□ 2.7
PRDM16-202ENST00000378389 ARHGAP35Q9NRY4 1499 aa31.91■■■□□ 2.7
PRDM16-202ENST00000378389 ZMYM4Q5VZL5 1548 aa31.9■■■□□ 2.7
PRDM16-202ENST00000378389 PTPRMP28827 1452 aa31.88■■■□□ 2.69
PRDM16-202ENST00000378389 HECW1Q76N89 1606 aa31.88■■■□□ 2.69
PRDM16-202ENST00000378389 UBTFP17480 764 aaKnown RBP31.83■■■□□ 2.69
PRDM16-202ENST00000378389 PLCH2O75038 1416 aa31.83■■■□□ 2.69
PRDM16-202ENST00000378389 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
PRDM16-202ENST00000378389 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
PRDM16-202ENST00000378389 ZFYVE16Q7Z3T8 1539 aa31.75■■■□□ 2.67
PRDM16-202ENST00000378389 POGZQ7Z3K3 1410 aa31.74■■■□□ 2.67
PRDM16-202ENST00000378389 ILDR1Q86SU0 546 aaPredicted RBP31.73■■■□□ 2.67
PRDM16-202ENST00000378389 MYO5CQ9NQX4 1742 aa31.72■■■□□ 2.67
PRDM16-202ENST00000378389 TROQ12816 1431 aaPredicted RBP31.7■■■□□ 2.67
PRDM16-202ENST00000378389 CDK11AQ9UQ88 783 aaPredicted RBP31.7■■■□□ 2.67
PRDM16-202ENST00000378389 SCAPERQ9BY12 1400 aa31.69■■■□□ 2.66
PRDM16-202ENST00000378389 YEATS2Q9ULM3 1422 aa31.69■■■□□ 2.66
PRDM16-202ENST00000378389 ARID4BQ4LE39 1312 aaPredicted RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms