RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
CSMD2-203ENST00000373377 CUX2O14529 1486 aa14.1□□□□□ -0.15
CSMD2-203ENST00000373377 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
CSMD2-203ENST00000373377 IGF1RP08069 1367 aa14.09□□□□□ -0.15
CSMD2-203ENST00000373377 CUL7Q14999 1698 aa14.08□□□□□ -0.15
CSMD2-203ENST00000373377 DHX57Q6P158 1386 aaKnown RBP14.07□□□□□ -0.16
CSMD2-203ENST00000373377 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
CSMD2-203ENST00000373377 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
CSMD2-203ENST00000373377 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
CSMD2-203ENST00000373377 CTTNBP2Q8WZ74 1663 aa14.05□□□□□ -0.16
CSMD2-203ENST00000373377 DDX10Q13206 875 aaKnown RBP14.05□□□□□ -0.16
CSMD2-203ENST00000373377 FKBP8Q14318 412 aa14.04□□□□□ -0.16
CSMD2-203ENST00000373377 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
CSMD2-203ENST00000373377 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.17
CSMD2-203ENST00000373377 TRIM52Q96A61 297 aa14□□□□□ -0.17
CSMD2-203ENST00000373377 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
CSMD2-203ENST00000373377 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
CSMD2-203ENST00000373377 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
CSMD2-203ENST00000373377 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
CSMD2-203ENST00000373377 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
CSMD2-203ENST00000373377 PBRM1Q86U86 1689 aa13.96□□□□□ -0.18
CSMD2-203ENST00000373377 ANP32EQ9BTT0 268 aa13.95□□□□□ -0.18
CSMD2-203ENST00000373377 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
CSMD2-203ENST00000373377 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
CSMD2-203ENST00000373377 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
CSMD2-203ENST00000373377 NEFLP07196 543 aa13.94□□□□□ -0.18
CSMD2-203ENST00000373377 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
CSMD2-203ENST00000373377 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
CSMD2-203ENST00000373377 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
CSMD2-203ENST00000373377 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
CSMD2-203ENST00000373377 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
CSMD2-203ENST00000373377 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
CSMD2-203ENST00000373377 CCNB3Q8WWL7 1395 aa13.89□□□□□ -0.19
CSMD2-203ENST00000373377 WDR62O43379 1518 aa13.88□□□□□ -0.19
CSMD2-203ENST00000373377 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
CSMD2-203ENST00000373377 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
CSMD2-203ENST00000373377 RAB3GAP2Q9H2M9 1393 aa13.86□□□□□ -0.19
CSMD2-203ENST00000373377 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
CSMD2-203ENST00000373377 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
CSMD2-203ENST00000373377 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
CSMD2-203ENST00000373377 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSMD2-203ENST00000373377 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
CSMD2-203ENST00000373377 ANP32CO43423 234 aa13.82□□□□□ -0.2
CSMD2-203ENST00000373377 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
CSMD2-203ENST00000373377 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
CSMD2-203ENST00000373377 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
CSMD2-203ENST00000373377 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
CSMD2-203ENST00000373377 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
CSMD2-203ENST00000373377 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
CSMD2-203ENST00000373377 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
CSMD2-203ENST00000373377 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
CSMD2-203ENST00000373377 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
CSMD2-203ENST00000373377 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSMD2-203ENST00000373377 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
CSMD2-203ENST00000373377 ERICH6Q7L0X2 663 aa13.73□□□□□ -0.21
CSMD2-203ENST00000373377 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
CSMD2-203ENST00000373377 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
CSMD2-203ENST00000373377 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
CSMD2-203ENST00000373377 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.21
CSMD2-203ENST00000373377 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
CSMD2-203ENST00000373377 IQGAP2Q13576 1575 aa13.69□□□□□ -0.22
CSMD2-203ENST00000373377 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
CSMD2-203ENST00000373377 MAPKBP1O60336 1514 aa13.67□□□□□ -0.22
CSMD2-203ENST00000373377 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
CSMD2-203ENST00000373377 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
CSMD2-203ENST00000373377 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
CSMD2-203ENST00000373377 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
CSMD2-203ENST00000373377 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
CSMD2-203ENST00000373377 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
CSMD2-203ENST00000373377 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
CSMD2-203ENST00000373377 MAGI3Q5TCQ9 1506 aa13.62□□□□□ -0.23
CSMD2-203ENST00000373377 MSH5O43196 834 aa13.62□□□□□ -0.23
CSMD2-203ENST00000373377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSMD2-203ENST00000373377 KIAA0556O60303 1618 aa13.61□□□□□ -0.23
CSMD2-203ENST00000373377 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
CSMD2-203ENST00000373377 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
CSMD2-203ENST00000373377 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
CSMD2-203ENST00000373377 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
CSMD2-203ENST00000373377 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
CSMD2-203ENST00000373377 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
CSMD2-203ENST00000373377 ARID3CA6NKF2 412 aa13.58□□□□□ -0.23
CSMD2-203ENST00000373377 CEP170Q5SW79 1584 aa13.58□□□□□ -0.24
CSMD2-203ENST00000373377 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
CSMD2-203ENST00000373377 POLR3GLQ9BT43 218 aa13.57□□□□□ -0.24
CSMD2-203ENST00000373377 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
CSMD2-203ENST00000373377 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-203ENST00000373377 CCDC18Q5T9S5 1454 aa13.56□□□□□ -0.24
CSMD2-203ENST00000373377 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
CSMD2-203ENST00000373377 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
CSMD2-203ENST00000373377 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
CSMD2-203ENST00000373377 CCDC184Q52MB2 194 aa13.52□□□□□ -0.24
CSMD2-203ENST00000373377 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
CSMD2-203ENST00000373377 FOXD1Q16676 465 aa13.51□□□□□ -0.25
CSMD2-203ENST00000373377 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
CSMD2-203ENST00000373377 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
CSMD2-203ENST00000373377 EPRSP07814 1512 aaKnown RBP13.5□□□□□ -0.25
CSMD2-203ENST00000373377 NBR1Q14596 966 aa13.5□□□□□ -0.25
CSMD2-203ENST00000373377 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
CSMD2-203ENST00000373377 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
CSMD2-203ENST00000373377 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms