RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 CUL7Q14999 1698 aa32.21■■■□□ 2.75
HDAC6-202ENST00000376610 IGF1RP08069 1367 aa32.19■■■□□ 2.74
HDAC6-202ENST00000376610 KIAA0586Q9BVV6 1533 aa32.12■■■□□ 2.73
HDAC6-202ENST00000376610 NPM1P06748 294 aaKnown RBP eCLIP32.06■■■□□ 2.72
HDAC6-202ENST00000376610 CARMIL1Q5VZK9 1371 aa32.02■■■□□ 2.72
HDAC6-202ENST00000376610 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
HDAC6-202ENST00000376610 AEBP2Q6ZN18 517 aaPredicted RBP31.93■■■□□ 2.7
HDAC6-202ENST00000376610 ADCY10Q96PN6 1610 aa31.93■■■□□ 2.7
HDAC6-202ENST00000376610 MAPKBP1O60336 1514 aa31.92■■■□□ 2.7
HDAC6-202ENST00000376610 FAM69CQ0P6D2 419 aa31.88■■■□□ 2.69
HDAC6-202ENST00000376610 ABCC10Q5T3U5 1492 aa31.88■■■□□ 2.69
HDAC6-202ENST00000376610 CARMIL2Q6F5E8 1435 aa31.87■■■□□ 2.69
HDAC6-202ENST00000376610 PTPRGP23470 1445 aa31.84■■■□□ 2.69
HDAC6-202ENST00000376610 IQGAP2Q13576 1575 aa31.84■■■□□ 2.69
HDAC6-202ENST00000376610 DIP2BQ9P265 1576 aa31.8■■■□□ 2.68
HDAC6-202ENST00000376610 TTBK1Q5TCY1 1321 aaPredicted RBP31.79■■■□□ 2.68
HDAC6-202ENST00000376610 TNIKQ9UKE5 1360 aa31.79■■■□□ 2.68
HDAC6-202ENST00000376610 RAPGEF2Q9Y4G8 1499 aa31.74■■■□□ 2.67
HDAC6-202ENST00000376610 ABCC2Q92887 1545 aa31.66■■■□□ 2.66
HDAC6-202ENST00000376610 TSPOAP1O95153 1857 aa31.62■■■□□ 2.65
HDAC6-202ENST00000376610 DISP1Q96F81 1524 aa31.62■■■□□ 2.65
HDAC6-202ENST00000376610 UGGT2Q9NYU1 1516 aa31.6■■■□□ 2.65
HDAC6-202ENST00000376610 UHRF1BP1LA0JNW5 1464 aa31.59■■■□□ 2.65
HDAC6-202ENST00000376610 UACAQ9BZF9 1416 aa31.59■■■□□ 2.65
HDAC6-202ENST00000376610 PLB1Q6P1J6 1458 aa31.57■■■□□ 2.64
HDAC6-202ENST00000376610 KDM6BO15054 1643 aa31.57■■■□□ 2.64
HDAC6-202ENST00000376610 ASXL2Q76L83 1435 aa31.54■■■□□ 2.64
HDAC6-202ENST00000376610 KIAA0556O60303 1618 aa31.53■■■□□ 2.64
HDAC6-202ENST00000376610 CTTNBP2Q8WZ74 1663 aa31.51■■■□□ 2.63
HDAC6-202ENST00000376610 GLI2P10070 1586 aa31.46■■■□□ 2.63
HDAC6-202ENST00000376610 KDM5BQ9UGL1 1544 aa31.44■■■□□ 2.62
HDAC6-202ENST00000376610 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
HDAC6-202ENST00000376610 ZCCHC11Q5TAX3 1644 aaKnown RBP31.39■■■□□ 2.62
HDAC6-202ENST00000376610 PRXQ9BXM0 1461 aa31.37■■■□□ 2.61
HDAC6-202ENST00000376610 EPRSP07814 1512 aaKnown RBP31.34■■■□□ 2.61
HDAC6-202ENST00000376610 PPRC1Q5VV67 1664 aaKnown RBP31.33■■■□□ 2.61
HDAC6-202ENST00000376610 MAP3K4Q9Y6R4 1608 aa31.27■■■□□ 2.6
HDAC6-202ENST00000376610 FAM9AQ8IZU1 332 aaPredicted RBP31.27■■■□□ 2.6
HDAC6-202ENST00000376610 TEX14Q8IWB6 1497 aa31.27■■■□□ 2.6
HDAC6-202ENST00000376610 WDR7Q9Y4E6 1490 aa31.26■■■□□ 2.59
HDAC6-202ENST00000376610 ABCA8O94911 1581 aa31.22■■■□□ 2.59
HDAC6-202ENST00000376610 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
HDAC6-202ENST00000376610 KDM4FA0A1W2PPD8 638 aa31.16■■■□□ 2.58
HDAC6-202ENST00000376610 KCNH8Q96L42 1107 aa31.1■■■□□ 2.57
HDAC6-202ENST00000376610 CFAP43Q8NDM7 1665 aa31.09■■■□□ 2.57
HDAC6-202ENST00000376610 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
HDAC6-202ENST00000376610 P3H3Q8IVL6 736 aa31.08■■■□□ 2.57
HDAC6-202ENST00000376610 EEA1Q15075 1411 aa31.07■■■□□ 2.57
HDAC6-202ENST00000376610 CD109Q6YHK3 1445 aa31.07■■■□□ 2.56
HDAC6-202ENST00000376610 MAGI3Q5TCQ9 1506 aa31.03■■■□□ 2.56
HDAC6-202ENST00000376610 SAMD9Q5K651 1589 aa31.01■■■□□ 2.56
HDAC6-202ENST00000376610 ARID3CA6NKF2 412 aa30.99■■■□□ 2.55
HDAC6-202ENST00000376610 ADGRL1O94910 1474 aa30.97■■■□□ 2.55
HDAC6-202ENST00000376610 ATP10BO94823 1461 aa30.95■■■□□ 2.54
HDAC6-202ENST00000376610 RAPGEF6Q8TEU7 1601 aa30.92■■■□□ 2.54
HDAC6-202ENST00000376610 RANGAP1P46060 587 aaPredicted RBP30.89■■■□□ 2.54
HDAC6-202ENST00000376610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.88■■■□□ 2.53
HDAC6-202ENST00000376610 HNRNPUL2Q1KMD3 747 aaKnown RBP30.88■■■□□ 2.53
HDAC6-202ENST00000376610 ABCA9Q8IUA7 1624 aa30.83■■■□□ 2.53
HDAC6-202ENST00000376610 FHOD3Q2V2M9 1422 aa30.81■■■□□ 2.52
HDAC6-202ENST00000376610 KIF21BO75037 1637 aa30.8■■■□□ 2.52
HDAC6-202ENST00000376610 ARAP3Q8WWN8 1544 aa30.78■■■□□ 2.52
HDAC6-202ENST00000376610 PHLDB1Q86UU1 1377 aa30.78■■■□□ 2.52
HDAC6-202ENST00000376610 NUP153P49790 1475 aaKnown RBP30.76■■■□□ 2.52
HDAC6-202ENST00000376610 EFCAB5A4FU69 1503 aa30.76■■■□□ 2.51
HDAC6-202ENST00000376610 NEO1Q92859 1461 aa30.69■■■□□ 2.5
HDAC6-202ENST00000376610 PLEKHD1A6NEE1 506 aa30.68■■■□□ 2.5
HDAC6-202ENST00000376610 UBTFP17480 764 aaKnown RBP30.62■■■□□ 2.49
HDAC6-202ENST00000376610 RAPGEF3O95398 923 aa30.59■■■□□ 2.49
HDAC6-202ENST00000376610 EHMT2Q96KQ7 1210 aa30.57■■■□□ 2.48
HDAC6-202ENST00000376610 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
HDAC6-202ENST00000376610 HECW2Q9P2P5 1572 aa30.54■■■□□ 2.48
HDAC6-202ENST00000376610 CFAP74Q9C0B2 1584 aa30.53■■■□□ 2.48
HDAC6-202ENST00000376610 FMN1Q68DA7 1419 aa30.49■■■□□ 2.47
HDAC6-202ENST00000376610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.49■■■□□ 2.47
HDAC6-202ENST00000376610 FANCAO15360 1455 aa30.49■■■□□ 2.47
HDAC6-202ENST00000376610 FRMPD1Q5SYB0 1578 aa30.49■■■□□ 2.47
HDAC6-202ENST00000376610 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
HDAC6-202ENST00000376610 DENND4BO75064 1496 aaPredicted RBP30.47■■■□□ 2.47
HDAC6-202ENST00000376610 ATP1B4Q9UN42 357 aaPredicted RBP30.47■■■□□ 2.47
HDAC6-202ENST00000376610 AKNAQ7Z591 1439 aa30.47■■■□□ 2.47
HDAC6-202ENST00000376610 TTC37Q6PGP7 1564 aa30.45■■■□□ 2.47
HDAC6-202ENST00000376610 HECW1Q76N89 1606 aa30.45■■■□□ 2.47
HDAC6-202ENST00000376610 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.46
HDAC6-202ENST00000376610 ARHGAP35Q9NRY4 1499 aa30.41■■■□□ 2.46
HDAC6-202ENST00000376610 RICTORQ6R327 1708 aa30.41■■■□□ 2.46
HDAC6-202ENST00000376610 ADAMTSL3P82987 1691 aa30.4■■■□□ 2.46
HDAC6-202ENST00000376610 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
HDAC6-202ENST00000376610 ARHGEF40Q8TER5 1519 aa30.39■■■□□ 2.46
HDAC6-202ENST00000376610 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
HDAC6-202ENST00000376610 PTPRMP28827 1452 aa30.36■■■□□ 2.45
HDAC6-202ENST00000376610 PLCH2O75038 1416 aa30.32■■■□□ 2.44
HDAC6-202ENST00000376610 ZMYM4Q5VZL5 1548 aa30.31■■■□□ 2.44
HDAC6-202ENST00000376610 MADDQ8WXG6 1647 aa30.29■■■□□ 2.44
HDAC6-202ENST00000376610 MYO5CQ9NQX4 1742 aa30.29■■■□□ 2.44
HDAC6-202ENST00000376610 ZFYVE16Q7Z3T8 1539 aa30.28■■■□□ 2.44
HDAC6-202ENST00000376610 MAGI2Q86UL8 1455 aa30.27■■■□□ 2.44
HDAC6-202ENST00000376610 KIF14Q15058 1648 aa30.26■■■□□ 2.44
HDAC6-202ENST00000376610 POGZQ7Z3K3 1410 aa30.26■■■□□ 2.43
HDAC6-202ENST00000376610 SCAPERQ9BY12 1400 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms