RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 GRIN2AQ12879 1464 aa28.77■■■□□ 2.2
CCDC17-201ENST00000372044 SYNJ2O15056 1496 aa28.75■■■□□ 2.19
CCDC17-201ENST00000372044 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
CCDC17-201ENST00000372044 IQGAP2Q13576 1575 aa28.68■■■□□ 2.18
CCDC17-201ENST00000372044 CHD1O14646 1710 aa28.68■■■□□ 2.18
CCDC17-201ENST00000372044 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
CCDC17-201ENST00000372044 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
CCDC17-201ENST00000372044 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
CCDC17-201ENST00000372044 SAMD9Q5K651 1589 aa28.64■■■□□ 2.18
CCDC17-201ENST00000372044 EFCAB5A4FU69 1503 aa28.64■■■□□ 2.17
CCDC17-201ENST00000372044 FBLN2P98095 1184 aa28.63■■■□□ 2.17
CCDC17-201ENST00000372044 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
CCDC17-201ENST00000372044 FHOD3Q2V2M9 1422 aa28.58■■■□□ 2.17
CCDC17-201ENST00000372044 KIAA0586Q9BVV6 1533 aa28.56■■■□□ 2.16
CCDC17-201ENST00000372044 NUP160Q12769 1436 aa28.55■■■□□ 2.16
CCDC17-201ENST00000372044 UGGT2Q9NYU1 1516 aa28.51■■■□□ 2.15
CCDC17-201ENST00000372044 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
CCDC17-201ENST00000372044 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
CCDC17-201ENST00000372044 PCGF6Q9BYE7 350 aa28.42■■■□□ 2.14
CCDC17-201ENST00000372044 KIAA0556O60303 1618 aa28.41■■■□□ 2.14
CCDC17-201ENST00000372044 DISP1Q96F81 1524 aa28.41■■■□□ 2.14
CCDC17-201ENST00000372044 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
CCDC17-201ENST00000372044 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
CCDC17-201ENST00000372044 FMN1Q68DA7 1419 aa28.33■■■□□ 2.13
CCDC17-201ENST00000372044 APLP2Q06481 763 aa28.32■■■□□ 2.12
CCDC17-201ENST00000372044 CFAP43Q8NDM7 1665 aa28.31■■■□□ 2.12
CCDC17-201ENST00000372044 FYCO1Q9BQS8 1478 aa28.31■■■□□ 2.12
CCDC17-201ENST00000372044 TIAM1Q13009 1591 aa28.31■■■□□ 2.12
CCDC17-201ENST00000372044 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
CCDC17-201ENST00000372044 JPH4Q96JJ6 628 aa28.28■■■□□ 2.12
CCDC17-201ENST00000372044 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
CCDC17-201ENST00000372044 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
CCDC17-201ENST00000372044 MAP3K1Q13233 1512 aa28.22■■■□□ 2.11
CCDC17-201ENST00000372044 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
CCDC17-201ENST00000372044 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
CCDC17-201ENST00000372044 CARMIL2Q6F5E8 1435 aa28.15■■■□□ 2.1
CCDC17-201ENST00000372044 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
CCDC17-201ENST00000372044 PRG4Q92954 1404 aaPredicted RBP28.15■■■□□ 2.1
CCDC17-201ENST00000372044 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
CCDC17-201ENST00000372044 LRRC9Q6ZRR7 1453 aa28.13■■■□□ 2.09
CCDC17-201ENST00000372044 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
CCDC17-201ENST00000372044 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
CCDC17-201ENST00000372044 CDK13Q14004 1512 aaKnown RBP28.05■■■□□ 2.08
CCDC17-201ENST00000372044 EPRSP07814 1512 aaKnown RBP28.04■■■□□ 2.08
CCDC17-201ENST00000372044 NUP153P49790 1475 aaKnown RBP28.03■■■□□ 2.08
CCDC17-201ENST00000372044 MAGI3Q5TCQ9 1506 aa28.02■■■□□ 2.08
CCDC17-201ENST00000372044 CCDC18Q5T9S5 1454 aa28.01■■■□□ 2.07
CCDC17-201ENST00000372044 ARID3CA6NKF2 412 aa28■■■□□ 2.07
CCDC17-201ENST00000372044 ABCA8O94911 1581 aa27.99■■■□□ 2.07
CCDC17-201ENST00000372044 PTPRGP23470 1445 aa27.92■■■□□ 2.06
CCDC17-201ENST00000372044 EHBP1L1Q8N3D4 1523 aa27.91■■■□□ 2.06
CCDC17-201ENST00000372044 MTUS2Q5JR59 1369 aa27.91■■■□□ 2.06
CCDC17-201ENST00000372044 SUPT6HQ7KZ85 1726 aaKnown RBP27.89■■■□□ 2.06
CCDC17-201ENST00000372044 PHLDB1Q86UU1 1377 aa27.89■■■□□ 2.06
CCDC17-201ENST00000372044 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
CCDC17-201ENST00000372044 RRBP1Q9P2E9 1410 aaKnown RBP27.86■■■□□ 2.05
CCDC17-201ENST00000372044 NCOA2Q15596 1464 aa27.81■■■□□ 2.04
CCDC17-201ENST00000372044 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
CCDC17-201ENST00000372044 ATP10BO94823 1461 aa27.78■■■□□ 2.04
CCDC17-201ENST00000372044 UACAQ9BZF9 1416 aa27.77■■■□□ 2.04
CCDC17-201ENST00000372044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
CCDC17-201ENST00000372044 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
CCDC17-201ENST00000372044 CCNB3Q8WWL7 1395 aa27.76■■■□□ 2.03
CCDC17-201ENST00000372044 ABCC2Q92887 1545 aa27.74■■■□□ 2.03
CCDC17-201ENST00000372044 KIF14Q15058 1648 aa27.71■■■□□ 2.03
CCDC17-201ENST00000372044 ADCY10Q96PN6 1610 aa27.7■■■□□ 2.02
CCDC17-201ENST00000372044 TROQ12816 1431 aaPredicted RBP27.68■■■□□ 2.02
CCDC17-201ENST00000372044 MYOM3Q5VTT5 1437 aa27.66■■■□□ 2.02
CCDC17-201ENST00000372044 FGD6Q6ZV73 1430 aa27.66■■■□□ 2.02
CCDC17-201ENST00000372044 ZCCHC11Q5TAX3 1644 aaKnown RBP27.65■■■□□ 2.02
CCDC17-201ENST00000372044 CDK11AQ9UQ88 783 aaPredicted RBP27.64■■■□□ 2.01
CCDC17-201ENST00000372044 UHRF1BP1LA0JNW5 1464 aa27.62■■■□□ 2.01
CCDC17-201ENST00000372044 PTPN23Q9H3S7 1636 aa27.61■■■□□ 2.01
CCDC17-201ENST00000372044 FAM50AQ14320 339 aaKnown RBP27.58■■■□□ 2.01
CCDC17-201ENST00000372044 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
CCDC17-201ENST00000372044 KDM5BQ9UGL1 1544 aa27.56■■■□□ 2
CCDC17-201ENST00000372044 ITGAEP38570 1179 aa27.55■■■□□ 2
CCDC17-201ENST00000372044 PLEKHD1A6NEE1 506 aa27.55■■■□□ 2
CCDC17-201ENST00000372044 ITSN2Q9NZM3 1697 aa27.53■■■□□ 2
CCDC17-201ENST00000372044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.5■■□□□ 1.99
CCDC17-201ENST00000372044 ABCC10Q5T3U5 1492 aa27.5■■□□□ 1.99
CCDC17-201ENST00000372044 TCOF1Q13428 1488 aaKnown RBP27.49■■□□□ 1.99
CCDC17-201ENST00000372044 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
CCDC17-201ENST00000372044 MIA2Q96PC5 1412 aa27.46■■□□□ 1.99
CCDC17-201ENST00000372044 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
CCDC17-201ENST00000372044 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
CCDC17-201ENST00000372044 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
CCDC17-201ENST00000372044 HRCP23327 699 aa27.45■■□□□ 1.99
CCDC17-201ENST00000372044 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
CCDC17-201ENST00000372044 CDC42BPBQ9Y5S2 1711 aa27.43■■□□□ 1.98
CCDC17-201ENST00000372044 PTPRKQ15262 1439 aa27.42■■□□□ 1.98
CCDC17-201ENST00000372044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.4■■□□□ 1.98
CCDC17-201ENST00000372044 ZNF644Q9H582 1327 aaPredicted RBP27.38■■□□□ 1.97
CCDC17-201ENST00000372044 PREX2Q70Z35 1606 aa27.38■■□□□ 1.97
CCDC17-201ENST00000372044 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
CCDC17-201ENST00000372044 CAMSAP2Q08AD1 1489 aa27.34■■□□□ 1.97
CCDC17-201ENST00000372044 DNMT1P26358 1616 aaKnown RBP27.33■■□□□ 1.97
CCDC17-201ENST00000372044 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
CCDC17-201ENST00000372044 CFDP1Q9UEE9 299 aaPredicted RBP27.32■■□□□ 1.96
CCDC17-201ENST00000372044 WDR7Q9Y4E6 1490 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms