RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
PEF1-201ENST00000373703 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
PEF1-201ENST00000373703 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
PEF1-201ENST00000373703 JPH4Q96JJ6 628 aa24.14■■□□□ 1.46
PEF1-201ENST00000373703 IQGAP2Q13576 1575 aa24.11■■□□□ 1.45
PEF1-201ENST00000373703 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
PEF1-201ENST00000373703 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
PEF1-201ENST00000373703 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
PEF1-201ENST00000373703 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
PEF1-201ENST00000373703 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
PEF1-201ENST00000373703 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
PEF1-201ENST00000373703 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
PEF1-201ENST00000373703 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
PEF1-201ENST00000373703 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
PEF1-201ENST00000373703 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
PEF1-201ENST00000373703 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
PEF1-201ENST00000373703 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
PEF1-201ENST00000373703 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
PEF1-201ENST00000373703 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
PEF1-201ENST00000373703 P3H3Q8IVL6 736 aa23.9■■□□□ 1.42
PEF1-201ENST00000373703 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
PEF1-201ENST00000373703 KIAA0556O60303 1618 aa23.88■■□□□ 1.41
PEF1-201ENST00000373703 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
PEF1-201ENST00000373703 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
PEF1-201ENST00000373703 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
PEF1-201ENST00000373703 EFCAB5A4FU69 1503 aa23.81■■□□□ 1.4
PEF1-201ENST00000373703 PTPRGP23470 1445 aa23.81■■□□□ 1.4
PEF1-201ENST00000373703 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
PEF1-201ENST00000373703 CLIP1P30622 1438 aa23.78■■□□□ 1.4
PEF1-201ENST00000373703 FHOD3Q2V2M9 1422 aa23.78■■□□□ 1.4
PEF1-201ENST00000373703 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
PEF1-201ENST00000373703 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
PEF1-201ENST00000373703 UACAQ9BZF9 1416 aa23.64■■□□□ 1.38
PEF1-201ENST00000373703 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
PEF1-201ENST00000373703 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
PEF1-201ENST00000373703 ABCA8O94911 1581 aa23.59■■□□□ 1.37
PEF1-201ENST00000373703 ABCC2Q92887 1545 aa23.58■■□□□ 1.36
PEF1-201ENST00000373703 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
PEF1-201ENST00000373703 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
PEF1-201ENST00000373703 ATP1B4Q9UN42 357 aaPredicted RBP23.55■■□□□ 1.36
PEF1-201ENST00000373703 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
PEF1-201ENST00000373703 NPM1P06748 294 aaKnown RBP eCLIP23.52■■□□□ 1.36
PEF1-201ENST00000373703 NUP153P49790 1475 aaKnown RBP23.49■■□□□ 1.35
PEF1-201ENST00000373703 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
PEF1-201ENST00000373703 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
PEF1-201ENST00000373703 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
PEF1-201ENST00000373703 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.34
PEF1-201ENST00000373703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
PEF1-201ENST00000373703 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
PEF1-201ENST00000373703 ATP10BO94823 1461 aa23.44■■□□□ 1.34
PEF1-201ENST00000373703 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
PEF1-201ENST00000373703 ZCCHC11Q5TAX3 1644 aaKnown RBP23.42■■□□□ 1.34
PEF1-201ENST00000373703 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
PEF1-201ENST00000373703 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.34
PEF1-201ENST00000373703 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
PEF1-201ENST00000373703 LRRIQ1Q96JM4 1722 aa23.35■■□□□ 1.33
PEF1-201ENST00000373703 ASXL2Q76L83 1435 aa23.34■■□□□ 1.33
PEF1-201ENST00000373703 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
PEF1-201ENST00000373703 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
PEF1-201ENST00000373703 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
PEF1-201ENST00000373703 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
PEF1-201ENST00000373703 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
PEF1-201ENST00000373703 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
PEF1-201ENST00000373703 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
PEF1-201ENST00000373703 APLP2Q06481 763 aa23.23■■□□□ 1.31
PEF1-201ENST00000373703 ABCC10Q5T3U5 1492 aa23.22■■□□□ 1.31
PEF1-201ENST00000373703 FAM69CQ0P6D2 419 aa23.21■■□□□ 1.31
PEF1-201ENST00000373703 TIAM1Q13009 1591 aa23.2■■□□□ 1.3
PEF1-201ENST00000373703 MAGI3Q5TCQ9 1506 aa23.2■■□□□ 1.3
PEF1-201ENST00000373703 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
PEF1-201ENST00000373703 CFAP43Q8NDM7 1665 aa23.17■■□□□ 1.3
PEF1-201ENST00000373703 DIP2BQ9P265 1576 aa23.17■■□□□ 1.3
PEF1-201ENST00000373703 MTUS2Q5JR59 1369 aa23.16■■□□□ 1.3
PEF1-201ENST00000373703 MAP3K1Q13233 1512 aa23.15■■□□□ 1.3
PEF1-201ENST00000373703 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
PEF1-201ENST00000373703 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
PEF1-201ENST00000373703 GLI2P10070 1586 aa23.11■■□□□ 1.29
PEF1-201ENST00000373703 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
PEF1-201ENST00000373703 KIF14Q15058 1648 aa23.1■■□□□ 1.29
PEF1-201ENST00000373703 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
PEF1-201ENST00000373703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.28
PEF1-201ENST00000373703 ABCA9Q8IUA7 1624 aa23.05■■□□□ 1.28
PEF1-201ENST00000373703 PPARGC1BQ86YN6 1023 aaKnown RBP23.04■■□□□ 1.28
PEF1-201ENST00000373703 CD109Q6YHK3 1445 aa23.04■■□□□ 1.28
PEF1-201ENST00000373703 TTC37Q6PGP7 1564 aa23.03■■□□□ 1.28
PEF1-201ENST00000373703 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
PEF1-201ENST00000373703 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
PEF1-201ENST00000373703 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
PEF1-201ENST00000373703 SUPT6HQ7KZ85 1726 aaKnown RBP22.98■■□□□ 1.27
PEF1-201ENST00000373703 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
PEF1-201ENST00000373703 PLCH2O75038 1416 aa22.94■■□□□ 1.26
PEF1-201ENST00000373703 PPRC1Q5VV67 1664 aaKnown RBP22.93■■□□□ 1.26
PEF1-201ENST00000373703 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
PEF1-201ENST00000373703 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
PEF1-201ENST00000373703 TEX14Q8IWB6 1497 aa22.9■■□□□ 1.26
PEF1-201ENST00000373703 CDC42BPAQ5VT25 1732 aa22.89■■□□□ 1.25
PEF1-201ENST00000373703 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
PEF1-201ENST00000373703 CFDP1Q9UEE9 299 aaPredicted RBP22.88■■□□□ 1.25
PEF1-201ENST00000373703 FANCAO15360 1455 aa22.88■■□□□ 1.25
PEF1-201ENST00000373703 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms