RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 KIAA0586Q9BVV6 1533 aa27.7■■■□□ 2.03
HLA-F-218ENST00000376861 CTTNBP2Q8WZ74 1663 aa27.66■■■□□ 2.02
HLA-F-218ENST00000376861 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
HLA-F-218ENST00000376861 JPH4Q96JJ6 628 aa27.65■■■□□ 2.02
HLA-F-218ENST00000376861 GOLGA3Q08378 1498 aa27.64■■■□□ 2.01
HLA-F-218ENST00000376861 IQGAP2Q13576 1575 aa27.63■■■□□ 2.01
HLA-F-218ENST00000376861 ARHGEF11O15085 1522 aa27.57■■■□□ 2
HLA-F-218ENST00000376861 SHROOM2Q13796 1616 aa27.56■■■□□ 2
HLA-F-218ENST00000376861 RIMBP3CA6NJZ7 1639 aa27.55■■■□□ 2
HLA-F-218ENST00000376861 RIMBP3BA6NNM3 1639 aa27.55■■■□□ 2
HLA-F-218ENST00000376861 RIMBP3Q9UFD9 1639 aa27.55■■■□□ 2
HLA-F-218ENST00000376861 PRG4Q92954 1404 aaPredicted RBP27.54■■■□□ 2
HLA-F-218ENST00000376861 CARMIL2Q6F5E8 1435 aa27.49■■□□□ 1.99
HLA-F-218ENST00000376861 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
HLA-F-218ENST00000376861 UGGT2Q9NYU1 1516 aa27.44■■□□□ 1.98
HLA-F-218ENST00000376861 ERCC6L2Q5T890 1561 aa27.42■■□□□ 1.98
HLA-F-218ENST00000376861 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
HLA-F-218ENST00000376861 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
HLA-F-218ENST00000376861 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
HLA-F-218ENST00000376861 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
HLA-F-218ENST00000376861 DISP1Q96F81 1524 aa27.33■■□□□ 1.97
HLA-F-218ENST00000376861 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
HLA-F-218ENST00000376861 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
HLA-F-218ENST00000376861 P3H3Q8IVL6 736 aa27.31■■□□□ 1.96
HLA-F-218ENST00000376861 PTPRGP23470 1445 aa27.28■■□□□ 1.96
HLA-F-218ENST00000376861 EFCAB5A4FU69 1503 aa27.25■■□□□ 1.95
HLA-F-218ENST00000376861 SAMD9Q5K651 1589 aa27.24■■□□□ 1.95
HLA-F-218ENST00000376861 CLIP1P30622 1438 aa27.15■■□□□ 1.94
HLA-F-218ENST00000376861 FHOD3Q2V2M9 1422 aa27.15■■□□□ 1.94
HLA-F-218ENST00000376861 ARHGAP35Q9NRY4 1499 aa27.12■■□□□ 1.93
HLA-F-218ENST00000376861 NPM1P06748 294 aaKnown RBP eCLIP27.11■■□□□ 1.93
HLA-F-218ENST00000376861 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
HLA-F-218ENST00000376861 UACAQ9BZF9 1416 aa27.09■■□□□ 1.93
HLA-F-218ENST00000376861 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
HLA-F-218ENST00000376861 PLB1Q6P1J6 1458 aa27.03■■□□□ 1.92
HLA-F-218ENST00000376861 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
HLA-F-218ENST00000376861 ABCC2Q92887 1545 aa27.01■■□□□ 1.91
HLA-F-218ENST00000376861 UHRF1BP1LA0JNW5 1464 aa26.99■■□□□ 1.91
HLA-F-218ENST00000376861 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
HLA-F-218ENST00000376861 ABCA8O94911 1581 aa26.98■■□□□ 1.91
HLA-F-218ENST00000376861 RAPGEF6Q8TEU7 1601 aa26.97■■□□□ 1.91
HLA-F-218ENST00000376861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.91■■□□□ 1.9
HLA-F-218ENST00000376861 HNRNPUL2Q1KMD3 747 aaKnown RBP26.91■■□□□ 1.9
HLA-F-218ENST00000376861 ARID3CA6NKF2 412 aa26.9■■□□□ 1.9
HLA-F-218ENST00000376861 ZCCHC11Q5TAX3 1644 aaKnown RBP26.86■■□□□ 1.89
HLA-F-218ENST00000376861 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
HLA-F-218ENST00000376861 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
HLA-F-218ENST00000376861 NUP153P49790 1475 aaKnown RBP26.82■■□□□ 1.88
HLA-F-218ENST00000376861 CASKIN1Q8WXD9 1431 aa26.8■■□□□ 1.88
HLA-F-218ENST00000376861 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
HLA-F-218ENST00000376861 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
HLA-F-218ENST00000376861 MAPKBP1O60336 1514 aa26.79■■□□□ 1.88
HLA-F-218ENST00000376861 ATP10BO94823 1461 aa26.78■■□□□ 1.88
HLA-F-218ENST00000376861 FYCO1Q9BQS8 1478 aa26.78■■□□□ 1.88
HLA-F-218ENST00000376861 ASXL2Q76L83 1435 aa26.75■■□□□ 1.87
HLA-F-218ENST00000376861 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
HLA-F-218ENST00000376861 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
HLA-F-218ENST00000376861 EPRSP07814 1512 aaKnown RBP26.72■■□□□ 1.87
HLA-F-218ENST00000376861 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
HLA-F-218ENST00000376861 CCDC18Q5T9S5 1454 aa26.71■■□□□ 1.87
HLA-F-218ENST00000376861 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
HLA-F-218ENST00000376861 WDR7Q9Y4E6 1490 aa26.67■■□□□ 1.86
HLA-F-218ENST00000376861 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
HLA-F-218ENST00000376861 APLP2Q06481 763 aa26.66■■□□□ 1.86
HLA-F-218ENST00000376861 LRRIQ1Q96JM4 1722 aa26.65■■□□□ 1.86
HLA-F-218ENST00000376861 FAM69CQ0P6D2 419 aa26.65■■□□□ 1.86
HLA-F-218ENST00000376861 ABCC10Q5T3U5 1492 aa26.62■■□□□ 1.85
HLA-F-218ENST00000376861 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
HLA-F-218ENST00000376861 KIF13AQ9H1H9 1805 aa26.56■■□□□ 1.84
HLA-F-218ENST00000376861 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
HLA-F-218ENST00000376861 TROQ12816 1431 aaPredicted RBP26.51■■□□□ 1.83
HLA-F-218ENST00000376861 GLI2P10070 1586 aa26.5■■□□□ 1.83
HLA-F-218ENST00000376861 CFAP43Q8NDM7 1665 aa26.49■■□□□ 1.83
HLA-F-218ENST00000376861 TIAM1Q13009 1591 aa26.48■■□□□ 1.83
HLA-F-218ENST00000376861 KIF14Q15058 1648 aa26.48■■□□□ 1.83
HLA-F-218ENST00000376861 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
HLA-F-218ENST00000376861 MAP3K1Q13233 1512 aa26.44■■□□□ 1.82
HLA-F-218ENST00000376861 CD109Q6YHK3 1445 aa26.43■■□□□ 1.82
HLA-F-218ENST00000376861 ABCA9Q8IUA7 1624 aa26.42■■□□□ 1.82
HLA-F-218ENST00000376861 MAP3K4Q9Y6R4 1608 aa26.42■■□□□ 1.82
HLA-F-218ENST00000376861 MAGI3Q5TCQ9 1506 aa26.42■■□□□ 1.82
HLA-F-218ENST00000376861 EHBP1L1Q8N3D4 1523 aa26.42■■□□□ 1.82
HLA-F-218ENST00000376861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.39■■□□□ 1.81
HLA-F-218ENST00000376861 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
HLA-F-218ENST00000376861 TEX14Q8IWB6 1497 aa26.35■■□□□ 1.81
HLA-F-218ENST00000376861 TTC37Q6PGP7 1564 aa26.34■■□□□ 1.81
HLA-F-218ENST00000376861 SUPT6HQ7KZ85 1726 aaKnown RBP26.33■■□□□ 1.81
HLA-F-218ENST00000376861 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
HLA-F-218ENST00000376861 MYO5CQ9NQX4 1742 aa26.32■■□□□ 1.8
HLA-F-218ENST00000376861 CCNB3Q8WWL7 1395 aa26.28■■□□□ 1.8
HLA-F-218ENST00000376861 PPRC1Q5VV67 1664 aaKnown RBP26.26■■□□□ 1.79
HLA-F-218ENST00000376861 PLCH2O75038 1416 aa26.25■■□□□ 1.79
HLA-F-218ENST00000376861 NCOA2Q15596 1464 aa26.24■■□□□ 1.79
HLA-F-218ENST00000376861 ARHGAP5Q13017 1502 aa26.24■■□□□ 1.79
HLA-F-218ENST00000376861 CFAP74Q9C0B2 1584 aa26.23■■□□□ 1.79
HLA-F-218ENST00000376861 EFCAB2Q5VUJ9 269 aa26.23■■□□□ 1.79
HLA-F-218ENST00000376861 FANCAO15360 1455 aa26.22■■□□□ 1.79
HLA-F-218ENST00000376861 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
HLA-F-218ENST00000376861 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
HLA-F-218ENST00000376861 PREX2Q70Z35 1606 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms