RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 IGF1RP08069 1367 aa28.22■■■□□ 2.11
HDAC8-202ENST00000373556 CUL7Q14999 1698 aa28.19■■■□□ 2.1
HDAC8-202ENST00000373556 KIAA0586Q9BVV6 1533 aa28.11■■■□□ 2.09
HDAC8-202ENST00000373556 KIF13AQ9H1H9 1805 aa28.06■■■□□ 2.08
HDAC8-202ENST00000373556 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
HDAC8-202ENST00000373556 ADCY10Q96PN6 1610 aa28■■■□□ 2.07
HDAC8-202ENST00000373556 NPM1P06748 294 aaKnown RBP eCLIP27.94■■■□□ 2.06
HDAC8-202ENST00000373556 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
HDAC8-202ENST00000373556 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.05
HDAC8-202ENST00000373556 IQGAP2Q13576 1575 aa27.87■■■□□ 2.05
HDAC8-202ENST00000373556 FAM69CQ0P6D2 419 aa27.87■■■□□ 2.05
HDAC8-202ENST00000373556 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
HDAC8-202ENST00000373556 DIP2BQ9P265 1576 aa27.86■■■□□ 2.05
HDAC8-202ENST00000373556 PTPRGP23470 1445 aa27.84■■■□□ 2.05
HDAC8-202ENST00000373556 CARMIL2Q6F5E8 1435 aa27.82■■■□□ 2.04
HDAC8-202ENST00000373556 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
HDAC8-202ENST00000373556 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
HDAC8-202ENST00000373556 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
HDAC8-202ENST00000373556 DISP1Q96F81 1524 aa27.74■■■□□ 2.03
HDAC8-202ENST00000373556 TSPOAP1O95153 1857 aa27.71■■■□□ 2.03
HDAC8-202ENST00000373556 ABCC2Q92887 1545 aa27.7■■■□□ 2.02
HDAC8-202ENST00000373556 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
HDAC8-202ENST00000373556 UACAQ9BZF9 1416 aa27.64■■■□□ 2.02
HDAC8-202ENST00000373556 UHRF1BP1LA0JNW5 1464 aa27.64■■■□□ 2.01
HDAC8-202ENST00000373556 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
HDAC8-202ENST00000373556 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
HDAC8-202ENST00000373556 ASXL2Q76L83 1435 aa27.61■■■□□ 2.01
HDAC8-202ENST00000373556 KDM6BO15054 1643 aa27.6■■■□□ 2.01
HDAC8-202ENST00000373556 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
HDAC8-202ENST00000373556 KDM5BQ9UGL1 1544 aa27.52■■■□□ 2
HDAC8-202ENST00000373556 ZCCHC11Q5TAX3 1644 aaKnown RBP27.52■■■□□ 2
HDAC8-202ENST00000373556 GLI2P10070 1586 aa27.51■■□□□ 1.99
HDAC8-202ENST00000373556 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
HDAC8-202ENST00000373556 PPRC1Q5VV67 1664 aaKnown RBP27.5■■□□□ 1.99
HDAC8-202ENST00000373556 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
HDAC8-202ENST00000373556 EPRSP07814 1512 aaKnown RBP27.44■■□□□ 1.98
HDAC8-202ENST00000373556 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
HDAC8-202ENST00000373556 ABCA8O94911 1581 aa27.36■■□□□ 1.97
HDAC8-202ENST00000373556 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
HDAC8-202ENST00000373556 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
HDAC8-202ENST00000373556 KDM4FA0A1W2PPD8 638 aa27.29■■□□□ 1.96
HDAC8-202ENST00000373556 TEX14Q8IWB6 1497 aa27.28■■□□□ 1.96
HDAC8-202ENST00000373556 COL17A1Q9UMD9 1497 aaPredicted RBP27.28■■□□□ 1.96
HDAC8-202ENST00000373556 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
HDAC8-202ENST00000373556 KCNH8Q96L42 1107 aa27.23■■□□□ 1.95
HDAC8-202ENST00000373556 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
HDAC8-202ENST00000373556 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
HDAC8-202ENST00000373556 SAMD9Q5K651 1589 aa27.19■■□□□ 1.94
HDAC8-202ENST00000373556 CD109Q6YHK3 1445 aa27.16■■□□□ 1.94
HDAC8-202ENST00000373556 EEA1Q15075 1411 aa27.16■■□□□ 1.94
HDAC8-202ENST00000373556 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
HDAC8-202ENST00000373556 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
HDAC8-202ENST00000373556 ATP10BO94823 1461 aa27.13■■□□□ 1.93
HDAC8-202ENST00000373556 RANGAP1P46060 587 aaPredicted RBP27.12■■□□□ 1.93
HDAC8-202ENST00000373556 ADGRL1O94910 1474 aa27.11■■□□□ 1.93
HDAC8-202ENST00000373556 RAPGEF6Q8TEU7 1601 aa27.09■■□□□ 1.93
HDAC8-202ENST00000373556 FHOD3Q2V2M9 1422 aa27.03■■□□□ 1.92
HDAC8-202ENST00000373556 KIF21BO75037 1637 aa27■■□□□ 1.91
HDAC8-202ENST00000373556 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
HDAC8-202ENST00000373556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.99■■□□□ 1.91
HDAC8-202ENST00000373556 HNRNPUL2Q1KMD3 747 aaKnown RBP26.99■■□□□ 1.91
HDAC8-202ENST00000373556 NUP153P49790 1475 aaKnown RBP26.98■■□□□ 1.91
HDAC8-202ENST00000373556 ARAP3Q8WWN8 1544 aa26.92■■□□□ 1.9
HDAC8-202ENST00000373556 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
HDAC8-202ENST00000373556 EFCAB5A4FU69 1503 aa26.9■■□□□ 1.9
HDAC8-202ENST00000373556 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
HDAC8-202ENST00000373556 PHLDB1Q86UU1 1377 aa26.82■■□□□ 1.88
HDAC8-202ENST00000373556 NEO1Q92859 1461 aa26.81■■□□□ 1.88
HDAC8-202ENST00000373556 PLEKHD1A6NEE1 506 aa26.8■■□□□ 1.88
HDAC8-202ENST00000373556 RAPGEF3O95398 923 aa26.8■■□□□ 1.88
HDAC8-202ENST00000373556 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
HDAC8-202ENST00000373556 FRMPD1Q5SYB0 1578 aa26.75■■□□□ 1.87
HDAC8-202ENST00000373556 CDK13Q14004 1512 aaKnown RBP26.75■■□□□ 1.87
HDAC8-202ENST00000373556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.74■■□□□ 1.87
HDAC8-202ENST00000373556 HECW2Q9P2P5 1572 aa26.73■■□□□ 1.87
HDAC8-202ENST00000373556 TTC37Q6PGP7 1564 aa26.72■■□□□ 1.87
HDAC8-202ENST00000373556 ARHGAP35Q9NRY4 1499 aa26.69■■□□□ 1.86
HDAC8-202ENST00000373556 ATP1B4Q9UN42 357 aaPredicted RBP26.67■■□□□ 1.86
HDAC8-202ENST00000373556 FANCAO15360 1455 aa26.67■■□□□ 1.86
HDAC8-202ENST00000373556 AKNAQ7Z591 1439 aa26.66■■□□□ 1.86
HDAC8-202ENST00000373556 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
HDAC8-202ENST00000373556 HECW1Q76N89 1606 aa26.65■■□□□ 1.86
HDAC8-202ENST00000373556 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
HDAC8-202ENST00000373556 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
HDAC8-202ENST00000373556 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
HDAC8-202ENST00000373556 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
HDAC8-202ENST00000373556 ARHGEF40Q8TER5 1519 aa26.6■■□□□ 1.85
HDAC8-202ENST00000373556 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
HDAC8-202ENST00000373556 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
HDAC8-202ENST00000373556 PTPRMP28827 1452 aa26.55■■□□□ 1.84
HDAC8-202ENST00000373556 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
HDAC8-202ENST00000373556 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
HDAC8-202ENST00000373556 PLCH2O75038 1416 aa26.53■■□□□ 1.84
HDAC8-202ENST00000373556 KIF14Q15058 1648 aa26.52■■□□□ 1.84
HDAC8-202ENST00000373556 ZMYM4Q5VZL5 1548 aa26.52■■□□□ 1.84
HDAC8-202ENST00000373556 MYO5CQ9NQX4 1742 aa26.52■■□□□ 1.84
HDAC8-202ENST00000373556 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
HDAC8-202ENST00000373556 ZFYVE16Q7Z3T8 1539 aa26.49■■□□□ 1.83
HDAC8-202ENST00000373556 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
HDAC8-202ENST00000373556 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms