RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.78
TMEM53-201ENST00000372235 RUSC2Q8N2Y8 1516 aa32.42■■■□□ 2.78
TMEM53-201ENST00000372235 KIAA0586Q9BVV6 1533 aa32.4■■■□□ 2.78
TMEM53-201ENST00000372235 CARMIL1Q5VZK9 1371 aa32.39■■■□□ 2.78
TMEM53-201ENST00000372235 NPM1P06748 294 aaKnown RBP eCLIP32.18■■■□□ 2.74
TMEM53-201ENST00000372235 RAPGEF2Q9Y4G8 1499 aa32.15■■■□□ 2.74
TMEM53-201ENST00000372235 CARMIL2Q6F5E8 1435 aa32.14■■■□□ 2.74
TMEM53-201ENST00000372235 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
TMEM53-201ENST00000372235 PTPRGP23470 1445 aa32.03■■■□□ 2.72
TMEM53-201ENST00000372235 TNIKQ9UKE5 1360 aa32.02■■■□□ 2.72
TMEM53-201ENST00000372235 MAPKBP1O60336 1514 aa31.97■■■□□ 2.71
TMEM53-201ENST00000372235 ADCY10Q96PN6 1610 aa31.96■■■□□ 2.71
TMEM53-201ENST00000372235 UGGT2Q9NYU1 1516 aa31.91■■■□□ 2.7
TMEM53-201ENST00000372235 ABCC10Q5T3U5 1492 aa31.89■■■□□ 2.7
TMEM53-201ENST00000372235 DISP1Q96F81 1524 aa31.85■■■□□ 2.69
TMEM53-201ENST00000372235 PRXQ9BXM0 1461 aa31.85■■■□□ 2.69
TMEM53-201ENST00000372235 FAM69CQ0P6D2 419 aa31.85■■■□□ 2.69
TMEM53-201ENST00000372235 KIF13AQ9H1H9 1805 aa31.84■■■□□ 2.69
TMEM53-201ENST00000372235 TTBK1Q5TCY1 1321 aaPredicted RBP31.82■■■□□ 2.68
TMEM53-201ENST00000372235 UHRF1BP1LA0JNW5 1464 aa31.81■■■□□ 2.68
TMEM53-201ENST00000372235 ABCC2Q92887 1545 aa31.8■■■□□ 2.68
TMEM53-201ENST00000372235 UACAQ9BZF9 1416 aa31.8■■■□□ 2.68
TMEM53-201ENST00000372235 CTTNBP2Q8WZ74 1663 aa31.8■■■□□ 2.68
TMEM53-201ENST00000372235 GOLGA3Q08378 1498 aa31.79■■■□□ 2.68
TMEM53-201ENST00000372235 EEA1Q15075 1411 aa31.76■■■□□ 2.68
TMEM53-201ENST00000372235 KIAA0556O60303 1618 aa31.76■■■□□ 2.67
TMEM53-201ENST00000372235 DIP2BQ9P265 1576 aa31.75■■■□□ 2.67
TMEM53-201ENST00000372235 CSRNP3Q8WYN3 585 aa31.74■■■□□ 2.67
TMEM53-201ENST00000372235 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
TMEM53-201ENST00000372235 PLB1Q6P1J6 1458 aa31.71■■■□□ 2.67
TMEM53-201ENST00000372235 ASXL2Q76L83 1435 aa31.63■■■□□ 2.65
TMEM53-201ENST00000372235 KDM5BQ9UGL1 1544 aa31.63■■■□□ 2.65
TMEM53-201ENST00000372235 GLI2P10070 1586 aa31.55■■■□□ 2.64
TMEM53-201ENST00000372235 ZCCHC11Q5TAX3 1644 aaKnown RBP31.49■■■□□ 2.63
TMEM53-201ENST00000372235 ABCA8O94911 1581 aa31.45■■■□□ 2.63
TMEM53-201ENST00000372235 AEBP2Q6ZN18 517 aaPredicted RBP31.45■■■□□ 2.63
TMEM53-201ENST00000372235 TSPOAP1O95153 1857 aa31.44■■■□□ 2.62
TMEM53-201ENST00000372235 EPRSP07814 1512 aaKnown RBP31.44■■■□□ 2.62
TMEM53-201ENST00000372235 KDM6BO15054 1643 aa31.43■■■□□ 2.62
TMEM53-201ENST00000372235 WDR7Q9Y4E6 1490 aa31.4■■■□□ 2.62
TMEM53-201ENST00000372235 SAMD9Q5K651 1589 aa31.36■■■□□ 2.61
TMEM53-201ENST00000372235 TEX14Q8IWB6 1497 aa31.36■■■□□ 2.61
TMEM53-201ENST00000372235 KIF21BO75037 1637 aa31.35■■■□□ 2.61
TMEM53-201ENST00000372235 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
TMEM53-201ENST00000372235 P3H3Q8IVL6 736 aa31.34■■■□□ 2.61
TMEM53-201ENST00000372235 MAP3K4Q9Y6R4 1608 aa31.32■■■□□ 2.6
TMEM53-201ENST00000372235 PPRC1Q5VV67 1664 aaKnown RBP31.26■■■□□ 2.6
TMEM53-201ENST00000372235 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
TMEM53-201ENST00000372235 KCNH8Q96L42 1107 aa31.21■■■□□ 2.59
TMEM53-201ENST00000372235 ATP10BO94823 1461 aa31.2■■■□□ 2.58
TMEM53-201ENST00000372235 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.58
TMEM53-201ENST00000372235 CFAP43Q8NDM7 1665 aa31.19■■■□□ 2.58
TMEM53-201ENST00000372235 CD109Q6YHK3 1445 aa31.19■■■□□ 2.58
TMEM53-201ENST00000372235 RANGAP1P46060 587 aaPredicted RBP31.18■■■□□ 2.58
TMEM53-201ENST00000372235 MAGI3Q5TCQ9 1506 aa31.17■■■□□ 2.58
TMEM53-201ENST00000372235 UBTFP17480 764 aaKnown RBP31.15■■■□□ 2.58
TMEM53-201ENST00000372235 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
TMEM53-201ENST00000372235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.12■■■□□ 2.57
TMEM53-201ENST00000372235 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
TMEM53-201ENST00000372235 ARID3CA6NKF2 412 aa31.09■■■□□ 2.57
TMEM53-201ENST00000372235 NUP153P49790 1475 aaKnown RBP31.05■■■□□ 2.56
TMEM53-201ENST00000372235 PHLDB1Q86UU1 1377 aa31.04■■■□□ 2.56
TMEM53-201ENST00000372235 COL17A1Q9UMD9 1497 aaPredicted RBP31.02■■■□□ 2.56
TMEM53-201ENST00000372235 PLEKHD1A6NEE1 506 aa31.01■■■□□ 2.55
TMEM53-201ENST00000372235 ABCA9Q8IUA7 1624 aa30.99■■■□□ 2.55
TMEM53-201ENST00000372235 FMN1Q68DA7 1419 aa30.98■■■□□ 2.55
TMEM53-201ENST00000372235 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
TMEM53-201ENST00000372235 ARAP3Q8WWN8 1544 aa30.92■■■□□ 2.54
TMEM53-201ENST00000372235 KDM4FA0A1W2PPD8 638 aa30.91■■■□□ 2.54
TMEM53-201ENST00000372235 NEO1Q92859 1461 aa30.89■■■□□ 2.53
TMEM53-201ENST00000372235 ARHGAP35Q9NRY4 1499 aa30.86■■■□□ 2.53
TMEM53-201ENST00000372235 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
TMEM53-201ENST00000372235 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
TMEM53-201ENST00000372235 ADGRL1O94910 1474 aa30.78■■■□□ 2.52
TMEM53-201ENST00000372235 ATP1B4Q9UN42 357 aaPredicted RBP30.78■■■□□ 2.52
TMEM53-201ENST00000372235 CFAP74Q9C0B2 1584 aa30.73■■■□□ 2.51
TMEM53-201ENST00000372235 CDK13Q14004 1512 aaKnown RBP30.73■■■□□ 2.51
TMEM53-201ENST00000372235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.72■■■□□ 2.51
TMEM53-201ENST00000372235 FANCAO15360 1455 aa30.68■■■□□ 2.5
TMEM53-201ENST00000372235 AKNAQ7Z591 1439 aa30.65■■■□□ 2.5
TMEM53-201ENST00000372235 RAPGEF3O95398 923 aa30.65■■■□□ 2.5
TMEM53-201ENST00000372235 CLIP1P30622 1438 aa30.64■■■□□ 2.49
TMEM53-201ENST00000372235 DENND4BO75064 1496 aaPredicted RBP30.63■■■□□ 2.49
TMEM53-201ENST00000372235 TTC37Q6PGP7 1564 aa30.62■■■□□ 2.49
TMEM53-201ENST00000372235 PLCH2O75038 1416 aa30.61■■■□□ 2.49
TMEM53-201ENST00000372235 CCDC18Q5T9S5 1454 aa30.6■■■□□ 2.49
TMEM53-201ENST00000372235 CASKIN1Q8WXD9 1431 aa30.6■■■□□ 2.49
TMEM53-201ENST00000372235 TROQ12816 1431 aaPredicted RBP30.59■■■□□ 2.49
TMEM53-201ENST00000372235 KIF14Q15058 1648 aa30.56■■■□□ 2.48
TMEM53-201ENST00000372235 EFCAB2Q5VUJ9 269 aa30.54■■■□□ 2.48
TMEM53-201ENST00000372235 FRMPD1Q5SYB0 1578 aa30.53■■■□□ 2.48
TMEM53-201ENST00000372235 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
TMEM53-201ENST00000372235 MYO5CQ9NQX4 1742 aa30.5■■■□□ 2.47
TMEM53-201ENST00000372235 MAGI2Q86UL8 1455 aa30.5■■■□□ 2.47
TMEM53-201ENST00000372235 RICTORQ6R327 1708 aa30.49■■■□□ 2.47
TMEM53-201ENST00000372235 PCF11O94913 1555 aaKnown RBP30.48■■■□□ 2.47
TMEM53-201ENST00000372235 ZMYM4Q5VZL5 1548 aa30.46■■■□□ 2.47
TMEM53-201ENST00000372235 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
TMEM53-201ENST00000372235 ARHGEF40Q8TER5 1519 aa30.44■■■□□ 2.46
TMEM53-201ENST00000372235 ARID4BQ4LE39 1312 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms