RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
HLA-A-203ENST00000376809 NUP160Q12769 1436 aa28.95■■■□□ 2.23
HLA-A-203ENST00000376809 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
HLA-A-203ENST00000376809 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
HLA-A-203ENST00000376809 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
HLA-A-203ENST00000376809 IQGAP2Q13576 1575 aa28.84■■■□□ 2.21
HLA-A-203ENST00000376809 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
HLA-A-203ENST00000376809 RANGAP1P46060 587 aaPredicted RBP28.79■■■□□ 2.2
HLA-A-203ENST00000376809 CEP162Q5TB80 1403 aa28.7■■■□□ 2.18
HLA-A-203ENST00000376809 JPH4Q96JJ6 628 aa28.68■■■□□ 2.18
HLA-A-203ENST00000376809 SHROOM2Q13796 1616 aa28.68■■■□□ 2.18
HLA-A-203ENST00000376809 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
HLA-A-203ENST00000376809 CLIP1P30622 1438 aa28.65■■■□□ 2.18
HLA-A-203ENST00000376809 SAMD9Q5K651 1589 aa28.6■■■□□ 2.17
HLA-A-203ENST00000376809 EFCAB5A4FU69 1503 aa28.59■■■□□ 2.17
HLA-A-203ENST00000376809 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
HLA-A-203ENST00000376809 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
HLA-A-203ENST00000376809 DISP1Q96F81 1524 aa28.57■■■□□ 2.16
HLA-A-203ENST00000376809 KIAA0556O60303 1618 aa28.56■■■□□ 2.16
HLA-A-203ENST00000376809 P3H3Q8IVL6 736 aa28.56■■■□□ 2.16
HLA-A-203ENST00000376809 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
HLA-A-203ENST00000376809 CARMIL2Q6F5E8 1435 aa28.52■■■□□ 2.16
HLA-A-203ENST00000376809 FHOD3Q2V2M9 1422 aa28.5■■■□□ 2.15
HLA-A-203ENST00000376809 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
HLA-A-203ENST00000376809 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
HLA-A-203ENST00000376809 TTBK1Q5TCY1 1321 aaPredicted RBP28.42■■■□□ 2.14
HLA-A-203ENST00000376809 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
HLA-A-203ENST00000376809 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
HLA-A-203ENST00000376809 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
HLA-A-203ENST00000376809 PTPRGP23470 1445 aa28.32■■■□□ 2.12
HLA-A-203ENST00000376809 FMN1Q68DA7 1419 aa28.31■■■□□ 2.12
HLA-A-203ENST00000376809 VPS8Q8N3P4 1428 aa28.28■■■□□ 2.12
HLA-A-203ENST00000376809 PCF11O94913 1555 aaKnown RBP28.24■■■□□ 2.11
HLA-A-203ENST00000376809 PLB1Q6P1J6 1458 aa28.22■■■□□ 2.11
HLA-A-203ENST00000376809 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
HLA-A-203ENST00000376809 ABCA8O94911 1581 aa28.19■■■□□ 2.1
HLA-A-203ENST00000376809 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
HLA-A-203ENST00000376809 ATP1B4Q9UN42 357 aaPredicted RBP28.17■■■□□ 2.1
HLA-A-203ENST00000376809 CASKIN1Q8WXD9 1431 aa28.17■■■□□ 2.1
HLA-A-203ENST00000376809 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
HLA-A-203ENST00000376809 UACAQ9BZF9 1416 aa28.14■■■□□ 2.1
HLA-A-203ENST00000376809 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
HLA-A-203ENST00000376809 LRRIQ1Q96JM4 1722 aa28.11■■■□□ 2.09
HLA-A-203ENST00000376809 ABCC2Q92887 1545 aa28.1■■■□□ 2.09
HLA-A-203ENST00000376809 NUP153P49790 1475 aaKnown RBP28.09■■■□□ 2.09
HLA-A-203ENST00000376809 ADCY10Q96PN6 1610 aa28.08■■■□□ 2.09
HLA-A-203ENST00000376809 ARID3CA6NKF2 412 aa28.07■■■□□ 2.08
HLA-A-203ENST00000376809 UHRF1BP1LA0JNW5 1464 aa28.05■■■□□ 2.08
HLA-A-203ENST00000376809 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
HLA-A-203ENST00000376809 CDK13Q14004 1512 aaKnown RBP28.01■■■□□ 2.07
HLA-A-203ENST00000376809 CCDC18Q5T9S5 1454 aa27.98■■■□□ 2.07
HLA-A-203ENST00000376809 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
HLA-A-203ENST00000376809 APLP2Q06481 763 aa27.97■■■□□ 2.07
HLA-A-203ENST00000376809 ATP10BO94823 1461 aa27.96■■■□□ 2.07
HLA-A-203ENST00000376809 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
HLA-A-203ENST00000376809 TIAM1Q13009 1591 aa27.95■■■□□ 2.07
HLA-A-203ENST00000376809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.95■■■□□ 2.06
HLA-A-203ENST00000376809 HNRNPUL2Q1KMD3 747 aaKnown RBP27.95■■■□□ 2.06
HLA-A-203ENST00000376809 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
HLA-A-203ENST00000376809 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
HLA-A-203ENST00000376809 NPM1P06748 294 aaKnown RBP eCLIP27.89■■■□□ 2.06
HLA-A-203ENST00000376809 PPARGC1BQ86YN6 1023 aaKnown RBP27.83■■■□□ 2.05
HLA-A-203ENST00000376809 MAGI3Q5TCQ9 1506 aa27.83■■■□□ 2.05
HLA-A-203ENST00000376809 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
HLA-A-203ENST00000376809 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
HLA-A-203ENST00000376809 CDK11AQ9UQ88 783 aaPredicted RBP27.8■■■□□ 2.04
HLA-A-203ENST00000376809 MTUS2Q5JR59 1369 aa27.79■■■□□ 2.04
HLA-A-203ENST00000376809 PLEKHD1A6NEE1 506 aa27.78■■■□□ 2.04
HLA-A-203ENST00000376809 EHBP1L1Q8N3D4 1523 aa27.76■■■□□ 2.03
HLA-A-203ENST00000376809 TROQ12816 1431 aaPredicted RBP27.74■■■□□ 2.03
HLA-A-203ENST00000376809 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
HLA-A-203ENST00000376809 MAPKBP1O60336 1514 aa27.71■■■□□ 2.03
HLA-A-203ENST00000376809 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
HLA-A-203ENST00000376809 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
HLA-A-203ENST00000376809 KIF14Q15058 1648 aa27.68■■■□□ 2.02
HLA-A-203ENST00000376809 KCNH8Q96L42 1107 aa27.65■■■□□ 2.02
HLA-A-203ENST00000376809 NCOA2Q15596 1464 aa27.6■■■□□ 2.01
HLA-A-203ENST00000376809 TTC37Q6PGP7 1564 aa27.55■■■□□ 2
HLA-A-203ENST00000376809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.55■■■□□ 2
HLA-A-203ENST00000376809 ABCC10Q5T3U5 1492 aa27.54■■■□□ 2
HLA-A-203ENST00000376809 DIP2BQ9P265 1576 aa27.51■■□□□ 1.99
HLA-A-203ENST00000376809 PHLDB1Q86UU1 1377 aa27.51■■□□□ 1.99
HLA-A-203ENST00000376809 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
HLA-A-203ENST00000376809 CDC42BPAQ5VT25 1732 aa27.49■■□□□ 1.99
HLA-A-203ENST00000376809 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
HLA-A-203ENST00000376809 MYO5CQ9NQX4 1742 aa27.48■■□□□ 1.99
HLA-A-203ENST00000376809 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
HLA-A-203ENST00000376809 KIF13AQ9H1H9 1805 aa27.47■■□□□ 1.99
HLA-A-203ENST00000376809 ITSN2Q9NZM3 1697 aa27.47■■□□□ 1.99
HLA-A-203ENST00000376809 GLI2P10070 1586 aa27.45■■□□□ 1.98
HLA-A-203ENST00000376809 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
HLA-A-203ENST00000376809 GPATCH8Q9UKJ3 1502 aaKnown RBP27.44■■□□□ 1.98
HLA-A-203ENST00000376809 FAM69CQ0P6D2 419 aa27.44■■□□□ 1.98
HLA-A-203ENST00000376809 PREX2Q70Z35 1606 aa27.43■■□□□ 1.98
HLA-A-203ENST00000376809 CDC42BPBQ9Y5S2 1711 aa27.43■■□□□ 1.98
HLA-A-203ENST00000376809 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
HLA-A-203ENST00000376809 CD109Q6YHK3 1445 aa27.37■■□□□ 1.97
HLA-A-203ENST00000376809 TSPOAP1O95153 1857 aa27.37■■□□□ 1.97
HLA-A-203ENST00000376809 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
HLA-A-203ENST00000376809 PLCH2O75038 1416 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms