RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 GRIN2BQ13224 1484 aa19.64■□□□□ 0.74
PRPF4-202ENST00000374199 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
PRPF4-202ENST00000374199 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
PRPF4-202ENST00000374199 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
PRPF4-202ENST00000374199 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
PRPF4-202ENST00000374199 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.73
PRPF4-202ENST00000374199 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
PRPF4-202ENST00000374199 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
PRPF4-202ENST00000374199 LRRIQ1Q96JM4 1722 aa19.54■□□□□ 0.72
PRPF4-202ENST00000374199 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
PRPF4-202ENST00000374199 UGGT2Q9NYU1 1516 aa19.52■□□□□ 0.72
PRPF4-202ENST00000374199 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
PRPF4-202ENST00000374199 IQGAP2Q13576 1575 aa19.52■□□□□ 0.72
PRPF4-202ENST00000374199 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
PRPF4-202ENST00000374199 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
PRPF4-202ENST00000374199 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
PRPF4-202ENST00000374199 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
PRPF4-202ENST00000374199 FMN1Q68DA7 1419 aa19.43■□□□□ 0.7
PRPF4-202ENST00000374199 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
PRPF4-202ENST00000374199 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
PRPF4-202ENST00000374199 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
PRPF4-202ENST00000374199 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
PRPF4-202ENST00000374199 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
PRPF4-202ENST00000374199 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
PRPF4-202ENST00000374199 NUP160Q12769 1436 aa19.37■□□□□ 0.69
PRPF4-202ENST00000374199 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
PRPF4-202ENST00000374199 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
PRPF4-202ENST00000374199 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
PRPF4-202ENST00000374199 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
PRPF4-202ENST00000374199 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
PRPF4-202ENST00000374199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.28■□□□□ 0.68
PRPF4-202ENST00000374199 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
PRPF4-202ENST00000374199 APLP2Q06481 763 aa19.27■□□□□ 0.68
PRPF4-202ENST00000374199 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
PRPF4-202ENST00000374199 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
PRPF4-202ENST00000374199 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
PRPF4-202ENST00000374199 MAGI3Q5TCQ9 1506 aa19.22■□□□□ 0.67
PRPF4-202ENST00000374199 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
PRPF4-202ENST00000374199 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.67
PRPF4-202ENST00000374199 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
PRPF4-202ENST00000374199 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
PRPF4-202ENST00000374199 CHD1O14646 1710 aa19.19■□□□□ 0.66
PRPF4-202ENST00000374199 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
PRPF4-202ENST00000374199 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
PRPF4-202ENST00000374199 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
PRPF4-202ENST00000374199 TCOF1Q13428 1488 aaKnown RBP19.11■□□□□ 0.65
PRPF4-202ENST00000374199 ABCA8O94911 1581 aa19.11■□□□□ 0.65
PRPF4-202ENST00000374199 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
PRPF4-202ENST00000374199 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
PRPF4-202ENST00000374199 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
PRPF4-202ENST00000374199 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
PRPF4-202ENST00000374199 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
PRPF4-202ENST00000374199 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
PRPF4-202ENST00000374199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
PRPF4-202ENST00000374199 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
PRPF4-202ENST00000374199 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
PRPF4-202ENST00000374199 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
PRPF4-202ENST00000374199 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
PRPF4-202ENST00000374199 MIA2Q96PC5 1412 aa18.99■□□□□ 0.63
PRPF4-202ENST00000374199 CARMIL2Q6F5E8 1435 aa18.98■□□□□ 0.63
PRPF4-202ENST00000374199 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
PRPF4-202ENST00000374199 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
PRPF4-202ENST00000374199 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
PRPF4-202ENST00000374199 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
PRPF4-202ENST00000374199 AKNAQ7Z591 1439 aa18.95■□□□□ 0.62
PRPF4-202ENST00000374199 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
PRPF4-202ENST00000374199 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
PRPF4-202ENST00000374199 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
PRPF4-202ENST00000374199 PLB1Q6P1J6 1458 aa18.93■□□□□ 0.62
PRPF4-202ENST00000374199 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
PRPF4-202ENST00000374199 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
PRPF4-202ENST00000374199 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
PRPF4-202ENST00000374199 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
PRPF4-202ENST00000374199 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
PRPF4-202ENST00000374199 TROQ12816 1431 aaPredicted RBP18.89■□□□□ 0.61
PRPF4-202ENST00000374199 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
PRPF4-202ENST00000374199 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
PRPF4-202ENST00000374199 KIF14Q15058 1648 aa18.87■□□□□ 0.61
PRPF4-202ENST00000374199 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
PRPF4-202ENST00000374199 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
PRPF4-202ENST00000374199 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
PRPF4-202ENST00000374199 ATP10BO94823 1461 aa18.84■□□□□ 0.61
PRPF4-202ENST00000374199 ERCC6L2Q5T890 1561 aa18.82■□□□□ 0.6
PRPF4-202ENST00000374199 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
PRPF4-202ENST00000374199 NAIPQ13075 1403 aa18.8■□□□□ 0.6
PRPF4-202ENST00000374199 ABCC2Q92887 1545 aa18.79■□□□□ 0.6
PRPF4-202ENST00000374199 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
PRPF4-202ENST00000374199 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
PRPF4-202ENST00000374199 ROCK1Q13464 1354 aa18.77■□□□□ 0.59
PRPF4-202ENST00000374199 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
PRPF4-202ENST00000374199 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
PRPF4-202ENST00000374199 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
PRPF4-202ENST00000374199 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
PRPF4-202ENST00000374199 PTPRGP23470 1445 aa18.73■□□□□ 0.59
PRPF4-202ENST00000374199 DAPK1P53355 1430 aa18.72■□□□□ 0.59
PRPF4-202ENST00000374199 CDC42BPBQ9Y5S2 1711 aa18.72■□□□□ 0.59
PRPF4-202ENST00000374199 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
PRPF4-202ENST00000374199 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
PRPF4-202ENST00000374199 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
PRPF4-202ENST00000374199 KDM6BO15054 1643 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms