RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
UBA1-202ENST00000377269 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
UBA1-202ENST00000377269 FBLN2P98095 1184 aa22.64■■□□□ 1.21
UBA1-202ENST00000377269 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
UBA1-202ENST00000377269 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
UBA1-202ENST00000377269 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
UBA1-202ENST00000377269 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
UBA1-202ENST00000377269 CLIP1P30622 1438 aa22.53■■□□□ 1.2
UBA1-202ENST00000377269 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
UBA1-202ENST00000377269 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
UBA1-202ENST00000377269 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
UBA1-202ENST00000377269 ARHGAP35Q9NRY4 1499 aa22.39■■□□□ 1.18
UBA1-202ENST00000377269 CTTNBP2Q8WZ74 1663 aa22.38■■□□□ 1.17
UBA1-202ENST00000377269 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
UBA1-202ENST00000377269 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
UBA1-202ENST00000377269 NUP160Q12769 1436 aa22.35■■□□□ 1.17
UBA1-202ENST00000377269 NEUROD1Q13562 356 aa22.35■■□□□ 1.17
UBA1-202ENST00000377269 KIAA0586Q9BVV6 1533 aa22.34■■□□□ 1.17
UBA1-202ENST00000377269 CHD1O14646 1710 aa22.32■■□□□ 1.16
UBA1-202ENST00000377269 IQGAP2Q13576 1575 aa22.32■■□□□ 1.16
UBA1-202ENST00000377269 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
UBA1-202ENST00000377269 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
UBA1-202ENST00000377269 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
UBA1-202ENST00000377269 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
UBA1-202ENST00000377269 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
UBA1-202ENST00000377269 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
UBA1-202ENST00000377269 UGGT2Q9NYU1 1516 aa22.21■■□□□ 1.15
UBA1-202ENST00000377269 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
UBA1-202ENST00000377269 DISP1Q96F81 1524 aa22.18■■□□□ 1.14
UBA1-202ENST00000377269 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
UBA1-202ENST00000377269 ATP1B4Q9UN42 357 aaPredicted RBP22.14■■□□□ 1.13
UBA1-202ENST00000377269 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
UBA1-202ENST00000377269 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
UBA1-202ENST00000377269 KIAA0556O60303 1618 aa22.1■■□□□ 1.13
UBA1-202ENST00000377269 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
UBA1-202ENST00000377269 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
UBA1-202ENST00000377269 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
UBA1-202ENST00000377269 APLP2Q06481 763 aa22.05■■□□□ 1.12
UBA1-202ENST00000377269 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
UBA1-202ENST00000377269 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
UBA1-202ENST00000377269 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
UBA1-202ENST00000377269 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
UBA1-202ENST00000377269 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
UBA1-202ENST00000377269 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
UBA1-202ENST00000377269 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
UBA1-202ENST00000377269 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
UBA1-202ENST00000377269 PLB1Q6P1J6 1458 aa21.95■■□□□ 1.1
UBA1-202ENST00000377269 PTPRGP23470 1445 aa21.94■■□□□ 1.1
UBA1-202ENST00000377269 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
UBA1-202ENST00000377269 NUP153P49790 1475 aaKnown RBP21.86■■□□□ 1.09
UBA1-202ENST00000377269 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
UBA1-202ENST00000377269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
UBA1-202ENST00000377269 CDK13Q14004 1512 aaKnown RBP21.84■■□□□ 1.09
UBA1-202ENST00000377269 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
UBA1-202ENST00000377269 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
UBA1-202ENST00000377269 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.09
UBA1-202ENST00000377269 HNRNPUL2Q1KMD3 747 aaKnown RBP21.83■■□□□ 1.09
UBA1-202ENST00000377269 LRRC9Q6ZRR7 1453 aa21.82■■□□□ 1.08
UBA1-202ENST00000377269 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
UBA1-202ENST00000377269 HECW1Q76N89 1606 aa21.82■■□□□ 1.08
UBA1-202ENST00000377269 ABCA8O94911 1581 aa21.8■■□□□ 1.08
UBA1-202ENST00000377269 UACAQ9BZF9 1416 aa21.78■■□□□ 1.08
UBA1-202ENST00000377269 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
UBA1-202ENST00000377269 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
UBA1-202ENST00000377269 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
UBA1-202ENST00000377269 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
UBA1-202ENST00000377269 ATP10BO94823 1461 aa21.73■■□□□ 1.07
UBA1-202ENST00000377269 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
UBA1-202ENST00000377269 PHLDB1Q86UU1 1377 aa21.68■■□□□ 1.06
UBA1-202ENST00000377269 ABCC2Q92887 1545 aa21.68■■□□□ 1.06
UBA1-202ENST00000377269 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
UBA1-202ENST00000377269 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
UBA1-202ENST00000377269 PLEKHD1A6NEE1 506 aa21.63■■□□□ 1.05
UBA1-202ENST00000377269 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
UBA1-202ENST00000377269 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
UBA1-202ENST00000377269 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
UBA1-202ENST00000377269 ADCY10Q96PN6 1610 aa21.6■■□□□ 1.05
UBA1-202ENST00000377269 TROQ12816 1431 aaPredicted RBP21.59■■□□□ 1.05
UBA1-202ENST00000377269 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.05
UBA1-202ENST00000377269 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.05
UBA1-202ENST00000377269 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.05
UBA1-202ENST00000377269 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.05
UBA1-202ENST00000377269 KDM5BQ9UGL1 1544 aa21.57■■□□□ 1.04
UBA1-202ENST00000377269 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
UBA1-202ENST00000377269 KCNH8Q96L42 1107 aa21.53■■□□□ 1.04
UBA1-202ENST00000377269 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
UBA1-202ENST00000377269 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
UBA1-202ENST00000377269 ZCCHC11Q5TAX3 1644 aaKnown RBP21.52■■□□□ 1.04
UBA1-202ENST00000377269 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
UBA1-202ENST00000377269 KIF14Q15058 1648 aa21.51■■□□□ 1.03
UBA1-202ENST00000377269 ITGAEP38570 1179 aa21.5■■□□□ 1.03
UBA1-202ENST00000377269 MYOM3Q5VTT5 1437 aa21.49■■□□□ 1.03
UBA1-202ENST00000377269 FGD6Q6ZV73 1430 aa21.47■■□□□ 1.03
UBA1-202ENST00000377269 NPM1P06748 294 aaKnown RBP eCLIP21.47■■□□□ 1.03
UBA1-202ENST00000377269 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
UBA1-202ENST00000377269 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
UBA1-202ENST00000377269 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
UBA1-202ENST00000377269 ASXL2Q76L83 1435 aa21.42■■□□□ 1.02
UBA1-202ENST00000377269 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
UBA1-202ENST00000377269 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms