RNA–Protein interactions for RNA: ENST00000374446.6

ZNF239-202, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-202ENST00000374446 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
ZNF239-202ENST00000374446 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
ZNF239-202ENST00000374446 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
ZNF239-202ENST00000374446 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
ZNF239-202ENST00000374446 KIAA0586Q9BVV6 1533 aa18.96■□□□□ 0.63
ZNF239-202ENST00000374446 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
ZNF239-202ENST00000374446 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
ZNF239-202ENST00000374446 NUP160Q12769 1436 aa18.94■□□□□ 0.62
ZNF239-202ENST00000374446 IQGAP2Q13576 1575 aa18.93■□□□□ 0.62
ZNF239-202ENST00000374446 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
ZNF239-202ENST00000374446 EFCAB5A4FU69 1503 aa18.91■□□□□ 0.62
ZNF239-202ENST00000374446 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
ZNF239-202ENST00000374446 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
ZNF239-202ENST00000374446 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
ZNF239-202ENST00000374446 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
ZNF239-202ENST00000374446 CHD1O14646 1710 aa18.85■□□□□ 0.61
ZNF239-202ENST00000374446 APLP2Q06481 763 aa18.83■□□□□ 0.6
ZNF239-202ENST00000374446 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
ZNF239-202ENST00000374446 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
ZNF239-202ENST00000374446 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
ZNF239-202ENST00000374446 CARMIL2Q6F5E8 1435 aa18.75■□□□□ 0.59
ZNF239-202ENST00000374446 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
ZNF239-202ENST00000374446 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
ZNF239-202ENST00000374446 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
ZNF239-202ENST00000374446 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
ZNF239-202ENST00000374446 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
ZNF239-202ENST00000374446 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
ZNF239-202ENST00000374446 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
ZNF239-202ENST00000374446 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
ZNF239-202ENST00000374446 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
ZNF239-202ENST00000374446 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
ZNF239-202ENST00000374446 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
ZNF239-202ENST00000374446 SHROOM2Q13796 1616 aa18.64■□□□□ 0.58
ZNF239-202ENST00000374446 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
ZNF239-202ENST00000374446 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
ZNF239-202ENST00000374446 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
ZNF239-202ENST00000374446 PTPRGP23470 1445 aa18.59■□□□□ 0.57
ZNF239-202ENST00000374446 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
ZNF239-202ENST00000374446 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
ZNF239-202ENST00000374446 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
ZNF239-202ENST00000374446 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
ZNF239-202ENST00000374446 CCDC18Q5T9S5 1454 aa18.53■□□□□ 0.56
ZNF239-202ENST00000374446 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
ZNF239-202ENST00000374446 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
ZNF239-202ENST00000374446 EPRSP07814 1512 aaKnown RBP18.52■□□□□ 0.56
ZNF239-202ENST00000374446 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
ZNF239-202ENST00000374446 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
ZNF239-202ENST00000374446 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
ZNF239-202ENST00000374446 ABCA8O94911 1581 aa18.49■□□□□ 0.55
ZNF239-202ENST00000374446 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
ZNF239-202ENST00000374446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
ZNF239-202ENST00000374446 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
ZNF239-202ENST00000374446 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
ZNF239-202ENST00000374446 UACAQ9BZF9 1416 aa18.46■□□□□ 0.55
ZNF239-202ENST00000374446 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
ZNF239-202ENST00000374446 ATP10BO94823 1461 aa18.41■□□□□ 0.54
ZNF239-202ENST00000374446 MAGI3Q5TCQ9 1506 aa18.4■□□□□ 0.54
ZNF239-202ENST00000374446 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
ZNF239-202ENST00000374446 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
ZNF239-202ENST00000374446 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
ZNF239-202ENST00000374446 ABCC2Q92887 1545 aa18.37■□□□□ 0.53
ZNF239-202ENST00000374446 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
ZNF239-202ENST00000374446 RRBP1Q9P2E9 1410 aaKnown RBP18.35■□□□□ 0.53
ZNF239-202ENST00000374446 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
ZNF239-202ENST00000374446 TROQ12816 1431 aaPredicted RBP18.34■□□□□ 0.53
ZNF239-202ENST00000374446 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
ZNF239-202ENST00000374446 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
ZNF239-202ENST00000374446 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
ZNF239-202ENST00000374446 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
ZNF239-202ENST00000374446 MYOM3Q5VTT5 1437 aa18.28■□□□□ 0.52
ZNF239-202ENST00000374446 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
ZNF239-202ENST00000374446 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
ZNF239-202ENST00000374446 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
ZNF239-202ENST00000374446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.22■□□□□ 0.51
ZNF239-202ENST00000374446 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
ZNF239-202ENST00000374446 ZCCHC11Q5TAX3 1644 aaKnown RBP18.21■□□□□ 0.51
ZNF239-202ENST00000374446 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
ZNF239-202ENST00000374446 ITGAEP38570 1179 aa18.2■□□□□ 0.5
ZNF239-202ENST00000374446 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
ZNF239-202ENST00000374446 KIF14Q15058 1648 aa18.19■□□□□ 0.5
ZNF239-202ENST00000374446 KCNH8Q96L42 1107 aa18.19■□□□□ 0.5
ZNF239-202ENST00000374446 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
ZNF239-202ENST00000374446 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
ZNF239-202ENST00000374446 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
ZNF239-202ENST00000374446 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
ZNF239-202ENST00000374446 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
ZNF239-202ENST00000374446 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
ZNF239-202ENST00000374446 PTPN23Q9H3S7 1636 aa18.14■□□□□ 0.49
ZNF239-202ENST00000374446 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
ZNF239-202ENST00000374446 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
ZNF239-202ENST00000374446 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
ZNF239-202ENST00000374446 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
ZNF239-202ENST00000374446 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
ZNF239-202ENST00000374446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
ZNF239-202ENST00000374446 ITSN2Q9NZM3 1697 aa18.08■□□□□ 0.48
ZNF239-202ENST00000374446 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
ZNF239-202ENST00000374446 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
ZNF239-202ENST00000374446 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
ZNF239-202ENST00000374446 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
ZNF239-202ENST00000374446 PLCH2O75038 1416 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms