RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
CCHCR1-201ENST00000376266 KIF21BO75037 1637 aa23.17■■□□□ 1.3
CCHCR1-201ENST00000376266 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
CCHCR1-201ENST00000376266 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
CCHCR1-201ENST00000376266 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
CCHCR1-201ENST00000376266 UBTFP17480 764 aaKnown RBP23.1■■□□□ 1.29
CCHCR1-201ENST00000376266 CHD1O14646 1710 aa23.09■■□□□ 1.29
CCHCR1-201ENST00000376266 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
CCHCR1-201ENST00000376266 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
CCHCR1-201ENST00000376266 NUP160Q12769 1436 aa22.98■■□□□ 1.27
CCHCR1-201ENST00000376266 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
CCHCR1-201ENST00000376266 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
CCHCR1-201ENST00000376266 TNIKQ9UKE5 1360 aa22.94■■□□□ 1.26
CCHCR1-201ENST00000376266 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
CCHCR1-201ENST00000376266 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
CCHCR1-201ENST00000376266 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
CCHCR1-201ENST00000376266 KIAA0586Q9BVV6 1533 aa22.9■■□□□ 1.26
CCHCR1-201ENST00000376266 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
CCHCR1-201ENST00000376266 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.24
CCHCR1-201ENST00000376266 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
CCHCR1-201ENST00000376266 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
CCHCR1-201ENST00000376266 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.23
CCHCR1-201ENST00000376266 CLIP1P30622 1438 aa22.75■■□□□ 1.23
CCHCR1-201ENST00000376266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
CCHCR1-201ENST00000376266 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
CCHCR1-201ENST00000376266 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
CCHCR1-201ENST00000376266 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
CCHCR1-201ENST00000376266 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
CCHCR1-201ENST00000376266 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
CCHCR1-201ENST00000376266 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
CCHCR1-201ENST00000376266 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
CCHCR1-201ENST00000376266 SAMD9Q5K651 1589 aa22.66■■□□□ 1.22
CCHCR1-201ENST00000376266 ERCC6L2Q5T890 1561 aa22.65■■□□□ 1.22
CCHCR1-201ENST00000376266 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.22
CCHCR1-201ENST00000376266 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.22
CCHCR1-201ENST00000376266 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
CCHCR1-201ENST00000376266 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
CCHCR1-201ENST00000376266 KIAA0556O60303 1618 aa22.63■■□□□ 1.21
CCHCR1-201ENST00000376266 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
CCHCR1-201ENST00000376266 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
CCHCR1-201ENST00000376266 PTPRGP23470 1445 aa22.5■■□□□ 1.19
CCHCR1-201ENST00000376266 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
CCHCR1-201ENST00000376266 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
CCHCR1-201ENST00000376266 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
CCHCR1-201ENST00000376266 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
CCHCR1-201ENST00000376266 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
CCHCR1-201ENST00000376266 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
CCHCR1-201ENST00000376266 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
CCHCR1-201ENST00000376266 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
CCHCR1-201ENST00000376266 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.18
CCHCR1-201ENST00000376266 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.18
CCHCR1-201ENST00000376266 PCF11O94913 1555 aaKnown RBP22.37■■□□□ 1.17
CCHCR1-201ENST00000376266 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
CCHCR1-201ENST00000376266 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
CCHCR1-201ENST00000376266 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
CCHCR1-201ENST00000376266 ABCA8O94911 1581 aa22.34■■□□□ 1.17
CCHCR1-201ENST00000376266 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
CCHCR1-201ENST00000376266 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
CCHCR1-201ENST00000376266 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
CCHCR1-201ENST00000376266 NUP153P49790 1475 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-201ENST00000376266 ABCC2Q92887 1545 aa22.28■■□□□ 1.16
CCHCR1-201ENST00000376266 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
CCHCR1-201ENST00000376266 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
CCHCR1-201ENST00000376266 UHRF1BP1LA0JNW5 1464 aa22.25■■□□□ 1.15
CCHCR1-201ENST00000376266 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
CCHCR1-201ENST00000376266 LRRIQ1Q96JM4 1722 aa22.24■■□□□ 1.15
CCHCR1-201ENST00000376266 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
CCHCR1-201ENST00000376266 APLP2Q06481 763 aa22.23■■□□□ 1.15
CCHCR1-201ENST00000376266 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
CCHCR1-201ENST00000376266 ATP10BO94823 1461 aa22.21■■□□□ 1.15
CCHCR1-201ENST00000376266 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
CCHCR1-201ENST00000376266 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
CCHCR1-201ENST00000376266 MIER1Q8N108 512 aa22.16■■□□□ 1.14
CCHCR1-201ENST00000376266 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
CCHCR1-201ENST00000376266 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
CCHCR1-201ENST00000376266 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCHCR1-201ENST00000376266 ZCCHC11Q5TAX3 1644 aaKnown RBP22.14■■□□□ 1.14
CCHCR1-201ENST00000376266 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
CCHCR1-201ENST00000376266 MAP3K1Q13233 1512 aa22.12■■□□□ 1.13
CCHCR1-201ENST00000376266 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
CCHCR1-201ENST00000376266 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
CCHCR1-201ENST00000376266 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
CCHCR1-201ENST00000376266 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
CCHCR1-201ENST00000376266 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
CCHCR1-201ENST00000376266 ASXL2Q76L83 1435 aa22.03■■□□□ 1.12
CCHCR1-201ENST00000376266 KCNH8Q96L42 1107 aa22.02■■□□□ 1.12
CCHCR1-201ENST00000376266 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
CCHCR1-201ENST00000376266 EHBP1L1Q8N3D4 1523 aa21.99■■□□□ 1.11
CCHCR1-201ENST00000376266 WDR7Q9Y4E6 1490 aa21.99■■□□□ 1.11
CCHCR1-201ENST00000376266 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
CCHCR1-201ENST00000376266 KIF14Q15058 1648 aa21.94■■□□□ 1.1
CCHCR1-201ENST00000376266 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
CCHCR1-201ENST00000376266 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
CCHCR1-201ENST00000376266 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
CCHCR1-201ENST00000376266 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
CCHCR1-201ENST00000376266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.86■■□□□ 1.091e-5■■■■□ 25.8
CCHCR1-201ENST00000376266 ABCC10Q5T3U5 1492 aa21.85■■□□□ 1.09
CCHCR1-201ENST00000376266 ANP32EQ9BTT0 268 aa21.85■■□□□ 1.09
CCHCR1-201ENST00000376266 SUPT16HQ9Y5B9 1047 aaKnown RBP21.85■■□□□ 1.09
CCHCR1-201ENST00000376266 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms