RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
COL5A1-202ENST00000371820 IGF1RP08069 1367 aa17.58■□□□□ 0.4
COL5A1-202ENST00000371820 KIF13AQ9H1H9 1805 aa17.57■□□□□ 0.4
COL5A1-202ENST00000371820 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
COL5A1-202ENST00000371820 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
COL5A1-202ENST00000371820 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
COL5A1-202ENST00000371820 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
COL5A1-202ENST00000371820 CARMIL1Q5VZK9 1371 aa17.46■□□□□ 0.39
COL5A1-202ENST00000371820 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
COL5A1-202ENST00000371820 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL5A1-202ENST00000371820 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
COL5A1-202ENST00000371820 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
COL5A1-202ENST00000371820 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
COL5A1-202ENST00000371820 PTPRGP23470 1445 aa17.38■□□□□ 0.37
COL5A1-202ENST00000371820 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
COL5A1-202ENST00000371820 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
COL5A1-202ENST00000371820 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
COL5A1-202ENST00000371820 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
COL5A1-202ENST00000371820 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
COL5A1-202ENST00000371820 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
COL5A1-202ENST00000371820 KDM6BO15054 1643 aa17.3■□□□□ 0.36
COL5A1-202ENST00000371820 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
COL5A1-202ENST00000371820 TSPOAP1O95153 1857 aa17.28■□□□□ 0.36
COL5A1-202ENST00000371820 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
COL5A1-202ENST00000371820 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
COL5A1-202ENST00000371820 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
COL5A1-202ENST00000371820 UACAQ9BZF9 1416 aa17.26■□□□□ 0.35
COL5A1-202ENST00000371820 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
COL5A1-202ENST00000371820 GLI2P10070 1586 aa17.24■□□□□ 0.35
COL5A1-202ENST00000371820 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
COL5A1-202ENST00000371820 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
COL5A1-202ENST00000371820 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
COL5A1-202ENST00000371820 ZCCHC11Q5TAX3 1644 aaKnown RBP17.19■□□□□ 0.34
COL5A1-202ENST00000371820 EEA1Q15075 1411 aa17.17■□□□□ 0.34
COL5A1-202ENST00000371820 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
COL5A1-202ENST00000371820 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
COL5A1-202ENST00000371820 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
COL5A1-202ENST00000371820 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
COL5A1-202ENST00000371820 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
COL5A1-202ENST00000371820 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
COL5A1-202ENST00000371820 ABCA8O94911 1581 aa17.1■□□□□ 0.33
COL5A1-202ENST00000371820 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
COL5A1-202ENST00000371820 TEX14Q8IWB6 1497 aa17.09■□□□□ 0.33
COL5A1-202ENST00000371820 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
COL5A1-202ENST00000371820 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
COL5A1-202ENST00000371820 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
COL5A1-202ENST00000371820 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
COL5A1-202ENST00000371820 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
COL5A1-202ENST00000371820 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
COL5A1-202ENST00000371820 KIF21BO75037 1637 aa16.97■□□□□ 0.31
COL5A1-202ENST00000371820 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
COL5A1-202ENST00000371820 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
COL5A1-202ENST00000371820 ATP10BO94823 1461 aa16.93■□□□□ 0.3
COL5A1-202ENST00000371820 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
COL5A1-202ENST00000371820 RAPGEF6Q8TEU7 1601 aa16.9■□□□□ 0.3
COL5A1-202ENST00000371820 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
COL5A1-202ENST00000371820 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
COL5A1-202ENST00000371820 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
COL5A1-202ENST00000371820 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
COL5A1-202ENST00000371820 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
COL5A1-202ENST00000371820 NUP153P49790 1475 aaKnown RBP16.84■□□□□ 0.29
COL5A1-202ENST00000371820 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
COL5A1-202ENST00000371820 PHLDB1Q86UU1 1377 aa16.8■□□□□ 0.28
COL5A1-202ENST00000371820 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
COL5A1-202ENST00000371820 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
COL5A1-202ENST00000371820 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-202ENST00000371820 NEO1Q92859 1461 aa16.78■□□□□ 0.28
COL5A1-202ENST00000371820 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
COL5A1-202ENST00000371820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
COL5A1-202ENST00000371820 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
COL5A1-202ENST00000371820 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
COL5A1-202ENST00000371820 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
COL5A1-202ENST00000371820 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
COL5A1-202ENST00000371820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL5A1-202ENST00000371820 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
COL5A1-202ENST00000371820 TTC37Q6PGP7 1564 aa16.68■□□□□ 0.26
COL5A1-202ENST00000371820 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
COL5A1-202ENST00000371820 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
COL5A1-202ENST00000371820 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
COL5A1-202ENST00000371820 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
COL5A1-202ENST00000371820 FANCAO15360 1455 aa16.66■□□□□ 0.26
COL5A1-202ENST00000371820 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
COL5A1-202ENST00000371820 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
COL5A1-202ENST00000371820 DENND4BO75064 1496 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-202ENST00000371820 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
COL5A1-202ENST00000371820 AKNAQ7Z591 1439 aa16.64■□□□□ 0.25
COL5A1-202ENST00000371820 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
COL5A1-202ENST00000371820 PTPRMP28827 1452 aa16.63■□□□□ 0.25
COL5A1-202ENST00000371820 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
COL5A1-202ENST00000371820 MADDQ8WXG6 1647 aa16.61■□□□□ 0.25
COL5A1-202ENST00000371820 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-202ENST00000371820 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
COL5A1-202ENST00000371820 PLCH2O75038 1416 aa16.56■□□□□ 0.24
COL5A1-202ENST00000371820 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-202ENST00000371820 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-202ENST00000371820 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
COL5A1-202ENST00000371820 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
COL5A1-202ENST00000371820 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
COL5A1-202ENST00000371820 MYO5CQ9NQX4 1742 aa16.54■□□□□ 0.24
COL5A1-202ENST00000371820 YEATS2Q9ULM3 1422 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms