RNA–Protein interactions for RNA: ENST00000377890.6

SLC3A2-203, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-203ENST00000377890 WDR62O43379 1518 aa25.01■■□□□ 1.59
SLC3A2-203ENST00000377890 CTTNBP2Q8WZ74 1663 aa24.97■■□□□ 1.59
SLC3A2-203ENST00000377890 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.582e-7■■■■■ 28.2
SLC3A2-203ENST00000377890 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
SLC3A2-203ENST00000377890 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
SLC3A2-203ENST00000377890 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
SLC3A2-203ENST00000377890 TIAM1Q13009 1591 aa24.9■■□□□ 1.58
SLC3A2-203ENST00000377890 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
SLC3A2-203ENST00000377890 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
SLC3A2-203ENST00000377890 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
SLC3A2-203ENST00000377890 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
SLC3A2-203ENST00000377890 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
SLC3A2-203ENST00000377890 P3H3Q8IVL6 736 aa24.86■■□□□ 1.57
SLC3A2-203ENST00000377890 DHX57Q6P158 1386 aaKnown RBP24.86■■□□□ 1.57
SLC3A2-203ENST00000377890 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
SLC3A2-203ENST00000377890 EFCAB5A4FU69 1503 aa24.85■■□□□ 1.57
SLC3A2-203ENST00000377890 CLSPNQ9HAW4 1339 aa24.85■■□□□ 1.57
SLC3A2-203ENST00000377890 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
SLC3A2-203ENST00000377890 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
SLC3A2-203ENST00000377890 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
SLC3A2-203ENST00000377890 GRIN2BQ13224 1484 aa24.8■■□□□ 1.56
SLC3A2-203ENST00000377890 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
SLC3A2-203ENST00000377890 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
SLC3A2-203ENST00000377890 CFAP43Q8NDM7 1665 aa24.77■■□□□ 1.56
SLC3A2-203ENST00000377890 SAMD9Q5K651 1589 aa24.76■■□□□ 1.55
SLC3A2-203ENST00000377890 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
SLC3A2-203ENST00000377890 FYCO1Q9BQS8 1478 aa24.69■■□□□ 1.54
SLC3A2-203ENST00000377890 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
SLC3A2-203ENST00000377890 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
SLC3A2-203ENST00000377890 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
SLC3A2-203ENST00000377890 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
SLC3A2-203ENST00000377890 FMN1Q68DA7 1419 aa24.64■■□□□ 1.54
SLC3A2-203ENST00000377890 NEUROD1Q13562 356 aa24.64■■□□□ 1.53
SLC3A2-203ENST00000377890 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
SLC3A2-203ENST00000377890 ITGAEP38570 1179 aa24.61■■□□□ 1.53
SLC3A2-203ENST00000377890 ATP1B4Q9UN42 357 aaPredicted RBP24.59■■□□□ 1.53
SLC3A2-203ENST00000377890 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
SLC3A2-203ENST00000377890 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
SLC3A2-203ENST00000377890 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
SLC3A2-203ENST00000377890 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
SLC3A2-203ENST00000377890 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
SLC3A2-203ENST00000377890 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
SLC3A2-203ENST00000377890 MIER1Q8N108 512 aa24.51■■□□□ 1.51
SLC3A2-203ENST00000377890 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
SLC3A2-203ENST00000377890 UGGT2Q9NYU1 1516 aa24.51■■□□□ 1.51
SLC3A2-203ENST00000377890 KIAA0586Q9BVV6 1533 aa24.49■■□□□ 1.51
SLC3A2-203ENST00000377890 FAM50AQ14320 339 aaKnown RBP24.47■■□□□ 1.51
SLC3A2-203ENST00000377890 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
SLC3A2-203ENST00000377890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
SLC3A2-203ENST00000377890 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
SLC3A2-203ENST00000377890 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
SLC3A2-203ENST00000377890 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.5
SLC3A2-203ENST00000377890 KIAA0556O60303 1618 aa24.39■■□□□ 1.5
SLC3A2-203ENST00000377890 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
SLC3A2-203ENST00000377890 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
SLC3A2-203ENST00000377890 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
SLC3A2-203ENST00000377890 FBLN2P98095 1184 aa24.35■■□□□ 1.49
SLC3A2-203ENST00000377890 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
SLC3A2-203ENST00000377890 NUP160Q12769 1436 aa24.34■■□□□ 1.49
SLC3A2-203ENST00000377890 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.48
SLC3A2-203ENST00000377890 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
SLC3A2-203ENST00000377890 YTHDC1Q96MU7 727 aaKnown RBP24.31■■□□□ 1.48
SLC3A2-203ENST00000377890 EPRSP07814 1512 aaKnown RBP24.31■■□□□ 1.48
SLC3A2-203ENST00000377890 EHBP1L1Q8N3D4 1523 aa24.29■■□□□ 1.48
SLC3A2-203ENST00000377890 CDK13Q14004 1512 aaKnown RBP24.29■■□□□ 1.48
SLC3A2-203ENST00000377890 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
SLC3A2-203ENST00000377890 SUPT6HQ7KZ85 1726 aaKnown RBP24.26■■□□□ 1.47
SLC3A2-203ENST00000377890 MYOM3Q5VTT5 1437 aa24.25■■□□□ 1.47
SLC3A2-203ENST00000377890 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
SLC3A2-203ENST00000377890 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
SLC3A2-203ENST00000377890 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
SLC3A2-203ENST00000377890 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
SLC3A2-203ENST00000377890 SIN3AQ96ST3 1273 aa24.2■■□□□ 1.47
SLC3A2-203ENST00000377890 HFM1A2PYH4 1435 aa24.2■■□□□ 1.46
SLC3A2-203ENST00000377890 RAPGEF6Q8TEU7 1601 aa24.19■■□□□ 1.46
SLC3A2-203ENST00000377890 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
SLC3A2-203ENST00000377890 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
SLC3A2-203ENST00000377890 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
SLC3A2-203ENST00000377890 PLB1Q6P1J6 1458 aa24.14■■□□□ 1.45
SLC3A2-203ENST00000377890 CHD1O14646 1710 aa24.12■■□□□ 1.45
SLC3A2-203ENST00000377890 NAIPQ13075 1403 aa24.11■■□□□ 1.45
SLC3A2-203ENST00000377890 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
SLC3A2-203ENST00000377890 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
SLC3A2-203ENST00000377890 TCOF1Q13428 1488 aaKnown RBP24.1■■□□□ 1.45
SLC3A2-203ENST00000377890 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
SLC3A2-203ENST00000377890 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
SLC3A2-203ENST00000377890 ABCA8O94911 1581 aa24■■□□□ 1.43
SLC3A2-203ENST00000377890 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
SLC3A2-203ENST00000377890 MIA2Q96PC5 1412 aa24■■□□□ 1.43
SLC3A2-203ENST00000377890 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
SLC3A2-203ENST00000377890 AKNAQ7Z591 1439 aa23.97■■□□□ 1.43
SLC3A2-203ENST00000377890 TROQ12816 1431 aaPredicted RBP23.95■■□□□ 1.42
SLC3A2-203ENST00000377890 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
SLC3A2-203ENST00000377890 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
SLC3A2-203ENST00000377890 CDK11AQ9UQ88 783 aaPredicted RBP23.92■■□□□ 1.42
SLC3A2-203ENST00000377890 KIF14Q15058 1648 aa23.91■■□□□ 1.42
SLC3A2-203ENST00000377890 RRP7BPQ9NSQ0 103 aa23.9■■□□□ 1.42
SLC3A2-203ENST00000377890 ATP10BO94823 1461 aa23.89■■□□□ 1.42
SLC3A2-203ENST00000377890 ADCY10Q96PN6 1610 aa23.89■■□□□ 1.41
SLC3A2-203ENST00000377890 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms