RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
TPM2-204ENST00000378300 CHD1O14646 1710 aa22.57■■□□□ 1.2
TPM2-204ENST00000378300 CEP170Q5SW79 1584 aa22.54■■□□□ 1.2
TPM2-204ENST00000378300 CLIP1P30622 1438 aa22.54■■□□□ 1.2
TPM2-204ENST00000378300 NUP160Q12769 1436 aa22.5■■□□□ 1.19
TPM2-204ENST00000378300 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
TPM2-204ENST00000378300 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
TPM2-204ENST00000378300 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
TPM2-204ENST00000378300 P3H3Q8IVL6 736 aa22.4■■□□□ 1.18
TPM2-204ENST00000378300 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
TPM2-204ENST00000378300 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
TPM2-204ENST00000378300 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
TPM2-204ENST00000378300 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
TPM2-204ENST00000378300 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
TPM2-204ENST00000378300 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
TPM2-204ENST00000378300 CLASP1Q7Z460 1538 aa22.3■■□□□ 1.16
TPM2-204ENST00000378300 DISP1Q96F81 1524 aa22.29■■□□□ 1.16
TPM2-204ENST00000378300 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
TPM2-204ENST00000378300 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
TPM2-204ENST00000378300 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
TPM2-204ENST00000378300 SHROOM2Q13796 1616 aa22.23■■□□□ 1.15
TPM2-204ENST00000378300 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
TPM2-204ENST00000378300 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
TPM2-204ENST00000378300 CARMIL2Q6F5E8 1435 aa22.18■■□□□ 1.14
TPM2-204ENST00000378300 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
TPM2-204ENST00000378300 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
TPM2-204ENST00000378300 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
TPM2-204ENST00000378300 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
TPM2-204ENST00000378300 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
TPM2-204ENST00000378300 CASKIN1Q8WXD9 1431 aa22.08■■□□□ 1.12
TPM2-204ENST00000378300 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
TPM2-204ENST00000378300 PTPRGP23470 1445 aa22.03■■□□□ 1.12
TPM2-204ENST00000378300 PLB1Q6P1J6 1458 aa22.02■■□□□ 1.12
TPM2-204ENST00000378300 APLP2Q06481 763 aa22.01■■□□□ 1.11
TPM2-204ENST00000378300 LRRIQ1Q96JM4 1722 aa22■■□□□ 1.11
TPM2-204ENST00000378300 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
TPM2-204ENST00000378300 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
TPM2-204ENST00000378300 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
TPM2-204ENST00000378300 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
TPM2-204ENST00000378300 ABCA8O94911 1581 aa21.95■■□□□ 1.1
TPM2-204ENST00000378300 TIAM1Q13009 1591 aa21.95■■□□□ 1.1
TPM2-204ENST00000378300 NUP153P49790 1475 aaKnown RBP21.95■■□□□ 1.1
TPM2-204ENST00000378300 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
TPM2-204ENST00000378300 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
TPM2-204ENST00000378300 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
TPM2-204ENST00000378300 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
TPM2-204ENST00000378300 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
TPM2-204ENST00000378300 UACAQ9BZF9 1416 aa21.89■■□□□ 1.09
TPM2-204ENST00000378300 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
TPM2-204ENST00000378300 LRRC9Q6ZRR7 1453 aa21.86■■□□□ 1.09
TPM2-204ENST00000378300 ABCC2Q92887 1545 aa21.83■■□□□ 1.09
TPM2-204ENST00000378300 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
TPM2-204ENST00000378300 RIMBP3CA6NJZ7 1639 aa21.82■■□□□ 1.08
TPM2-204ENST00000378300 RIMBP3BA6NNM3 1639 aa21.82■■□□□ 1.08
TPM2-204ENST00000378300 RIMBP3Q9UFD9 1639 aa21.82■■□□□ 1.08
TPM2-204ENST00000378300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
TPM2-204ENST00000378300 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
TPM2-204ENST00000378300 ATP10BO94823 1461 aa21.81■■□□□ 1.08
TPM2-204ENST00000378300 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
TPM2-204ENST00000378300 UHRF1BP1LA0JNW5 1464 aa21.78■■□□□ 1.08
TPM2-204ENST00000378300 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
TPM2-204ENST00000378300 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
TPM2-204ENST00000378300 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
TPM2-204ENST00000378300 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
TPM2-204ENST00000378300 ZCCHC11Q5TAX3 1644 aaKnown RBP21.7■■□□□ 1.07
TPM2-204ENST00000378300 TRIM26Q12899 539 aaPredicted RBP21.7■■□□□ 1.06
TPM2-204ENST00000378300 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
TPM2-204ENST00000378300 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
TPM2-204ENST00000378300 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
TPM2-204ENST00000378300 TROQ12816 1431 aaPredicted RBP21.67■■□□□ 1.06
TPM2-204ENST00000378300 NCOA2Q15596 1464 aa21.66■■□□□ 1.06
TPM2-204ENST00000378300 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
TPM2-204ENST00000378300 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
TPM2-204ENST00000378300 KIF14Q15058 1648 aa21.63■■□□□ 1.05
TPM2-204ENST00000378300 NPM1P06748 294 aaKnown RBP eCLIP21.56■■□□□ 1.04
TPM2-204ENST00000378300 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
TPM2-204ENST00000378300 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
TPM2-204ENST00000378300 MYOM3Q5VTT5 1437 aa21.54■■□□□ 1.04
TPM2-204ENST00000378300 ASXL2Q76L83 1435 aa21.54■■□□□ 1.04
TPM2-204ENST00000378300 ABCC10Q5T3U5 1492 aa21.52■■□□□ 1.04
TPM2-204ENST00000378300 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.04
TPM2-204ENST00000378300 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
TPM2-204ENST00000378300 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
TPM2-204ENST00000378300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.49■■□□□ 1.03
TPM2-204ENST00000378300 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
TPM2-204ENST00000378300 GPATCH8Q9UKJ3 1502 aaKnown RBP21.48■■□□□ 1.03
TPM2-204ENST00000378300 TTC37Q6PGP7 1564 aa21.47■■□□□ 1.03
TPM2-204ENST00000378300 FAM50AQ14320 339 aaKnown RBP21.46■■□□□ 1.03
TPM2-204ENST00000378300 CDC42BPAQ5VT25 1732 aa21.45■■□□□ 1.02
TPM2-204ENST00000378300 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
TPM2-204ENST00000378300 MAPKBP1O60336 1514 aa21.42■■□□□ 1.02
TPM2-204ENST00000378300 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
TPM2-204ENST00000378300 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
TPM2-204ENST00000378300 ZNF644Q9H582 1327 aaPredicted RBP21.41■■□□□ 1.02
TPM2-204ENST00000378300 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
TPM2-204ENST00000378300 HRCP23327 699 aa21.4■■□□□ 1.02
TPM2-204ENST00000378300 ITGAEP38570 1179 aa21.4■■□□□ 1.02
TPM2-204ENST00000378300 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
TPM2-204ENST00000378300 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
TPM2-204ENST00000378300 PREX2Q70Z35 1606 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms