RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
GJB1-202ENST00000374022 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
GJB1-202ENST00000374022 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
GJB1-202ENST00000374022 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
GJB1-202ENST00000374022 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.91
GJB1-202ENST00000374022 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
GJB1-202ENST00000374022 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
GJB1-202ENST00000374022 UGGT2Q9NYU1 1516 aa20.67■□□□□ 0.9
GJB1-202ENST00000374022 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
GJB1-202ENST00000374022 SAMD9Q5K651 1589 aa20.62■□□□□ 0.89
GJB1-202ENST00000374022 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
GJB1-202ENST00000374022 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
GJB1-202ENST00000374022 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
GJB1-202ENST00000374022 CLIP1P30622 1438 aa20.6■□□□□ 0.89
GJB1-202ENST00000374022 KIAA0556O60303 1618 aa20.58■□□□□ 0.89
GJB1-202ENST00000374022 DISP1Q96F81 1524 aa20.57■□□□□ 0.88
GJB1-202ENST00000374022 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
GJB1-202ENST00000374022 PRG4Q92954 1404 aaPredicted RBP20.56■□□□□ 0.88
GJB1-202ENST00000374022 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
GJB1-202ENST00000374022 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
GJB1-202ENST00000374022 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
GJB1-202ENST00000374022 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
GJB1-202ENST00000374022 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
GJB1-202ENST00000374022 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
GJB1-202ENST00000374022 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
GJB1-202ENST00000374022 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
GJB1-202ENST00000374022 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
GJB1-202ENST00000374022 FMN1Q68DA7 1419 aa20.37■□□□□ 0.85
GJB1-202ENST00000374022 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
GJB1-202ENST00000374022 PTPRGP23470 1445 aa20.36■□□□□ 0.85
GJB1-202ENST00000374022 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
GJB1-202ENST00000374022 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
GJB1-202ENST00000374022 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
GJB1-202ENST00000374022 ABCA8O94911 1581 aa20.31■□□□□ 0.84
GJB1-202ENST00000374022 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
GJB1-202ENST00000374022 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
GJB1-202ENST00000374022 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
GJB1-202ENST00000374022 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
GJB1-202ENST00000374022 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
GJB1-202ENST00000374022 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
GJB1-202ENST00000374022 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
GJB1-202ENST00000374022 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
GJB1-202ENST00000374022 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
GJB1-202ENST00000374022 UHRF1BP1LA0JNW5 1464 aa20.22■□□□□ 0.83
GJB1-202ENST00000374022 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
GJB1-202ENST00000374022 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
GJB1-202ENST00000374022 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
GJB1-202ENST00000374022 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
GJB1-202ENST00000374022 EPRSP07814 1512 aaKnown RBP20.17■□□□□ 0.82
GJB1-202ENST00000374022 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
GJB1-202ENST00000374022 ZCCHC11Q5TAX3 1644 aaKnown RBP20.15■□□□□ 0.82
GJB1-202ENST00000374022 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
GJB1-202ENST00000374022 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
GJB1-202ENST00000374022 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
GJB1-202ENST00000374022 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
GJB1-202ENST00000374022 ATP10BO94823 1461 aa20.11■□□□□ 0.81
GJB1-202ENST00000374022 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
GJB1-202ENST00000374022 APLP2Q06481 763 aa20.09■□□□□ 0.81
GJB1-202ENST00000374022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
GJB1-202ENST00000374022 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
GJB1-202ENST00000374022 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.8
GJB1-202ENST00000374022 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.79
GJB1-202ENST00000374022 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
GJB1-202ENST00000374022 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
GJB1-202ENST00000374022 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
GJB1-202ENST00000374022 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
GJB1-202ENST00000374022 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
GJB1-202ENST00000374022 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
GJB1-202ENST00000374022 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
GJB1-202ENST00000374022 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
GJB1-202ENST00000374022 WDR7Q9Y4E6 1490 aa19.95■□□□□ 0.78
GJB1-202ENST00000374022 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
GJB1-202ENST00000374022 SUPT6HQ7KZ85 1726 aaKnown RBP19.95■□□□□ 0.78
GJB1-202ENST00000374022 KIF14Q15058 1648 aa19.93■□□□□ 0.78
GJB1-202ENST00000374022 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
GJB1-202ENST00000374022 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
GJB1-202ENST00000374022 TTC37Q6PGP7 1564 aa19.84■□□□□ 0.77
GJB1-202ENST00000374022 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
GJB1-202ENST00000374022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.84■□□□□ 0.77
GJB1-202ENST00000374022 DIP2BQ9P265 1576 aa19.83■□□□□ 0.77
GJB1-202ENST00000374022 ABCA9Q8IUA7 1624 aa19.83■□□□□ 0.77
GJB1-202ENST00000374022 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.76
GJB1-202ENST00000374022 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
GJB1-202ENST00000374022 KIF13AQ9H1H9 1805 aa19.82■□□□□ 0.76
GJB1-202ENST00000374022 MYO5CQ9NQX4 1742 aa19.82■□□□□ 0.76
GJB1-202ENST00000374022 ITSN2Q9NZM3 1697 aa19.81■□□□□ 0.76
GJB1-202ENST00000374022 GLI2P10070 1586 aa19.8■□□□□ 0.76
GJB1-202ENST00000374022 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
GJB1-202ENST00000374022 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
GJB1-202ENST00000374022 CDC42BPBQ9Y5S2 1711 aa19.77■□□□□ 0.76
GJB1-202ENST00000374022 MAP3K4Q9Y6R4 1608 aa19.76■□□□□ 0.75
GJB1-202ENST00000374022 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
GJB1-202ENST00000374022 GPATCH8Q9UKJ3 1502 aaKnown RBP19.75■□□□□ 0.75
GJB1-202ENST00000374022 MYOM3Q5VTT5 1437 aa19.75■□□□□ 0.75
GJB1-202ENST00000374022 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
GJB1-202ENST00000374022 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
GJB1-202ENST00000374022 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
GJB1-202ENST00000374022 CD109Q6YHK3 1445 aa19.69■□□□□ 0.74
GJB1-202ENST00000374022 PLCH2O75038 1416 aa19.69■□□□□ 0.74
GJB1-202ENST00000374022 FGD6Q6ZV73 1430 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms