RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 KIF21BO75037 1637 aa17.25■□□□□ 0.35
PUM1-202ENST00000373741 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
PUM1-202ENST00000373741 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
PUM1-202ENST00000373741 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
PUM1-202ENST00000373741 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
PUM1-202ENST00000373741 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
PUM1-202ENST00000373741 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
PUM1-202ENST00000373741 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
PUM1-202ENST00000373741 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
PUM1-202ENST00000373741 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
PUM1-202ENST00000373741 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
PUM1-202ENST00000373741 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
PUM1-202ENST00000373741 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
PUM1-202ENST00000373741 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
PUM1-202ENST00000373741 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
PUM1-202ENST00000373741 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
PUM1-202ENST00000373741 GRIN2BQ13224 1484 aa17■□□□□ 0.31
PUM1-202ENST00000373741 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
PUM1-202ENST00000373741 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
PUM1-202ENST00000373741 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
PUM1-202ENST00000373741 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
PUM1-202ENST00000373741 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
PUM1-202ENST00000373741 FMN1Q68DA7 1419 aa16.9■□□□□ 0.3
PUM1-202ENST00000373741 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
PUM1-202ENST00000373741 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
PUM1-202ENST00000373741 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PUM1-202ENST00000373741 TRIM52Q96A61 297 aa16.86■□□□□ 0.29
PUM1-202ENST00000373741 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
PUM1-202ENST00000373741 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
PUM1-202ENST00000373741 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
PUM1-202ENST00000373741 WDR62O43379 1518 aa16.84■□□□□ 0.29
PUM1-202ENST00000373741 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
PUM1-202ENST00000373741 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
PUM1-202ENST00000373741 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
PUM1-202ENST00000373741 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
PUM1-202ENST00000373741 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
PUM1-202ENST00000373741 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
PUM1-202ENST00000373741 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
PUM1-202ENST00000373741 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.27
PUM1-202ENST00000373741 CARMIL2Q6F5E8 1435 aa16.76■□□□□ 0.27
PUM1-202ENST00000373741 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
PUM1-202ENST00000373741 CASKIN1Q8WXD9 1431 aa16.75■□□□□ 0.27
PUM1-202ENST00000373741 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
PUM1-202ENST00000373741 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
PUM1-202ENST00000373741 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
PUM1-202ENST00000373741 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
PUM1-202ENST00000373741 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
PUM1-202ENST00000373741 TIAM1Q13009 1591 aa16.71■□□□□ 0.27
PUM1-202ENST00000373741 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
PUM1-202ENST00000373741 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
PUM1-202ENST00000373741 THOC2Q8NI27 1593 aaKnown RBP16.71■□□□□ 0.27
PUM1-202ENST00000373741 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
PUM1-202ENST00000373741 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
PUM1-202ENST00000373741 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
PUM1-202ENST00000373741 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
PUM1-202ENST00000373741 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
PUM1-202ENST00000373741 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
PUM1-202ENST00000373741 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
PUM1-202ENST00000373741 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
PUM1-202ENST00000373741 PTPRGP23470 1445 aa16.67■□□□□ 0.26
PUM1-202ENST00000373741 RAB3GAP2Q9H2M9 1393 aa16.66■□□□□ 0.26
PUM1-202ENST00000373741 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
PUM1-202ENST00000373741 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
PUM1-202ENST00000373741 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
PUM1-202ENST00000373741 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.25
PUM1-202ENST00000373741 FOXD1Q16676 465 aa16.58■□□□□ 0.25
PUM1-202ENST00000373741 HIRIP3Q9BW71 556 aaPredicted RBP16.58■□□□□ 0.25
PUM1-202ENST00000373741 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
PUM1-202ENST00000373741 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
PUM1-202ENST00000373741 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
PUM1-202ENST00000373741 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
PUM1-202ENST00000373741 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
PUM1-202ENST00000373741 ZNF326Q5BKZ1 582 aaKnown RBP16.56■□□□□ 0.24
PUM1-202ENST00000373741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■□□□□ 10.4
PUM1-202ENST00000373741 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
PUM1-202ENST00000373741 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
PUM1-202ENST00000373741 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
PUM1-202ENST00000373741 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■■■□ 20.6
PUM1-202ENST00000373741 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
PUM1-202ENST00000373741 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
PUM1-202ENST00000373741 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
PUM1-202ENST00000373741 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
PUM1-202ENST00000373741 ANP32EQ9BTT0 268 aa16.51■□□□□ 0.23
PUM1-202ENST00000373741 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
PUM1-202ENST00000373741 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PUM1-202ENST00000373741 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
PUM1-202ENST00000373741 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
PUM1-202ENST00000373741 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
PUM1-202ENST00000373741 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
PUM1-202ENST00000373741 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
PUM1-202ENST00000373741 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
PUM1-202ENST00000373741 NUP160Q12769 1436 aa16.47■□□□□ 0.23
PUM1-202ENST00000373741 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
PUM1-202ENST00000373741 NUP153P49790 1475 aaKnown RBP16.47■□□□□ 0.23
PUM1-202ENST00000373741 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
PUM1-202ENST00000373741 MIER1Q8N108 512 aa16.45■□□□□ 0.22
PUM1-202ENST00000373741 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
PUM1-202ENST00000373741 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
PUM1-202ENST00000373741 BCANQ96GW7 911 aa16.43■□□□□ 0.22
PUM1-202ENST00000373741 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms