RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 IRX6P78412 446 aaPredicted RBP25.06■■□□□ 1.6
VPS26A-202ENST00000373382 SETD5Q9C0A6 1442 aa25.05■■□□□ 1.6
VPS26A-202ENST00000373382 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
VPS26A-202ENST00000373382 MAPKBP1O60336 1514 aa25■■□□□ 1.59
VPS26A-202ENST00000373382 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
VPS26A-202ENST00000373382 BCL11AQ9H165 835 aa24.99■■□□□ 1.59
VPS26A-202ENST00000373382 PHLDB1Q86UU1 1377 aa24.98■■□□□ 1.59
VPS26A-202ENST00000373382 CUX1P39880 1505 aa24.97■■□□□ 1.59
VPS26A-202ENST00000373382 CUX2O14529 1486 aa24.95■■□□□ 1.58
VPS26A-202ENST00000373382 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
VPS26A-202ENST00000373382 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
VPS26A-202ENST00000373382 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
VPS26A-202ENST00000373382 IGF1RP08069 1367 aa24.85■■□□□ 1.57
VPS26A-202ENST00000373382 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
VPS26A-202ENST00000373382 CCER2I3L3R5 266 aa24.84■■□□□ 1.57
VPS26A-202ENST00000373382 ERICH6Q7L0X2 663 aa24.83■■□□□ 1.57
VPS26A-202ENST00000373382 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
VPS26A-202ENST00000373382 TIAM1Q13009 1591 aa24.78■■□□□ 1.56
VPS26A-202ENST00000373382 CNGB1Q14028 1251 aaPredicted RBP24.77■■□□□ 1.56
VPS26A-202ENST00000373382 CDK11AQ9UQ88 783 aaPredicted RBP24.75■■□□□ 1.55
VPS26A-202ENST00000373382 MSH5O43196 834 aa24.74■■□□□ 1.55
VPS26A-202ENST00000373382 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
VPS26A-202ENST00000373382 TIMELESSQ9UNS1 1208 aa24.72■■□□□ 1.55
VPS26A-202ENST00000373382 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
VPS26A-202ENST00000373382 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
VPS26A-202ENST00000373382 FAM9BQ8IZU0 186 aa24.65■■□□□ 1.54
VPS26A-202ENST00000373382 CFTRP13569 1480 aa24.63■■□□□ 1.53
VPS26A-202ENST00000373382 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
VPS26A-202ENST00000373382 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
VPS26A-202ENST00000373382 MTUS2Q5JR59 1369 aa24.59■■□□□ 1.53
VPS26A-202ENST00000373382 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
VPS26A-202ENST00000373382 HSPA5P11021 654 aaKnown RBP24.57■■□□□ 1.52
VPS26A-202ENST00000373382 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
VPS26A-202ENST00000373382 ARID3CA6NKF2 412 aa24.56■■□□□ 1.52
VPS26A-202ENST00000373382 B4GALNT3Q6L9W6 998 aa24.56■■□□□ 1.52
VPS26A-202ENST00000373382 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
VPS26A-202ENST00000373382 PCF11O94913 1555 aaKnown RBP24.54■■□□□ 1.52
VPS26A-202ENST00000373382 CCDC18Q5T9S5 1454 aa24.52■■□□□ 1.52
VPS26A-202ENST00000373382 POLR3GLQ9BT43 218 aa24.51■■□□□ 1.51
VPS26A-202ENST00000373382 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
VPS26A-202ENST00000373382 FOXD1Q16676 465 aa24.5■■□□□ 1.51
VPS26A-202ENST00000373382 WASHC2AQ641Q2 1341 aa24.5■■□□□ 1.51
VPS26A-202ENST00000373382 MRS2Q9HD23 443 aa24.48■■□□□ 1.51
VPS26A-202ENST00000373382 FGD6Q6ZV73 1430 aa24.47■■□□□ 1.51
VPS26A-202ENST00000373382 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
VPS26A-202ENST00000373382 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
VPS26A-202ENST00000373382 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
VPS26A-202ENST00000373382 PPP4R2Q9NY27 417 aa24.43■■□□□ 1.5
VPS26A-202ENST00000373382 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
VPS26A-202ENST00000373382 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
VPS26A-202ENST00000373382 FANCIQ9NVI1 1328 aa24.41■■□□□ 1.5
VPS26A-202ENST00000373382 UACAQ9BZF9 1416 aa24.4■■□□□ 1.5
VPS26A-202ENST00000373382 NBR1Q14596 966 aa24.39■■□□□ 1.49
VPS26A-202ENST00000373382 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.49
VPS26A-202ENST00000373382 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
VPS26A-202ENST00000373382 CASKIN1Q8WXD9 1431 aa24.36■■□□□ 1.49
VPS26A-202ENST00000373382 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
VPS26A-202ENST00000373382 FYCO1Q9BQS8 1478 aa24.33■■□□□ 1.49
VPS26A-202ENST00000373382 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
VPS26A-202ENST00000373382 NAIPQ13075 1403 aa24.32■■□□□ 1.48
VPS26A-202ENST00000373382 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
VPS26A-202ENST00000373382 PRKRIP1Q9H875 184 aaPredicted RBP24.31■■□□□ 1.48
VPS26A-202ENST00000373382 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
VPS26A-202ENST00000373382 FMN1Q68DA7 1419 aa24.28■■□□□ 1.48
VPS26A-202ENST00000373382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.27■■□□□ 1.489e-8■□□□□ 9.9
VPS26A-202ENST00000373382 MPHOSPH9Q99550 1183 aa24.26■■□□□ 1.47
VPS26A-202ENST00000373382 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
VPS26A-202ENST00000373382 DEKP35659 375 aaKnown RBP24.24■■□□□ 1.47
VPS26A-202ENST00000373382 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
VPS26A-202ENST00000373382 PTPN23Q9H3S7 1636 aa24.23■■□□□ 1.47
VPS26A-202ENST00000373382 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
VPS26A-202ENST00000373382 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
VPS26A-202ENST00000373382 CNTLNQ9NXG0 1405 aa24.19■■□□□ 1.46
VPS26A-202ENST00000373382 NBPF8Q3BBV2 869 aa24.18■■□□□ 1.46
VPS26A-202ENST00000373382 CCDC136Q96JN2 1154 aa24.18■■□□□ 1.46
VPS26A-202ENST00000373382 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
VPS26A-202ENST00000373382 ERICH6BQ5W0A0 696 aa24.17■■□□□ 1.46
VPS26A-202ENST00000373382 CCDC7Q96M83 1385 aa24.17■■□□□ 1.46
VPS26A-202ENST00000373382 NOP58Q9Y2X3 529 aaKnown RBP24.16■■□□□ 1.46
VPS26A-202ENST00000373382 ZBED9Q6R2W3 1325 aa24.16■■□□□ 1.46
VPS26A-202ENST00000373382 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
VPS26A-202ENST00000373382 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
VPS26A-202ENST00000373382 EFCAB5A4FU69 1503 aa24.12■■□□□ 1.45
VPS26A-202ENST00000373382 KIF7Q2M1P5 1343 aa24.12■■□□□ 1.45
VPS26A-202ENST00000373382 SALL2Q9Y467 1007 aaPredicted RBP24.11■■□□□ 1.45
VPS26A-202ENST00000373382 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
VPS26A-202ENST00000373382 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
VPS26A-202ENST00000373382 KDM5BQ9UGL1 1544 aa24.09■■□□□ 1.45
VPS26A-202ENST00000373382 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
VPS26A-202ENST00000373382 NESP48681 1621 aa24.07■■□□□ 1.44
VPS26A-202ENST00000373382 ANP32AP39687 249 aaKnown RBP24.06■■□□□ 1.44
VPS26A-202ENST00000373382 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
VPS26A-202ENST00000373382 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
VPS26A-202ENST00000373382 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
VPS26A-202ENST00000373382 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
VPS26A-202ENST00000373382 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
VPS26A-202ENST00000373382 TMC1Q8TDI8 760 aa24■■□□□ 1.43
VPS26A-202ENST00000373382 ZBTB47Q9UFB7 747 aaPredicted RBP23.99■■□□□ 1.43
VPS26A-202ENST00000373382 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
VPS26A-202ENST00000373382 ZNF777Q9ULD5 760 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms