RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
C9orf43-202ENST00000374165 CTTNBP2Q8WZ74 1663 aa28.31■■■□□ 2.12
C9orf43-202ENST00000374165 NUP160Q12769 1436 aa28.29■■■□□ 2.12
C9orf43-202ENST00000374165 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
C9orf43-202ENST00000374165 KIAA0586Q9BVV6 1533 aa28.22■■■□□ 2.11
C9orf43-202ENST00000374165 IQGAP2Q13576 1575 aa28.19■■■□□ 2.1
C9orf43-202ENST00000374165 CLIP1P30622 1438 aa28.13■■■□□ 2.09
C9orf43-202ENST00000374165 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
C9orf43-202ENST00000374165 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
C9orf43-202ENST00000374165 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.09
C9orf43-202ENST00000374165 ARHGAP35Q9NRY4 1499 aa28.07■■■□□ 2.08
C9orf43-202ENST00000374165 P3H3Q8IVL6 736 aa28.06■■■□□ 2.08
C9orf43-202ENST00000374165 UGGT2Q9NYU1 1516 aa28.04■■■□□ 2.08
C9orf43-202ENST00000374165 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
C9orf43-202ENST00000374165 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
C9orf43-202ENST00000374165 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
C9orf43-202ENST00000374165 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
C9orf43-202ENST00000374165 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.06
C9orf43-202ENST00000374165 EFCAB5A4FU69 1503 aa27.95■■■□□ 2.06
C9orf43-202ENST00000374165 PRG4Q92954 1404 aaPredicted RBP27.94■■■□□ 2.06
C9orf43-202ENST00000374165 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
C9orf43-202ENST00000374165 KIAA0556O60303 1618 aa27.92■■■□□ 2.06
C9orf43-202ENST00000374165 TTBK1Q5TCY1 1321 aaPredicted RBP27.86■■■□□ 2.05
C9orf43-202ENST00000374165 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
C9orf43-202ENST00000374165 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
C9orf43-202ENST00000374165 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
C9orf43-202ENST00000374165 PTPRGP23470 1445 aa27.69■■■□□ 2.02
C9orf43-202ENST00000374165 PCF11O94913 1555 aaKnown RBP27.67■■■□□ 2.02
C9orf43-202ENST00000374165 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
C9orf43-202ENST00000374165 PLB1Q6P1J6 1458 aa27.65■■■□□ 2.02
C9orf43-202ENST00000374165 ATP1B4Q9UN42 357 aaPredicted RBP27.64■■■□□ 2.02
C9orf43-202ENST00000374165 CASKIN1Q8WXD9 1431 aa27.62■■■□□ 2.01
C9orf43-202ENST00000374165 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
C9orf43-202ENST00000374165 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
C9orf43-202ENST00000374165 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
C9orf43-202ENST00000374165 LRRIQ1Q96JM4 1722 aa27.57■■■□□ 2
C9orf43-202ENST00000374165 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
C9orf43-202ENST00000374165 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
C9orf43-202ENST00000374165 ARID3CA6NKF2 412 aa27.57■■■□□ 2
C9orf43-202ENST00000374165 ABCA8O94911 1581 aa27.55■■■□□ 2
C9orf43-202ENST00000374165 PPARGC1BQ86YN6 1023 aaKnown RBP27.54■■■□□ 2
C9orf43-202ENST00000374165 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
C9orf43-202ENST00000374165 UACAQ9BZF9 1416 aa27.51■■□□□ 1.99
C9orf43-202ENST00000374165 HECW1Q76N89 1606 aa27.48■■□□□ 1.99
C9orf43-202ENST00000374165 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
C9orf43-202ENST00000374165 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.99
C9orf43-202ENST00000374165 CDK13Q14004 1512 aaKnown RBP27.45■■□□□ 1.98
C9orf43-202ENST00000374165 APLP2Q06481 763 aa27.45■■□□□ 1.98
C9orf43-202ENST00000374165 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.98
C9orf43-202ENST00000374165 ABCC2Q92887 1545 aa27.43■■□□□ 1.98
C9orf43-202ENST00000374165 ADCY10Q96PN6 1610 aa27.42■■□□□ 1.98
C9orf43-202ENST00000374165 TIAM1Q13009 1591 aa27.42■■□□□ 1.98
C9orf43-202ENST00000374165 ATP10BO94823 1461 aa27.39■■□□□ 1.98
C9orf43-202ENST00000374165 UHRF1BP1LA0JNW5 1464 aa27.38■■□□□ 1.97
C9orf43-202ENST00000374165 CFAP43Q8NDM7 1665 aa27.38■■□□□ 1.97
C9orf43-202ENST00000374165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
C9orf43-202ENST00000374165 HNRNPUL2Q1KMD3 747 aaKnown RBP27.37■■□□□ 1.97
C9orf43-202ENST00000374165 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
C9orf43-202ENST00000374165 CCDC18Q5T9S5 1454 aa27.36■■□□□ 1.97
C9orf43-202ENST00000374165 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
C9orf43-202ENST00000374165 MAGI3Q5TCQ9 1506 aa27.33■■□□□ 1.97
C9orf43-202ENST00000374165 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
C9orf43-202ENST00000374165 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
C9orf43-202ENST00000374165 ZCCHC11Q5TAX3 1644 aaKnown RBP27.28■■□□□ 1.96
C9orf43-202ENST00000374165 MTUS2Q5JR59 1369 aa27.24■■□□□ 1.95
C9orf43-202ENST00000374165 CDK11AQ9UQ88 783 aaPredicted RBP27.19■■□□□ 1.94
C9orf43-202ENST00000374165 PLEKHD1A6NEE1 506 aa27.19■■□□□ 1.94
C9orf43-202ENST00000374165 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
C9orf43-202ENST00000374165 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
C9orf43-202ENST00000374165 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
C9orf43-202ENST00000374165 KIF14Q15058 1648 aa27.11■■□□□ 1.93
C9orf43-202ENST00000374165 ASXL2Q76L83 1435 aa27.1■■□□□ 1.93
C9orf43-202ENST00000374165 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
C9orf43-202ENST00000374165 NCOA2Q15596 1464 aa27.09■■□□□ 1.93
C9orf43-202ENST00000374165 SUPT6HQ7KZ85 1726 aaKnown RBP27.09■■□□□ 1.93
C9orf43-202ENST00000374165 PHLDB1Q86UU1 1377 aa27.07■■□□□ 1.92
C9orf43-202ENST00000374165 WDR7Q9Y4E6 1490 aa27.05■■□□□ 1.92
C9orf43-202ENST00000374165 PCGF6Q9BYE7 350 aa27.02■■□□□ 1.92
C9orf43-202ENST00000374165 MAPKBP1O60336 1514 aa26.99■■□□□ 1.91
C9orf43-202ENST00000374165 ABCC10Q5T3U5 1492 aa26.98■■□□□ 1.91
C9orf43-202ENST00000374165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.97■■□□□ 1.91
C9orf43-202ENST00000374165 TTC37Q6PGP7 1564 aa26.95■■□□□ 1.91
C9orf43-202ENST00000374165 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
C9orf43-202ENST00000374165 MYOM3Q5VTT5 1437 aa26.92■■□□□ 1.9
C9orf43-202ENST00000374165 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
C9orf43-202ENST00000374165 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
C9orf43-202ENST00000374165 CDC42BPAQ5VT25 1732 aa26.9■■□□□ 1.9
C9orf43-202ENST00000374165 FGD6Q6ZV73 1430 aa26.87■■□□□ 1.89
C9orf43-202ENST00000374165 RRBP1Q9P2E9 1410 aaKnown RBP26.86■■□□□ 1.89
C9orf43-202ENST00000374165 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
C9orf43-202ENST00000374165 CDC42BPBQ9Y5S2 1711 aa26.84■■□□□ 1.89
C9orf43-202ENST00000374165 ZNF644Q9H582 1327 aaPredicted RBP26.83■■□□□ 1.89
C9orf43-202ENST00000374165 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
C9orf43-202ENST00000374165 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
C9orf43-202ENST00000374165 ITSN2Q9NZM3 1697 aa26.81■■□□□ 1.88
C9orf43-202ENST00000374165 PREX2Q70Z35 1606 aa26.8■■□□□ 1.88
C9orf43-202ENST00000374165 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
C9orf43-202ENST00000374165 FAM69CQ0P6D2 419 aa26.79■■□□□ 1.88
C9orf43-202ENST00000374165 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
C9orf43-202ENST00000374165 ZNF777Q9ULD5 760 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms