RNA–Protein interactions for RNA: ENST00000373257.7

LPIN3-201, Transcript of lipin 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LPIN3, Length 4,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN3-201ENST00000373257 MYT1Q01538 1121 aa16.81■□□□□ 0.28
LPIN3-201ENST00000373257 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
LPIN3-201ENST00000373257 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
LPIN3-201ENST00000373257 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
LPIN3-201ENST00000373257 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
LPIN3-201ENST00000373257 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
LPIN3-201ENST00000373257 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
LPIN3-201ENST00000373257 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
LPIN3-201ENST00000373257 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
LPIN3-201ENST00000373257 MIER1Q8N108 512 aa16.71■□□□□ 0.27
LPIN3-201ENST00000373257 ACIN1Q9UKV3 1341 aaKnown RBP16.71■□□□□ 0.27
LPIN3-201ENST00000373257 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
LPIN3-201ENST00000373257 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
LPIN3-201ENST00000373257 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
LPIN3-201ENST00000373257 FHAD1B1AJZ9 1412 aa16.69■□□□□ 0.26
LPIN3-201ENST00000373257 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
LPIN3-201ENST00000373257 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
LPIN3-201ENST00000373257 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
LPIN3-201ENST00000373257 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
LPIN3-201ENST00000373257 FHOD3Q2V2M9 1422 aa16.6■□□□□ 0.25
LPIN3-201ENST00000373257 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
LPIN3-201ENST00000373257 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
LPIN3-201ENST00000373257 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
LPIN3-201ENST00000373257 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
LPIN3-201ENST00000373257 DAXXQ9UER7 740 aaPredicted RBP16.54■□□□□ 0.24
LPIN3-201ENST00000373257 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
LPIN3-201ENST00000373257 FOXD1Q16676 465 aa16.53■□□□□ 0.24
LPIN3-201ENST00000373257 BCL11AQ9H165 835 aa16.52■□□□□ 0.23
LPIN3-201ENST00000373257 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
LPIN3-201ENST00000373257 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
LPIN3-201ENST00000373257 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
LPIN3-201ENST00000373257 IGF1RP08069 1367 aa16.5■□□□□ 0.23
LPIN3-201ENST00000373257 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
LPIN3-201ENST00000373257 JPH4Q96JJ6 628 aa16.49■□□□□ 0.23
LPIN3-201ENST00000373257 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
LPIN3-201ENST00000373257 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
LPIN3-201ENST00000373257 FKBP8Q14318 412 aa16.48■□□□□ 0.23
LPIN3-201ENST00000373257 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
LPIN3-201ENST00000373257 NESP48681 1621 aa16.46■□□□□ 0.23
LPIN3-201ENST00000373257 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
LPIN3-201ENST00000373257 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
LPIN3-201ENST00000373257 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
LPIN3-201ENST00000373257 SETD5Q9C0A6 1442 aa16.43■□□□□ 0.22
LPIN3-201ENST00000373257 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
LPIN3-201ENST00000373257 NEFMP07197 916 aa16.41■□□□□ 0.22
LPIN3-201ENST00000373257 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
LPIN3-201ENST00000373257 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
LPIN3-201ENST00000373257 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.214e-7■■■■■ 31.9
LPIN3-201ENST00000373257 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
LPIN3-201ENST00000373257 PKD2Q13563 968 aa16.37■□□□□ 0.21
LPIN3-201ENST00000373257 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
LPIN3-201ENST00000373257 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
LPIN3-201ENST00000373257 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
LPIN3-201ENST00000373257 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
LPIN3-201ENST00000373257 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.21
LPIN3-201ENST00000373257 CFTRP13569 1480 aa16.36■□□□□ 0.21
LPIN3-201ENST00000373257 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
LPIN3-201ENST00000373257 MLECQ14165 292 aa16.35■□□□□ 0.21
LPIN3-201ENST00000373257 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
LPIN3-201ENST00000373257 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
LPIN3-201ENST00000373257 GGT6Q6P531 493 aa16.33■□□□□ 0.21
LPIN3-201ENST00000373257 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
LPIN3-201ENST00000373257 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
LPIN3-201ENST00000373257 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
LPIN3-201ENST00000373257 NUP155O75694 1391 aa16.28■□□□□ 0.2
LPIN3-201ENST00000373257 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
LPIN3-201ENST00000373257 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
LPIN3-201ENST00000373257 PTPRGP23470 1445 aa16.23■□□□□ 0.19
LPIN3-201ENST00000373257 CUX1P39880 1505 aa16.22■□□□□ 0.19
LPIN3-201ENST00000373257 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
LPIN3-201ENST00000373257 KIF21BO75037 1637 aa16.21■□□□□ 0.19
LPIN3-201ENST00000373257 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
LPIN3-201ENST00000373257 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
LPIN3-201ENST00000373257 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
LPIN3-201ENST00000373257 KIF3BO15066 747 aa16.21■□□□□ 0.18
LPIN3-201ENST00000373257 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.18
LPIN3-201ENST00000373257 CCDC18Q5T9S5 1454 aa16.21■□□□□ 0.18
LPIN3-201ENST00000373257 HMGXB3Q12766 1538 aa16.21■□□□□ 0.18
LPIN3-201ENST00000373257 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
LPIN3-201ENST00000373257 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
LPIN3-201ENST00000373257 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
LPIN3-201ENST00000373257 CC2D1BQ5T0F9 858 aaKnown RBP16.19■□□□□ 0.18
LPIN3-201ENST00000373257 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
LPIN3-201ENST00000373257 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
LPIN3-201ENST00000373257 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
LPIN3-201ENST00000373257 PPM1GO15355 546 aaPredicted RBP16.18■□□□□ 0.18
LPIN3-201ENST00000373257 NPM2Q86SE8 214 aaKnown RBP16.18■□□□□ 0.18
LPIN3-201ENST00000373257 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
LPIN3-201ENST00000373257 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
LPIN3-201ENST00000373257 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
LPIN3-201ENST00000373257 CCDC136Q96JN2 1154 aa16.16■□□□□ 0.18
LPIN3-201ENST00000373257 PHLDB1Q86UU1 1377 aa16.16■□□□□ 0.18
LPIN3-201ENST00000373257 POGKQ9P215 609 aa16.15■□□□□ 0.18
LPIN3-201ENST00000373257 KANK1Q14678 1352 aa16.15■□□□□ 0.18
LPIN3-201ENST00000373257 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
LPIN3-201ENST00000373257 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
LPIN3-201ENST00000373257 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
LPIN3-201ENST00000373257 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
LPIN3-201ENST00000373257 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
LPIN3-201ENST00000373257 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms