RNA–Protein interactions for RNA: ENST00000377534.7

LMO7-205, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMO7, Length 4,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-205ENST00000377534 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
LMO7-205ENST00000377534 TDRD9Q8NDG6 1382 aaKnown RBP11.1□□□□□ -0.63
LMO7-205ENST00000377534 ABCA10Q8WWZ4 1543 aa11.1□□□□□ -0.63
LMO7-205ENST00000377534 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
LMO7-205ENST00000377534 URB2Q14146 1524 aaKnown RBP11.08□□□□□ -0.64
LMO7-205ENST00000377534 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
LMO7-205ENST00000377534 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
LMO7-205ENST00000377534 ARHGAP35Q9NRY4 1499 aa11.05□□□□□ -0.64
LMO7-205ENST00000377534 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
LMO7-205ENST00000377534 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
LMO7-205ENST00000377534 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
LMO7-205ENST00000377534 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
LMO7-205ENST00000377534 ITGAEP38570 1179 aa11.03□□□□□ -0.64
LMO7-205ENST00000377534 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.64
LMO7-205ENST00000377534 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.64
LMO7-205ENST00000377534 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
LMO7-205ENST00000377534 PLEKHD1A6NEE1 506 aa11.01□□□□□ -0.65
LMO7-205ENST00000377534 CUL7Q14999 1698 aa11.01□□□□□ -0.65
LMO7-205ENST00000377534 KCNH8Q96L42 1107 aa11□□□□□ -0.65
LMO7-205ENST00000377534 PLPPR3Q6T4P5 718 aa10.99□□□□□ -0.65
LMO7-205ENST00000377534 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
LMO7-205ENST00000377534 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
LMO7-205ENST00000377534 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
LMO7-205ENST00000377534 ZNF777Q9ULD5 760 aaPredicted RBP10.96□□□□□ -0.65
LMO7-205ENST00000377534 BCANQ96GW7 911 aa10.96□□□□□ -0.66
LMO7-205ENST00000377534 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.664e-8■□□□□ 9.8
LMO7-205ENST00000377534 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
LMO7-205ENST00000377534 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
LMO7-205ENST00000377534 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
LMO7-205ENST00000377534 STAG3Q9UJ98 1225 aa10.92□□□□□ -0.66
LMO7-205ENST00000377534 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
LMO7-205ENST00000377534 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
LMO7-205ENST00000377534 WDR97A6NE52 1622 aa10.9□□□□□ -0.66
LMO7-205ENST00000377534 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
LMO7-205ENST00000377534 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
LMO7-205ENST00000377534 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
LMO7-205ENST00000377534 LRRC9Q6ZRR7 1453 aa10.88□□□□□ -0.67
LMO7-205ENST00000377534 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
LMO7-205ENST00000377534 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
LMO7-205ENST00000377534 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
LMO7-205ENST00000377534 FYCO1Q9BQS8 1478 aa10.88□□□□□ -0.67
LMO7-205ENST00000377534 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
LMO7-205ENST00000377534 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
LMO7-205ENST00000377534 RRBP1Q9P2E9 1410 aaKnown RBP10.87□□□□□ -0.67
LMO7-205ENST00000377534 MAP3K1Q13233 1512 aa10.87□□□□□ -0.67
LMO7-205ENST00000377534 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
LMO7-205ENST00000377534 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
LMO7-205ENST00000377534 WDR62O43379 1518 aa10.85□□□□□ -0.67
LMO7-205ENST00000377534 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
LMO7-205ENST00000377534 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
LMO7-205ENST00000377534 SNAPC4Q5SXM2 1469 aa10.82□□□□□ -0.68
LMO7-205ENST00000377534 DIEXFQ68CQ4 756 aaKnown RBP10.82□□□□□ -0.68
LMO7-205ENST00000377534 PHLDB1Q86UU1 1377 aa10.82□□□□□ -0.68
LMO7-205ENST00000377534 ADAMTS12P58397 1594 aa10.81□□□□□ -0.68
LMO7-205ENST00000377534 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
LMO7-205ENST00000377534 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
LMO7-205ENST00000377534 CLSPNQ9HAW4 1339 aa10.8□□□□□ -0.68
LMO7-205ENST00000377534 FAM69CQ0P6D2 419 aa10.8□□□□□ -0.68
LMO7-205ENST00000377534 PTPRGP23470 1445 aa10.8□□□□□ -0.68
LMO7-205ENST00000377534 CFAP43Q8NDM7 1665 aa10.79□□□□□ -0.68
LMO7-205ENST00000377534 TRIM52Q96A61 297 aa10.78□□□□□ -0.68
LMO7-205ENST00000377534 DHX57Q6P158 1386 aaKnown RBP10.77□□□□□ -0.69
LMO7-205ENST00000377534 SETD5Q9C0A6 1442 aa10.77□□□□□ -0.69
LMO7-205ENST00000377534 SAMD9Q5K651 1589 aa10.77□□□□□ -0.69
LMO7-205ENST00000377534 RAB3GAP2Q9H2M9 1393 aa10.76□□□□□ -0.69
LMO7-205ENST00000377534 CCDC18Q5T9S5 1454 aa10.76□□□□□ -0.69
LMO7-205ENST00000377534 EIF4G3O43432 1585 aaKnown RBP10.76□□□□□ -0.69
LMO7-205ENST00000377534 GRIN2AQ12879 1464 aa10.75□□□□□ -0.69
LMO7-205ENST00000377534 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
LMO7-205ENST00000377534 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
LMO7-205ENST00000377534 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
LMO7-205ENST00000377534 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
LMO7-205ENST00000377534 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
LMO7-205ENST00000377534 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
LMO7-205ENST00000377534 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
LMO7-205ENST00000377534 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
LMO7-205ENST00000377534 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
LMO7-205ENST00000377534 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
LMO7-205ENST00000377534 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
LMO7-205ENST00000377534 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.7
LMO7-205ENST00000377534 MYOM3Q5VTT5 1437 aa10.71□□□□□ -0.7
LMO7-205ENST00000377534 CFDP1Q9UEE9 299 aaPredicted RBP10.7□□□□□ -0.7
LMO7-205ENST00000377534 CHIC2Q9UKJ5 165 aa10.7□□□□□ -0.7
LMO7-205ENST00000377534 UGGT2Q9NYU1 1516 aa10.7□□□□□ -0.7
LMO7-205ENST00000377534 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
LMO7-205ENST00000377534 MLECQ14165 292 aa10.69□□□□□ -0.7
LMO7-205ENST00000377534 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
LMO7-205ENST00000377534 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
LMO7-205ENST00000377534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
LMO7-205ENST00000377534 CDK13Q14004 1512 aaKnown RBP10.67□□□□□ -0.7
LMO7-205ENST00000377534 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
LMO7-205ENST00000377534 HDGFP51858 240 aaKnown RBP10.66□□□□□ -0.7
LMO7-205ENST00000377534 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
LMO7-205ENST00000377534 C14orf37Q86TY3 774 aa10.66□□□□□ -0.7
LMO7-205ENST00000377534 CENPBP07199 599 aaPredicted RBP10.65□□□□□ -0.7
LMO7-205ENST00000377534 PRG4Q92954 1404 aaPredicted RBP10.65□□□□□ -0.7
LMO7-205ENST00000377534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■□□□ 12.5
LMO7-205ENST00000377534 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
LMO7-205ENST00000377534 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
LMO7-205ENST00000377534 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms