RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
SVEP1-201ENST00000374461 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
SVEP1-201ENST00000374461 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
SVEP1-201ENST00000374461 ARID3CA6NKF2 412 aa18.27■□□□□ 0.51
SVEP1-201ENST00000374461 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
SVEP1-201ENST00000374461 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
SVEP1-201ENST00000374461 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
SVEP1-201ENST00000374461 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
SVEP1-201ENST00000374461 CUL7Q14999 1698 aa18.21■□□□□ 0.51
SVEP1-201ENST00000374461 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
SVEP1-201ENST00000374461 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
SVEP1-201ENST00000374461 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
SVEP1-201ENST00000374461 ITGAEP38570 1179 aa18.18■□□□□ 0.5
SVEP1-201ENST00000374461 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
SVEP1-201ENST00000374461 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
SVEP1-201ENST00000374461 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
SVEP1-201ENST00000374461 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
SVEP1-201ENST00000374461 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
SVEP1-201ENST00000374461 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
SVEP1-201ENST00000374461 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
SVEP1-201ENST00000374461 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.48
SVEP1-201ENST00000374461 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
SVEP1-201ENST00000374461 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
SVEP1-201ENST00000374461 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
SVEP1-201ENST00000374461 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
SVEP1-201ENST00000374461 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
SVEP1-201ENST00000374461 IQGAP2Q13576 1575 aa17.99■□□□□ 0.47
SVEP1-201ENST00000374461 PCF11O94913 1555 aaKnown RBP17.98■□□□□ 0.47
SVEP1-201ENST00000374461 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
SVEP1-201ENST00000374461 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
SVEP1-201ENST00000374461 KIAA0586Q9BVV6 1533 aa17.95■□□□□ 0.46
SVEP1-201ENST00000374461 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
SVEP1-201ENST00000374461 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
SVEP1-201ENST00000374461 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
SVEP1-201ENST00000374461 FYCO1Q9BQS8 1478 aa17.89■□□□□ 0.45
SVEP1-201ENST00000374461 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
SVEP1-201ENST00000374461 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
SVEP1-201ENST00000374461 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
SVEP1-201ENST00000374461 CEP170Q5SW79 1584 aa17.88■□□□□ 0.45
SVEP1-201ENST00000374461 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
SVEP1-201ENST00000374461 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
SVEP1-201ENST00000374461 DISP1Q96F81 1524 aa17.83■□□□□ 0.45
SVEP1-201ENST00000374461 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
SVEP1-201ENST00000374461 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
SVEP1-201ENST00000374461 NUP160Q12769 1436 aa17.81■□□□□ 0.44
SVEP1-201ENST00000374461 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
SVEP1-201ENST00000374461 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
SVEP1-201ENST00000374461 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
SVEP1-201ENST00000374461 PLB1Q6P1J6 1458 aa17.79■□□□□ 0.44
SVEP1-201ENST00000374461 KIAA0556O60303 1618 aa17.76■□□□□ 0.43
SVEP1-201ENST00000374461 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
SVEP1-201ENST00000374461 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
SVEP1-201ENST00000374461 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
SVEP1-201ENST00000374461 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
SVEP1-201ENST00000374461 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
SVEP1-201ENST00000374461 ZNF777Q9ULD5 760 aaPredicted RBP17.73■□□□□ 0.43
SVEP1-201ENST00000374461 PTPRGP23470 1445 aa17.72■□□□□ 0.43
SVEP1-201ENST00000374461 NCOA2Q15596 1464 aa17.71■□□□□ 0.43
SVEP1-201ENST00000374461 CHD1O14646 1710 aa17.69■□□□□ 0.42
SVEP1-201ENST00000374461 CFAP43Q8NDM7 1665 aa17.69■□□□□ 0.42
SVEP1-201ENST00000374461 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
SVEP1-201ENST00000374461 NUP153P49790 1475 aaKnown RBP17.68■□□□□ 0.42
SVEP1-201ENST00000374461 HECW1Q76N89 1606 aa17.68■□□□□ 0.42
SVEP1-201ENST00000374461 MAGI3Q5TCQ9 1506 aa17.68■□□□□ 0.42
SVEP1-201ENST00000374461 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
SVEP1-201ENST00000374461 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
SVEP1-201ENST00000374461 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
SVEP1-201ENST00000374461 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SVEP1-201ENST00000374461 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
SVEP1-201ENST00000374461 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
SVEP1-201ENST00000374461 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.42
SVEP1-201ENST00000374461 RRP7BPQ9NSQ0 103 aa17.64■□□□□ 0.42
SVEP1-201ENST00000374461 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
SVEP1-201ENST00000374461 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
SVEP1-201ENST00000374461 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
SVEP1-201ENST00000374461 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
SVEP1-201ENST00000374461 ERCC6L2Q5T890 1561 aa17.6■□□□□ 0.41
SVEP1-201ENST00000374461 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
SVEP1-201ENST00000374461 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
SVEP1-201ENST00000374461 SUPT6HQ7KZ85 1726 aaKnown RBP17.56■□□□□ 0.4
SVEP1-201ENST00000374461 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
SVEP1-201ENST00000374461 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
SVEP1-201ENST00000374461 ATP10BO94823 1461 aa17.54■□□□□ 0.4
SVEP1-201ENST00000374461 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
SVEP1-201ENST00000374461 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
SVEP1-201ENST00000374461 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
SVEP1-201ENST00000374461 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
SVEP1-201ENST00000374461 UACAQ9BZF9 1416 aa17.52■□□□□ 0.39
SVEP1-201ENST00000374461 MIER1Q8N108 512 aa17.51■□□□□ 0.39
SVEP1-201ENST00000374461 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
SVEP1-201ENST00000374461 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
SVEP1-201ENST00000374461 PTPN23Q9H3S7 1636 aa17.46■□□□□ 0.39
SVEP1-201ENST00000374461 ABCA8O94911 1581 aa17.45■□□□□ 0.38
SVEP1-201ENST00000374461 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
SVEP1-201ENST00000374461 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
SVEP1-201ENST00000374461 KIF14Q15058 1648 aa17.43■□□□□ 0.38
SVEP1-201ENST00000374461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
SVEP1-201ENST00000374461 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
SVEP1-201ENST00000374461 MIA2Q96PC5 1412 aa17.41■□□□□ 0.38
SVEP1-201ENST00000374461 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms