RNA–Protein interactions for RNA: ENST00000373040.4

RPA4-201, Transcript of replication protein A4, humanhuman

APPRIS P1 BASIC

Gene RPA4, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA4-201ENST00000373040 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
RPA4-201ENST00000373040 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
RPA4-201ENST00000373040 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
RPA4-201ENST00000373040 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
RPA4-201ENST00000373040 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
RPA4-201ENST00000373040 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
RPA4-201ENST00000373040 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
RPA4-201ENST00000373040 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
RPA4-201ENST00000373040 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.38
RPA4-201ENST00000373040 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
RPA4-201ENST00000373040 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
RPA4-201ENST00000373040 CLIP1P30622 1438 aa17.36■□□□□ 0.37
RPA4-201ENST00000373040 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
RPA4-201ENST00000373040 P3H3Q8IVL6 736 aa17.36■□□□□ 0.37
RPA4-201ENST00000373040 DISP1Q96F81 1524 aa17.33■□□□□ 0.37
RPA4-201ENST00000373040 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.37
RPA4-201ENST00000373040 SAMD9Q5K651 1589 aa17.33■□□□□ 0.36
RPA4-201ENST00000373040 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
RPA4-201ENST00000373040 EFCAB5A4FU69 1503 aa17.31■□□□□ 0.36
RPA4-201ENST00000373040 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
RPA4-201ENST00000373040 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
RPA4-201ENST00000373040 FHOD3Q2V2M9 1422 aa17.27■□□□□ 0.35
RPA4-201ENST00000373040 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
RPA4-201ENST00000373040 TTBK1Q5TCY1 1321 aaPredicted RBP17.25■□□□□ 0.35
RPA4-201ENST00000373040 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
RPA4-201ENST00000373040 PTPRGP23470 1445 aa17.22■□□□□ 0.35
RPA4-201ENST00000373040 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
RPA4-201ENST00000373040 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
RPA4-201ENST00000373040 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
RPA4-201ENST00000373040 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
RPA4-201ENST00000373040 FMN1Q68DA7 1419 aa17.17■□□□□ 0.34
RPA4-201ENST00000373040 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
RPA4-201ENST00000373040 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
RPA4-201ENST00000373040 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
RPA4-201ENST00000373040 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
RPA4-201ENST00000373040 ABCA8O94911 1581 aa17.1■□□□□ 0.33
RPA4-201ENST00000373040 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
RPA4-201ENST00000373040 UACAQ9BZF9 1416 aa17.09■□□□□ 0.33
RPA4-201ENST00000373040 RAPGEF6Q8TEU7 1601 aa17.09■□□□□ 0.33
RPA4-201ENST00000373040 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
RPA4-201ENST00000373040 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
RPA4-201ENST00000373040 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
RPA4-201ENST00000373040 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
RPA4-201ENST00000373040 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
RPA4-201ENST00000373040 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
RPA4-201ENST00000373040 ARID3CA6NKF2 412 aa17.02■□□□□ 0.32
RPA4-201ENST00000373040 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
RPA4-201ENST00000373040 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
RPA4-201ENST00000373040 EPRSP07814 1512 aaKnown RBP16.99■□□□□ 0.31
RPA4-201ENST00000373040 APLP2Q06481 763 aa16.99■□□□□ 0.31
RPA4-201ENST00000373040 ATP10BO94823 1461 aa16.99■□□□□ 0.31
RPA4-201ENST00000373040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
RPA4-201ENST00000373040 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
RPA4-201ENST00000373040 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
RPA4-201ENST00000373040 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
RPA4-201ENST00000373040 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
RPA4-201ENST00000373040 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
RPA4-201ENST00000373040 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
RPA4-201ENST00000373040 ZCCHC11Q5TAX3 1644 aaKnown RBP16.93■□□□□ 0.3
RPA4-201ENST00000373040 TIAM1Q13009 1591 aa16.93■□□□□ 0.3
RPA4-201ENST00000373040 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
RPA4-201ENST00000373040 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
RPA4-201ENST00000373040 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
RPA4-201ENST00000373040 CFAP43Q8NDM7 1665 aa16.9■□□□□ 0.3
RPA4-201ENST00000373040 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
RPA4-201ENST00000373040 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
RPA4-201ENST00000373040 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
RPA4-201ENST00000373040 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
RPA4-201ENST00000373040 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
RPA4-201ENST00000373040 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
RPA4-201ENST00000373040 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
RPA4-201ENST00000373040 MAPKBP1O60336 1514 aa16.81■□□□□ 0.28
RPA4-201ENST00000373040 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
RPA4-201ENST00000373040 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
RPA4-201ENST00000373040 KIF14Q15058 1648 aa16.76■□□□□ 0.27
RPA4-201ENST00000373040 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
RPA4-201ENST00000373040 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
RPA4-201ENST00000373040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPA4-201ENST00000373040 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
RPA4-201ENST00000373040 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
RPA4-201ENST00000373040 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
RPA4-201ENST00000373040 PHLDB1Q86UU1 1377 aa16.68■□□□□ 0.26
RPA4-201ENST00000373040 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
RPA4-201ENST00000373040 GLI2P10070 1586 aa16.67■□□□□ 0.26
RPA4-201ENST00000373040 TTC37Q6PGP7 1564 aa16.67■□□□□ 0.26
RPA4-201ENST00000373040 DIP2BQ9P265 1576 aa16.67■□□□□ 0.26
RPA4-201ENST00000373040 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
RPA4-201ENST00000373040 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.26
RPA4-201ENST00000373040 CDC42BPAQ5VT25 1732 aa16.64■□□□□ 0.25
RPA4-201ENST00000373040 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
RPA4-201ENST00000373040 CD109Q6YHK3 1445 aa16.64■□□□□ 0.25
RPA4-201ENST00000373040 PLCH2O75038 1416 aa16.63■□□□□ 0.25
RPA4-201ENST00000373040 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
RPA4-201ENST00000373040 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
RPA4-201ENST00000373040 CFDP1Q9UEE9 299 aaPredicted RBP16.62■□□□□ 0.25
RPA4-201ENST00000373040 CDC42BPBQ9Y5S2 1711 aa16.62■□□□□ 0.25
RPA4-201ENST00000373040 MAP3K4Q9Y6R4 1608 aa16.61■□□□□ 0.25
RPA4-201ENST00000373040 ITSN2Q9NZM3 1697 aa16.61■□□□□ 0.25
RPA4-201ENST00000373040 PREX2Q70Z35 1606 aa16.6■□□□□ 0.25
RPA4-201ENST00000373040 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms