RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
POLR1E-202ENST00000377798 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
POLR1E-202ENST00000377798 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
POLR1E-202ENST00000377798 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
POLR1E-202ENST00000377798 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
POLR1E-202ENST00000377798 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
POLR1E-202ENST00000377798 SAMD9Q5K651 1589 aa23.14■■□□□ 1.29
POLR1E-202ENST00000377798 KIAA0586Q9BVV6 1533 aa23.1■■□□□ 1.29
POLR1E-202ENST00000377798 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
POLR1E-202ENST00000377798 FBLN2P98095 1184 aa23.07■■□□□ 1.28
POLR1E-202ENST00000377798 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
POLR1E-202ENST00000377798 TRIM26Q12899 539 aaPredicted RBP23.07■■□□□ 1.28
POLR1E-202ENST00000377798 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
POLR1E-202ENST00000377798 NUP160Q12769 1436 aa23.06■■□□□ 1.28
POLR1E-202ENST00000377798 UGGT2Q9NYU1 1516 aa23.05■■□□□ 1.28
POLR1E-202ENST00000377798 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
POLR1E-202ENST00000377798 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
POLR1E-202ENST00000377798 CHD1O14646 1710 aa23.02■■□□□ 1.28
POLR1E-202ENST00000377798 APLP2Q06481 763 aa23.02■■□□□ 1.28
POLR1E-202ENST00000377798 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
POLR1E-202ENST00000377798 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
POLR1E-202ENST00000377798 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
POLR1E-202ENST00000377798 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
POLR1E-202ENST00000377798 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
POLR1E-202ENST00000377798 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
POLR1E-202ENST00000377798 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
POLR1E-202ENST00000377798 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
POLR1E-202ENST00000377798 TIAM1Q13009 1591 aa22.89■■□□□ 1.25
POLR1E-202ENST00000377798 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
POLR1E-202ENST00000377798 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
POLR1E-202ENST00000377798 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
POLR1E-202ENST00000377798 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
POLR1E-202ENST00000377798 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
POLR1E-202ENST00000377798 LRRIQ1Q96JM4 1722 aa22.78■■□□□ 1.24
POLR1E-202ENST00000377798 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
POLR1E-202ENST00000377798 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
POLR1E-202ENST00000377798 LRRC9Q6ZRR7 1453 aa22.77■■□□□ 1.23
POLR1E-202ENST00000377798 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
POLR1E-202ENST00000377798 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
POLR1E-202ENST00000377798 CCDC18Q5T9S5 1454 aa22.72■■□□□ 1.23
POLR1E-202ENST00000377798 RAPGEF6Q8TEU7 1601 aa22.7■■□□□ 1.22
POLR1E-202ENST00000377798 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
POLR1E-202ENST00000377798 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
POLR1E-202ENST00000377798 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
POLR1E-202ENST00000377798 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
POLR1E-202ENST00000377798 CDK13Q14004 1512 aaKnown RBP22.6■■□□□ 1.21
POLR1E-202ENST00000377798 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
POLR1E-202ENST00000377798 ABCA8O94911 1581 aa22.6■■□□□ 1.21
POLR1E-202ENST00000377798 RRBP1Q9P2E9 1410 aaKnown RBP22.58■■□□□ 1.21
POLR1E-202ENST00000377798 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.21
POLR1E-202ENST00000377798 PTPRGP23470 1445 aa22.57■■□□□ 1.2
POLR1E-202ENST00000377798 MAGI3Q5TCQ9 1506 aa22.56■■□□□ 1.2
POLR1E-202ENST00000377798 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
POLR1E-202ENST00000377798 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
POLR1E-202ENST00000377798 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
POLR1E-202ENST00000377798 ARID3CA6NKF2 412 aa22.5■■□□□ 1.19
POLR1E-202ENST00000377798 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
POLR1E-202ENST00000377798 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
POLR1E-202ENST00000377798 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
POLR1E-202ENST00000377798 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
POLR1E-202ENST00000377798 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
POLR1E-202ENST00000377798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
POLR1E-202ENST00000377798 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
POLR1E-202ENST00000377798 ATP10BO94823 1461 aa22.42■■□□□ 1.18
POLR1E-202ENST00000377798 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
POLR1E-202ENST00000377798 TROQ12816 1431 aaPredicted RBP22.4■■□□□ 1.18
POLR1E-202ENST00000377798 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
POLR1E-202ENST00000377798 FGD6Q6ZV73 1430 aa22.4■■□□□ 1.18
POLR1E-202ENST00000377798 ADCY10Q96PN6 1610 aa22.37■■□□□ 1.17
POLR1E-202ENST00000377798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
POLR1E-202ENST00000377798 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
POLR1E-202ENST00000377798 HRCP23327 699 aa22.32■■□□□ 1.16
POLR1E-202ENST00000377798 FAM50AQ14320 339 aaKnown RBP22.31■■□□□ 1.16
POLR1E-202ENST00000377798 KIF14Q15058 1648 aa22.31■■□□□ 1.16
POLR1E-202ENST00000377798 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
POLR1E-202ENST00000377798 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
POLR1E-202ENST00000377798 MIA2Q96PC5 1412 aa22.29■■□□□ 1.16
POLR1E-202ENST00000377798 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
POLR1E-202ENST00000377798 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
POLR1E-202ENST00000377798 TCOF1Q13428 1488 aaKnown RBP22.26■■□□□ 1.15
POLR1E-202ENST00000377798 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
POLR1E-202ENST00000377798 ITGAEP38570 1179 aa22.25■■□□□ 1.15
POLR1E-202ENST00000377798 ABCC10Q5T3U5 1492 aa22.21■■□□□ 1.15
POLR1E-202ENST00000377798 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
POLR1E-202ENST00000377798 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
POLR1E-202ENST00000377798 CCER1Q8TC90 406 aaPredicted RBP22.15■■□□□ 1.14
POLR1E-202ENST00000377798 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
POLR1E-202ENST00000377798 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
POLR1E-202ENST00000377798 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
POLR1E-202ENST00000377798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.131e-9■■■■□ 19.9
POLR1E-202ENST00000377798 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
POLR1E-202ENST00000377798 TTC37Q6PGP7 1564 aa22.1■■□□□ 1.13
POLR1E-202ENST00000377798 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
POLR1E-202ENST00000377798 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
POLR1E-202ENST00000377798 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
POLR1E-202ENST00000377798 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
POLR1E-202ENST00000377798 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
POLR1E-202ENST00000377798 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
POLR1E-202ENST00000377798 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
POLR1E-202ENST00000377798 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms