RNA–Protein interactions for RNA: ENST00000371717.7

PMPCA-201, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCA, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-201ENST00000371717 MAP3K1Q13233 1512 aa30.61■■■□□ 2.49
PMPCA-201ENST00000371717 RAD54L2Q9Y4B4 1467 aa30.61■■■□□ 2.49
PMPCA-201ENST00000371717 POLA1P09884 1462 aaPredicted RBP30.57■■■□□ 2.48
PMPCA-201ENST00000371717 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
PMPCA-201ENST00000371717 IGF1RP08069 1367 aa30.52■■■□□ 2.48
PMPCA-201ENST00000371717 TIAM1Q13009 1591 aa30.49■■■□□ 2.47
PMPCA-201ENST00000371717 RAB3GAP2Q9H2M9 1393 aa30.41■■■□□ 2.46
PMPCA-201ENST00000371717 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
PMPCA-201ENST00000371717 MAPKBP1O60336 1514 aa30.38■■■□□ 2.45
PMPCA-201ENST00000371717 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
PMPCA-201ENST00000371717 LRRC9Q6ZRR7 1453 aa30.36■■■□□ 2.45
PMPCA-201ENST00000371717 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
PMPCA-201ENST00000371717 SETD5Q9C0A6 1442 aa30.33■■■□□ 2.45
PMPCA-201ENST00000371717 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
PMPCA-201ENST00000371717 MRC2Q9UBG0 1479 aa30.3■■■□□ 2.44
PMPCA-201ENST00000371717 ITGAEP38570 1179 aa30.29■■■□□ 2.44
PMPCA-201ENST00000371717 SUPT16HQ9Y5B9 1047 aaKnown RBP30.28■■■□□ 2.44
PMPCA-201ENST00000371717 CFAP43Q8NDM7 1665 aa30.26■■■□□ 2.44
PMPCA-201ENST00000371717 PHLDB1Q86UU1 1377 aa30.22■■■□□ 2.43
PMPCA-201ENST00000371717 ERCC6Q03468 1493 aa30.22■■■□□ 2.43
PMPCA-201ENST00000371717 TIMELESSQ9UNS1 1208 aa30.19■■■□□ 2.42
PMPCA-201ENST00000371717 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
PMPCA-201ENST00000371717 GAPVD1Q14C86 1478 aa30.15■■■□□ 2.42
PMPCA-201ENST00000371717 PCF11O94913 1555 aaKnown RBP30.15■■■□□ 2.42
PMPCA-201ENST00000371717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.13■■■□□ 2.41
PMPCA-201ENST00000371717 TARBP1Q13395 1621 aaKnown RBP30.13■■■□□ 2.41
PMPCA-201ENST00000371717 EFCAB5A4FU69 1503 aa30.1■■■□□ 2.41
PMPCA-201ENST00000371717 FYCO1Q9BQS8 1478 aa30.09■■■□□ 2.41
PMPCA-201ENST00000371717 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.419e-7■■■■■ 27.9
PMPCA-201ENST00000371717 ABCA5Q8WWZ7 1642 aa30.08■■■□□ 2.41
PMPCA-201ENST00000371717 WDR62O43379 1518 aa30.06■■■□□ 2.4
PMPCA-201ENST00000371717 FAM50AQ14320 339 aaKnown RBP30.05■■■□□ 2.4
PMPCA-201ENST00000371717 CASKIN1Q8WXD9 1431 aa30.03■■■□□ 2.4
PMPCA-201ENST00000371717 CUL7Q14999 1698 aa29.99■■■□□ 2.39
PMPCA-201ENST00000371717 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
PMPCA-201ENST00000371717 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
PMPCA-201ENST00000371717 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
PMPCA-201ENST00000371717 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
PMPCA-201ENST00000371717 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
PMPCA-201ENST00000371717 PPP1R15AO75807 674 aaPredicted RBP29.93■■■□□ 2.38
PMPCA-201ENST00000371717 P3H3Q8IVL6 736 aa29.93■■■□□ 2.38
PMPCA-201ENST00000371717 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
PMPCA-201ENST00000371717 DDX10Q13206 875 aaKnown RBP29.91■■■□□ 2.38
PMPCA-201ENST00000371717 CTTNBP2Q8WZ74 1663 aa29.9■■■□□ 2.38
PMPCA-201ENST00000371717 FMN1Q68DA7 1419 aa29.89■■■□□ 2.37
PMPCA-201ENST00000371717 TSHZ2Q9NRE2 1034 aa29.86■■■□□ 2.37
PMPCA-201ENST00000371717 FGD6Q6ZV73 1430 aa29.85■■■□□ 2.37
PMPCA-201ENST00000371717 CCER2I3L3R5 266 aa29.85■■■□□ 2.37
PMPCA-201ENST00000371717 ATP1B4Q9UN42 357 aaPredicted RBP29.85■■■□□ 2.37
PMPCA-201ENST00000371717 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
PMPCA-201ENST00000371717 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
PMPCA-201ENST00000371717 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
PMPCA-201ENST00000371717 HFM1A2PYH4 1435 aa29.78■■■□□ 2.36
PMPCA-201ENST00000371717 CCDC18Q5T9S5 1454 aa29.75■■■□□ 2.35
PMPCA-201ENST00000371717 UACAQ9BZF9 1416 aa29.75■■■□□ 2.35
PMPCA-201ENST00000371717 ANP32CO43423 234 aa29.73■■■□□ 2.35
PMPCA-201ENST00000371717 TONSLQ96HA7 1378 aa29.72■■■□□ 2.35
PMPCA-201ENST00000371717 SAMD9Q5K651 1589 aa29.71■■■□□ 2.35
PMPCA-201ENST00000371717 MTUS2Q5JR59 1369 aa29.7■■■□□ 2.35
PMPCA-201ENST00000371717 PTPN23Q9H3S7 1636 aa29.7■■■□□ 2.34
PMPCA-201ENST00000371717 ADAMTS12P58397 1594 aa29.7■■■□□ 2.34
PMPCA-201ENST00000371717 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
PMPCA-201ENST00000371717 PTPRKQ15262 1439 aa29.64■■■□□ 2.34
PMPCA-201ENST00000371717 FKBP8Q14318 412 aa29.64■■■□□ 2.34
PMPCA-201ENST00000371717 MYOM3Q5VTT5 1437 aa29.64■■■□□ 2.34
PMPCA-201ENST00000371717 NAIPQ13075 1403 aa29.62■■■□□ 2.33
PMPCA-201ENST00000371717 NCOA2Q15596 1464 aa29.61■■■□□ 2.33
PMPCA-201ENST00000371717 NEFLP07196 543 aa29.6■■■□□ 2.33
PMPCA-201ENST00000371717 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
PMPCA-201ENST00000371717 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
PMPCA-201ENST00000371717 FBLN2P98095 1184 aa29.59■■■□□ 2.33
PMPCA-201ENST00000371717 LRRIQ1Q96JM4 1722 aa29.58■■■□□ 2.33
PMPCA-201ENST00000371717 HIRIP3Q9BW71 556 aaPredicted RBP29.58■■■□□ 2.33
PMPCA-201ENST00000371717 CHMP7Q8WUX9 453 aaPredicted RBP29.55■■■□□ 2.32
PMPCA-201ENST00000371717 BCANQ96GW7 911 aa29.52■■■□□ 2.32
PMPCA-201ENST00000371717 ARHGEF11O15085 1522 aa29.52■■■□□ 2.32
PMPCA-201ENST00000371717 KDM5BQ9UGL1 1544 aa29.51■■■□□ 2.31
PMPCA-201ENST00000371717 UGGT2Q9NYU1 1516 aa29.5■■■□□ 2.31
PMPCA-201ENST00000371717 ANP32EQ9BTT0 268 aa29.49■■■□□ 2.31
PMPCA-201ENST00000371717 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
PMPCA-201ENST00000371717 MAGI1Q96QZ7 1491 aaPredicted RBP29.47■■■□□ 2.31
PMPCA-201ENST00000371717 TRIM52Q96A61 297 aa29.47■■■□□ 2.31
PMPCA-201ENST00000371717 TCOF1Q13428 1488 aaKnown RBP29.46■■■□□ 2.31
PMPCA-201ENST00000371717 IQGAP2Q13576 1575 aa29.46■■■□□ 2.31
PMPCA-201ENST00000371717 AKNAQ7Z591 1439 aa29.44■■■□□ 2.3
PMPCA-201ENST00000371717 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
PMPCA-201ENST00000371717 GCC2Q8IWJ2 1684 aa29.41■■■□□ 2.3
PMPCA-201ENST00000371717 HECW1Q76N89 1606 aa29.4■■■□□ 2.3
PMPCA-201ENST00000371717 KIAA0586Q9BVV6 1533 aa29.38■■■□□ 2.29
PMPCA-201ENST00000371717 MAGI3Q5TCQ9 1506 aa29.36■■■□□ 2.29
PMPCA-201ENST00000371717 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
PMPCA-201ENST00000371717 DENND4BO75064 1496 aaPredicted RBP29.3■■■□□ 2.28
PMPCA-201ENST00000371717 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
PMPCA-201ENST00000371717 RBM19Q9Y4C8 960 aaKnown RBP29.26■■■□□ 2.28
PMPCA-201ENST00000371717 HSPA5P11021 654 aaKnown RBP29.26■■■□□ 2.27
PMPCA-201ENST00000371717 WASHC2AQ641Q2 1341 aa29.25■■■□□ 2.27
PMPCA-201ENST00000371717 RRP7BPQ9NSQ0 103 aa29.25■■■□□ 2.27
PMPCA-201ENST00000371717 EPRSP07814 1512 aaKnown RBP29.23■■■□□ 2.27
PMPCA-201ENST00000371717 ARID3CA6NKF2 412 aa29.23■■■□□ 2.27
PMPCA-201ENST00000371717 DISP1Q96F81 1524 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms