RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
TSPAN1-201ENST00000372003 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
TSPAN1-201ENST00000372003 NUP160Q12769 1436 aa17.92■□□□□ 0.46
TSPAN1-201ENST00000372003 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
TSPAN1-201ENST00000372003 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
TSPAN1-201ENST00000372003 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
TSPAN1-201ENST00000372003 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
TSPAN1-201ENST00000372003 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
TSPAN1-201ENST00000372003 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.44
TSPAN1-201ENST00000372003 KIF21BO75037 1637 aa17.81■□□□□ 0.44
TSPAN1-201ENST00000372003 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
TSPAN1-201ENST00000372003 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
TSPAN1-201ENST00000372003 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
TSPAN1-201ENST00000372003 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
TSPAN1-201ENST00000372003 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
TSPAN1-201ENST00000372003 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
TSPAN1-201ENST00000372003 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
TSPAN1-201ENST00000372003 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
TSPAN1-201ENST00000372003 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
TSPAN1-201ENST00000372003 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
TSPAN1-201ENST00000372003 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
TSPAN1-201ENST00000372003 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
TSPAN1-201ENST00000372003 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
TSPAN1-201ENST00000372003 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
TSPAN1-201ENST00000372003 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
TSPAN1-201ENST00000372003 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
TSPAN1-201ENST00000372003 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
TSPAN1-201ENST00000372003 DISP1Q96F81 1524 aa17.63■□□□□ 0.41
TSPAN1-201ENST00000372003 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
TSPAN1-201ENST00000372003 PTPRGP23470 1445 aa17.59■□□□□ 0.41
TSPAN1-201ENST00000372003 KIAA0556O60303 1618 aa17.56■□□□□ 0.4
TSPAN1-201ENST00000372003 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
TSPAN1-201ENST00000372003 CLIP1P30622 1438 aa17.52■□□□□ 0.4
TSPAN1-201ENST00000372003 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
TSPAN1-201ENST00000372003 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
TSPAN1-201ENST00000372003 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
TSPAN1-201ENST00000372003 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
TSPAN1-201ENST00000372003 UACAQ9BZF9 1416 aa17.45■□□□□ 0.38
TSPAN1-201ENST00000372003 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
TSPAN1-201ENST00000372003 ARID3CA6NKF2 412 aa17.44■□□□□ 0.38
TSPAN1-201ENST00000372003 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
TSPAN1-201ENST00000372003 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
TSPAN1-201ENST00000372003 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSPAN1-201ENST00000372003 FMN1Q68DA7 1419 aa17.39■□□□□ 0.37
TSPAN1-201ENST00000372003 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
TSPAN1-201ENST00000372003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
TSPAN1-201ENST00000372003 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
TSPAN1-201ENST00000372003 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
TSPAN1-201ENST00000372003 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
TSPAN1-201ENST00000372003 ABCA8O94911 1581 aa17.35■□□□□ 0.37
TSPAN1-201ENST00000372003 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
TSPAN1-201ENST00000372003 NUP153P49790 1475 aaKnown RBP17.29■□□□□ 0.36
TSPAN1-201ENST00000372003 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
TSPAN1-201ENST00000372003 ATP10BO94823 1461 aa17.28■□□□□ 0.36
TSPAN1-201ENST00000372003 CASKIN1Q8WXD9 1431 aa17.28■□□□□ 0.36
TSPAN1-201ENST00000372003 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
TSPAN1-201ENST00000372003 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.35
TSPAN1-201ENST00000372003 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
TSPAN1-201ENST00000372003 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
TSPAN1-201ENST00000372003 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
TSPAN1-201ENST00000372003 ASXL2Q76L83 1435 aa17.23■□□□□ 0.35
TSPAN1-201ENST00000372003 MYT1Q01538 1121 aa17.23■□□□□ 0.35
TSPAN1-201ENST00000372003 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
TSPAN1-201ENST00000372003 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
TSPAN1-201ENST00000372003 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
TSPAN1-201ENST00000372003 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
TSPAN1-201ENST00000372003 CDK13Q14004 1512 aaKnown RBP17.22■□□□□ 0.35
TSPAN1-201ENST00000372003 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
TSPAN1-201ENST00000372003 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
TSPAN1-201ENST00000372003 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
TSPAN1-201ENST00000372003 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
TSPAN1-201ENST00000372003 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
TSPAN1-201ENST00000372003 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
TSPAN1-201ENST00000372003 APLP2Q06481 763 aa17.16■□□□□ 0.34
TSPAN1-201ENST00000372003 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
TSPAN1-201ENST00000372003 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
TSPAN1-201ENST00000372003 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
TSPAN1-201ENST00000372003 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
TSPAN1-201ENST00000372003 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
TSPAN1-201ENST00000372003 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
TSPAN1-201ENST00000372003 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
TSPAN1-201ENST00000372003 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
TSPAN1-201ENST00000372003 TROQ12816 1431 aaPredicted RBP17.07■□□□□ 0.32
TSPAN1-201ENST00000372003 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
TSPAN1-201ENST00000372003 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
TSPAN1-201ENST00000372003 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
TSPAN1-201ENST00000372003 CD109Q6YHK3 1445 aa17.02■□□□□ 0.32
TSPAN1-201ENST00000372003 GLI2P10070 1586 aa17■□□□□ 0.31
TSPAN1-201ENST00000372003 LRRC9Q6ZRR7 1453 aa17■□□□□ 0.31
TSPAN1-201ENST00000372003 MAP3K1Q13233 1512 aa17■□□□□ 0.31
TSPAN1-201ENST00000372003 KIF13AQ9H1H9 1805 aa16.99■□□□□ 0.31
TSPAN1-201ENST00000372003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
TSPAN1-201ENST00000372003 KIF14Q15058 1648 aa16.98■□□□□ 0.31
TSPAN1-201ENST00000372003 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
TSPAN1-201ENST00000372003 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
TSPAN1-201ENST00000372003 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
TSPAN1-201ENST00000372003 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.3
TSPAN1-201ENST00000372003 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
TSPAN1-201ENST00000372003 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
TSPAN1-201ENST00000372003 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms