RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
SNX21-203ENST00000372541 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
SNX21-203ENST00000372541 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
SNX21-203ENST00000372541 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
SNX21-203ENST00000372541 EEA1Q15075 1411 aa25.11■■□□□ 1.61
SNX21-203ENST00000372541 KIAA0586Q9BVV6 1533 aa25.09■■□□□ 1.61
SNX21-203ENST00000372541 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
SNX21-203ENST00000372541 JPH4Q96JJ6 628 aa25.03■■□□□ 1.6
SNX21-203ENST00000372541 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
SNX21-203ENST00000372541 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
SNX21-203ENST00000372541 IQGAP2Q13576 1575 aa24.98■■□□□ 1.59
SNX21-203ENST00000372541 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
SNX21-203ENST00000372541 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
SNX21-203ENST00000372541 FAM69CQ0P6D2 419 aa24.91■■□□□ 1.58
SNX21-203ENST00000372541 CTTNBP2Q8WZ74 1663 aa24.9■■□□□ 1.58
SNX21-203ENST00000372541 ABCC10Q5T3U5 1492 aa24.89■■□□□ 1.58
SNX21-203ENST00000372541 NPM1P06748 294 aaKnown RBP eCLIP24.87■■□□□ 1.57
SNX21-203ENST00000372541 CARMIL2Q6F5E8 1435 aa24.85■■□□□ 1.57
SNX21-203ENST00000372541 KIF21BO75037 1637 aa24.84■■□□□ 1.57
SNX21-203ENST00000372541 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
SNX21-203ENST00000372541 MAPKBP1O60336 1514 aa24.82■■□□□ 1.56
SNX21-203ENST00000372541 DISP1Q96F81 1524 aa24.78■■□□□ 1.56
SNX21-203ENST00000372541 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
SNX21-203ENST00000372541 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
SNX21-203ENST00000372541 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
SNX21-203ENST00000372541 ADCY10Q96PN6 1610 aa24.74■■□□□ 1.55
SNX21-203ENST00000372541 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
SNX21-203ENST00000372541 PTPRGP23470 1445 aa24.71■■□□□ 1.55
SNX21-203ENST00000372541 KDM4FA0A1W2PPD8 638 aa24.71■■□□□ 1.55
SNX21-203ENST00000372541 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
SNX21-203ENST00000372541 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
SNX21-203ENST00000372541 KDM6BO15054 1643 aa24.63■■□□□ 1.53
SNX21-203ENST00000372541 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
SNX21-203ENST00000372541 SAMD9Q5K651 1589 aa24.59■■□□□ 1.53
SNX21-203ENST00000372541 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
SNX21-203ENST00000372541 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
SNX21-203ENST00000372541 UHRF1BP1LA0JNW5 1464 aa24.53■■□□□ 1.52
SNX21-203ENST00000372541 ABCC2Q92887 1545 aa24.53■■□□□ 1.52
SNX21-203ENST00000372541 EFCAB5A4FU69 1503 aa24.51■■□□□ 1.51
SNX21-203ENST00000372541 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
SNX21-203ENST00000372541 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
SNX21-203ENST00000372541 PLB1Q6P1J6 1458 aa24.47■■□□□ 1.51
SNX21-203ENST00000372541 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.51
SNX21-203ENST00000372541 ASXL2Q76L83 1435 aa24.45■■□□□ 1.51
SNX21-203ENST00000372541 ABCA8O94911 1581 aa24.45■■□□□ 1.5
SNX21-203ENST00000372541 GLI2P10070 1586 aa24.43■■□□□ 1.5
SNX21-203ENST00000372541 KDM5BQ9UGL1 1544 aa24.41■■□□□ 1.5
SNX21-203ENST00000372541 ILDR1Q86SU0 546 aaPredicted RBP24.38■■□□□ 1.49
SNX21-203ENST00000372541 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
SNX21-203ENST00000372541 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
SNX21-203ENST00000372541 ZCCHC11Q5TAX3 1644 aaKnown RBP24.36■■□□□ 1.49
SNX21-203ENST00000372541 COL17A1Q9UMD9 1497 aaPredicted RBP24.35■■□□□ 1.49
SNX21-203ENST00000372541 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
SNX21-203ENST00000372541 ADGRL1O94910 1474 aa24.32■■□□□ 1.48
SNX21-203ENST00000372541 EPRSP07814 1512 aaKnown RBP24.31■■□□□ 1.48
SNX21-203ENST00000372541 FMN1Q68DA7 1419 aa24.27■■□□□ 1.48
SNX21-203ENST00000372541 CLIP1P30622 1438 aa24.26■■□□□ 1.47
SNX21-203ENST00000372541 NUP153P49790 1475 aaKnown RBP24.25■■□□□ 1.47
SNX21-203ENST00000372541 ARID3CA6NKF2 412 aa24.24■■□□□ 1.47
SNX21-203ENST00000372541 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
SNX21-203ENST00000372541 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
SNX21-203ENST00000372541 MAP3K4Q9Y6R4 1608 aa24.23■■□□□ 1.47
SNX21-203ENST00000372541 ATP10BO94823 1461 aa24.22■■□□□ 1.47
SNX21-203ENST00000372541 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
SNX21-203ENST00000372541 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
SNX21-203ENST00000372541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
SNX21-203ENST00000372541 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
SNX21-203ENST00000372541 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
SNX21-203ENST00000372541 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
SNX21-203ENST00000372541 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
SNX21-203ENST00000372541 HECW2Q9P2P5 1572 aa24.1■■□□□ 1.45
SNX21-203ENST00000372541 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
SNX21-203ENST00000372541 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
SNX21-203ENST00000372541 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
SNX21-203ENST00000372541 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
SNX21-203ENST00000372541 CD109Q6YHK3 1445 aa24.06■■□□□ 1.44
SNX21-203ENST00000372541 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
SNX21-203ENST00000372541 PLEKHD1A6NEE1 506 aa24.03■■□□□ 1.44
SNX21-203ENST00000372541 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
SNX21-203ENST00000372541 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
SNX21-203ENST00000372541 ABCA9Q8IUA7 1624 aa23.98■■□□□ 1.43
SNX21-203ENST00000372541 LRRIQ1Q96JM4 1722 aa23.98■■□□□ 1.43
SNX21-203ENST00000372541 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
SNX21-203ENST00000372541 TROQ12816 1431 aaPredicted RBP23.9■■□□□ 1.42
SNX21-203ENST00000372541 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.42
SNX21-203ENST00000372541 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
SNX21-203ENST00000372541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.88■■□□□ 1.41
SNX21-203ENST00000372541 KIF14Q15058 1648 aa23.87■■□□□ 1.41
SNX21-203ENST00000372541 TTC37Q6PGP7 1564 aa23.86■■□□□ 1.41
SNX21-203ENST00000372541 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
SNX21-203ENST00000372541 FBXO41Q8TF61 875 aa23.79■■□□□ 1.4
SNX21-203ENST00000372541 NEO1Q92859 1461 aa23.78■■□□□ 1.4
SNX21-203ENST00000372541 RAPGEF3O95398 923 aa23.76■■□□□ 1.39
SNX21-203ENST00000372541 CFAP74Q9C0B2 1584 aa23.76■■□□□ 1.39
SNX21-203ENST00000372541 PTPRMP28827 1452 aa23.75■■□□□ 1.39
SNX21-203ENST00000372541 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
SNX21-203ENST00000372541 FANCAO15360 1455 aa23.75■■□□□ 1.39
SNX21-203ENST00000372541 PLCH2O75038 1416 aa23.74■■□□□ 1.39
SNX21-203ENST00000372541 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
SNX21-203ENST00000372541 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms