RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 SHROOM2Q13796 1616 aa30.52■■■□□ 2.48
IRF3-202ENST00000377135 CUL7Q14999 1698 aa30.46■■■□□ 2.47
IRF3-202ENST00000377135 KIAA0586Q9BVV6 1533 aa30.42■■■□□ 2.46
IRF3-202ENST00000377135 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
IRF3-202ENST00000377135 NPM1P06748 294 aaKnown RBP eCLIP30.25■■■□□ 2.43
IRF3-202ENST00000377135 RAPGEF2Q9Y4G8 1499 aa30.23■■■□□ 2.43
IRF3-202ENST00000377135 TTBK1Q5TCY1 1321 aaPredicted RBP30.19■■■□□ 2.42
IRF3-202ENST00000377135 CARMIL2Q6F5E8 1435 aa30.16■■■□□ 2.42
IRF3-202ENST00000377135 PTPRGP23470 1445 aa30.15■■■□□ 2.42
IRF3-202ENST00000377135 IQGAP2Q13576 1575 aa30.11■■■□□ 2.41
IRF3-202ENST00000377135 TNIKQ9UKE5 1360 aa30.09■■■□□ 2.41
IRF3-202ENST00000377135 CSRNP3Q8WYN3 585 aa30.02■■■□□ 2.4
IRF3-202ENST00000377135 FAM69CQ0P6D2 419 aa30.01■■■□□ 2.39
IRF3-202ENST00000377135 ADCY10Q96PN6 1610 aa30■■■□□ 2.39
IRF3-202ENST00000377135 PRXQ9BXM0 1461 aa29.99■■■□□ 2.39
IRF3-202ENST00000377135 DISP1Q96F81 1524 aa29.97■■■□□ 2.39
IRF3-202ENST00000377135 UGGT2Q9NYU1 1516 aa29.95■■■□□ 2.39
IRF3-202ENST00000377135 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
IRF3-202ENST00000377135 ABCC10Q5T3U5 1492 aa29.9■■■□□ 2.38
IRF3-202ENST00000377135 UACAQ9BZF9 1416 aa29.88■■■□□ 2.37
IRF3-202ENST00000377135 FAM9AQ8IZU1 332 aaPredicted RBP29.87■■■□□ 2.37
IRF3-202ENST00000377135 KIF13AQ9H1H9 1805 aa29.85■■■□□ 2.37
IRF3-202ENST00000377135 ABCC2Q92887 1545 aa29.83■■■□□ 2.37
IRF3-202ENST00000377135 UHRF1BP1LA0JNW5 1464 aa29.82■■■□□ 2.36
IRF3-202ENST00000377135 EEA1Q15075 1411 aa29.8■■■□□ 2.36
IRF3-202ENST00000377135 CTTNBP2Q8WZ74 1663 aa29.8■■■□□ 2.36
IRF3-202ENST00000377135 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
IRF3-202ENST00000377135 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
IRF3-202ENST00000377135 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
IRF3-202ENST00000377135 P3H3Q8IVL6 736 aa29.74■■■□□ 2.35
IRF3-202ENST00000377135 DIP2BQ9P265 1576 aa29.74■■■□□ 2.35
IRF3-202ENST00000377135 ASXL2Q76L83 1435 aa29.73■■■□□ 2.35
IRF3-202ENST00000377135 PLB1Q6P1J6 1458 aa29.71■■■□□ 2.35
IRF3-202ENST00000377135 KDM5BQ9UGL1 1544 aa29.68■■■□□ 2.34
IRF3-202ENST00000377135 RANGAP1P46060 587 aaPredicted RBP29.64■■■□□ 2.34
IRF3-202ENST00000377135 TSPOAP1O95153 1857 aa29.58■■■□□ 2.33
IRF3-202ENST00000377135 ZCCHC11Q5TAX3 1644 aaKnown RBP29.56■■■□□ 2.32
IRF3-202ENST00000377135 ABCA8O94911 1581 aa29.54■■■□□ 2.32
IRF3-202ENST00000377135 EHMT2Q96KQ7 1210 aa29.54■■■□□ 2.32
IRF3-202ENST00000377135 KCNH8Q96L42 1107 aa29.54■■■□□ 2.32
IRF3-202ENST00000377135 GLI2P10070 1586 aa29.53■■■□□ 2.32
IRF3-202ENST00000377135 EPRSP07814 1512 aaKnown RBP29.52■■■□□ 2.32
IRF3-202ENST00000377135 ARID3CA6NKF2 412 aa29.52■■■□□ 2.32
IRF3-202ENST00000377135 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
IRF3-202ENST00000377135 UBTFP17480 764 aaKnown RBP29.5■■■□□ 2.31
IRF3-202ENST00000377135 WDR7Q9Y4E6 1490 aa29.47■■■□□ 2.31
IRF3-202ENST00000377135 KIF21BO75037 1637 aa29.44■■■□□ 2.3
IRF3-202ENST00000377135 SAMD9Q5K651 1589 aa29.44■■■□□ 2.3
IRF3-202ENST00000377135 KDM6BO15054 1643 aa29.42■■■□□ 2.3
IRF3-202ENST00000377135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.4■■■□□ 2.3
IRF3-202ENST00000377135 HNRNPUL2Q1KMD3 747 aaKnown RBP29.4■■■□□ 2.3
IRF3-202ENST00000377135 ATP10BO94823 1461 aa29.4■■■□□ 2.3
IRF3-202ENST00000377135 FHOD3Q2V2M9 1422 aa29.36■■■□□ 2.29
IRF3-202ENST00000377135 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
IRF3-202ENST00000377135 PPRC1Q5VV67 1664 aaKnown RBP29.33■■■□□ 2.29
IRF3-202ENST00000377135 CD109Q6YHK3 1445 aa29.33■■■□□ 2.29
IRF3-202ENST00000377135 TEX14Q8IWB6 1497 aa29.32■■■□□ 2.28
IRF3-202ENST00000377135 RAPGEF6Q8TEU7 1601 aa29.28■■■□□ 2.28
IRF3-202ENST00000377135 COL17A1Q9UMD9 1497 aaPredicted RBP29.26■■■□□ 2.27
IRF3-202ENST00000377135 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
IRF3-202ENST00000377135 PLEKHD1A6NEE1 506 aa29.23■■■□□ 2.27
IRF3-202ENST00000377135 NUP153P49790 1475 aaKnown RBP29.22■■■□□ 2.27
IRF3-202ENST00000377135 MAGI3Q5TCQ9 1506 aa29.21■■■□□ 2.27
IRF3-202ENST00000377135 ATP1B4Q9UN42 357 aaPredicted RBP29.19■■■□□ 2.26
IRF3-202ENST00000377135 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
IRF3-202ENST00000377135 KDM4FA0A1W2PPD8 638 aa29.14■■■□□ 2.26
IRF3-202ENST00000377135 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
IRF3-202ENST00000377135 FMN1Q68DA7 1419 aa29.08■■■□□ 2.25
IRF3-202ENST00000377135 ABCA9Q8IUA7 1624 aa29.05■■■□□ 2.24
IRF3-202ENST00000377135 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
IRF3-202ENST00000377135 CDK11AQ9UQ88 783 aaPredicted RBP28.99■■■□□ 2.23
IRF3-202ENST00000377135 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
IRF3-202ENST00000377135 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
IRF3-202ENST00000377135 RAPGEF3O95398 923 aa28.96■■■□□ 2.23
IRF3-202ENST00000377135 NEO1Q92859 1461 aa28.93■■■□□ 2.22
IRF3-202ENST00000377135 HECW1Q76N89 1606 aa28.88■■■□□ 2.21
IRF3-202ENST00000377135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.88■■■□□ 2.213e-7■□□□□ 11.1
IRF3-202ENST00000377135 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
IRF3-202ENST00000377135 CLIP1P30622 1438 aa28.83■■■□□ 2.21
IRF3-202ENST00000377135 AKNAQ7Z591 1439 aa28.83■■■□□ 2.21
IRF3-202ENST00000377135 FANCAO15360 1455 aa28.82■■■□□ 2.2
IRF3-202ENST00000377135 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
IRF3-202ENST00000377135 PLCH2O75038 1416 aa28.78■■■□□ 2.2
IRF3-202ENST00000377135 TTC37Q6PGP7 1564 aa28.78■■■□□ 2.2
IRF3-202ENST00000377135 EFCAB2Q5VUJ9 269 aa28.77■■■□□ 2.2
IRF3-202ENST00000377135 TROQ12816 1431 aaPredicted RBP28.76■■■□□ 2.2
IRF3-202ENST00000377135 DENND4BO75064 1496 aaPredicted RBP28.76■■■□□ 2.2
IRF3-202ENST00000377135 ARID4BQ4LE39 1312 aaPredicted RBP28.7■■■□□ 2.18
IRF3-202ENST00000377135 CFAP74Q9C0B2 1584 aa28.69■■■□□ 2.18
IRF3-202ENST00000377135 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
IRF3-202ENST00000377135 SCAPERQ9BY12 1400 aa28.68■■■□□ 2.18
IRF3-202ENST00000377135 LRRIQ1Q96JM4 1722 aa28.67■■■□□ 2.18
IRF3-202ENST00000377135 PCF11O94913 1555 aaKnown RBP28.67■■■□□ 2.18
IRF3-202ENST00000377135 FRMPD1Q5SYB0 1578 aa28.65■■■□□ 2.18
IRF3-202ENST00000377135 KIF14Q15058 1648 aa28.64■■■□□ 2.18
IRF3-202ENST00000377135 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
IRF3-202ENST00000377135 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.18
IRF3-202ENST00000377135 RICTORQ6R327 1708 aa28.6■■■□□ 2.17
IRF3-202ENST00000377135 MYO5CQ9NQX4 1742 aa28.58■■■□□ 2.17
IRF3-202ENST00000377135 ARHGAP5Q13017 1502 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms